G127098


Basic Information

Item Value
gene id G127098
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17410685 ~ 17411593 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187696
TCTCAATCGATCCACAAATTATGATGCATTCCAATATTCTAAGAATCGATCCATGAATTgcgatgcatttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaataaatctctgAATCGATTCACAAATCGCGATGCATCAATTCTTTGTCCCGGCCCTAATAAAGATCATGTAAGCATAAGTGTAATACGACGTGTACTCCACGATGAAAGGCAGCCGCAGAGCGTAGAGCGCTCAGATGTTGGTCAGGACGTCGCTGGTAGTGAGGCTGACCGACACCACACCTGGAAGTTCGTTGTTCTGCCGGTTGGCTTTGTCCCGCAGGCGGAGCGTGTGAAGCTGCTGCAGGTCGGACAGATCGCCGCTCAGGACCGCCTGACCCATGAACGAGTCTTTCAGGAGGTTCTTGTTGTAGA
>TU187697
AATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaaataaatctaggAATCGATTCACGAATCgcgatgcatttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaataaatctctgAATCGATTCACAAATCGCGATGCATCAATTCTTTGTCCCGGCCCTAATAAAGATCATGTAAGCATAAGTGTAATACGACGTGTACTCCACGATGAAAGGCAGCCGCAGAGCGTAGAGCGCTCAGATGTTGGTCAGGACGTCGCTGGTAGTGAGGCTGACCGACACCACACCTGGAAGTTCGTTGTTCTGCCGGTTGGCTTTGTCCCGCAGGCGGAGCGTGTGAAGCTGCTGCAGGTCGGACAGATCGCCGCTCAGGACCGCCTGACCCATGAACGAGTCTTTCAGGAGGTTCTTGTTGTAGA
>TU187698
AATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataaatctaggAATCGATTCACGAATCgcgatgcatttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctcgGAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaataaatctctgAATCGATTCACAAATCGCGATGCATCAATTCTTTGTCCCGGCCCTAATAAAGATCATGTAAGCATAAGTGTAATACGACGTGTACTCCACGATGAAAGGCAGCCGCAGAGCGTAGAGCGCTCAGATGTTGGTCAGGACGTCGCTGGTAGTGAGGCTGACCGACACCACACCTGGAAGTTCGTTGTTCTGCCGGTTGGCTTTGTCCCGCAGGCGGAGCGTGTGAAGCTGCTGCAGGTCGGACAGATCGCCGCTCAGGACCGCCTGACCCATGAACGAGTCTTTCAGGAGGTTCTTGTTGTAGA
>TU187699
AATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaaataaatctaggAATCGATTCACGAATCgcgatgcatttttaataaatctctgAATCGATTCACAAATCGCGATGCATCAATTCTTTGTCCCGGCCCTAATAAAGATCATGTAAGCATAAGTGTAATACGACGTGTACTCCACGATGAAAGGCAGCCGCAGAGCGTAGAGCGCTCAGATGTTGGTCAGGACGTCGCTGGTAGTGAGGCTGACCGACACCACACCTGGAAGTTCGTTGTTCTGCCGGTTGGCTTTGTCCCGCAGGCGGAGCGTGTGAAGCTGCTGCAGGTCGGACAGATCGCCGCTCAGGACCGCCTGACCCATGAACGAGTCTTTCAGGAGGTTCTTGTTGTAGA
>TU187700
AATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcattttttaaataatctaggAATCGATTCACGAATCgcgatgcatttttaaataatctcggAATCGATTCACAAATCGCGATGCATCAATTCTTTGTCCCGGCCCTAATAAAGATCATGTAAGCATAAGTGTAATACGACGTGTACTCCACGATGAAAGGCAGCCGCAGAGCGTAGAGCGCTCAGATGTTGGTCAGGACGTCGCTGGTAGTGAGGCTGACCGACACCACACCTGGAAGTTCGTTGTTCTGCCGGTTGGCTTTGTCCCGCAGGCGGAGCGTGTGAAGCTGCTGCAGGTCGGACAGATCGCCGCTCAGGACCGCCTGACCCATGAACGAGTCTTTCAGGAGGTTCTTGTTGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187696 False 553 lncRNA 0.45 2 17410685 17411593
TU187697 False 582 lncRNA 0.44 2 17410866 17411593
TU187698 True 583 TUCP 0.44 2 17410866 17411593
TU187699 False 457 lncRNA 0.47 3 17410866 17411593
TU187700 False 415 lncRNA 0.48 3 17410866 17411593

Neighbor

gene id symbol gene type direction distance location
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding upstream 55837 17325966 ~ 17354848 (+)
LOC122362967 NA coding upstream 311123 17079059 ~ 17099562 (+)
LOC122362752 LOC107665215,LOC107595393 coding upstream 340866 17067094 ~ 17069819 (+)
LOC122363001 NA coding upstream 439321 16958824 ~ 16971364 (+)
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding upstream 581331 16819287 ~ 16829354 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 13561 17425154 ~ 17425977 (+)
LOC122322924 NA coding downstream 25558 17437151 ~ 17440065 (+)
lrch3 lrch3,LOC107735844 coding downstream 45497 17457090 ~ 17482180 (+)
LOC122362636 LOC107554234,LOC107665407,LOC107713070 coding downstream 86936 17498529 ~ 17500517 (+)
LOC122363047 unc13c coding downstream 143617 17555210 ~ 17693234 (+)
G126906 NA non-coding upstream 132100 17278206 ~ 17278585 (+)
G126903 NA non-coding upstream 153322 17256811 ~ 17257363 (+)
G126893 NA non-coding upstream 238380 17172005 ~ 17172305 (+)
LOC122362576 NA non-coding upstream 271550 17136635 ~ 17139135 (+)
G126881 NA non-coding upstream 377345 17031550 ~ 17033340 (+)
G127103 NA non-coding downstream 33368 17444961 ~ 17446064 (+)
G127110 NA non-coding downstream 37878 17449471 ~ 17449801 (+)
LOC122322999 NA non-coding downstream 104066 17515659 ~ 17520724 (+)
LOC122323095 NA non-coding downstream 110031 17521624 ~ 17527930 (+)
G127195 NA non-coding downstream 283741 17695334 ~ 17695593 (+)
LOC122322904 NA other upstream 101527 17303769 ~ 17309158 (+)
LOC122362575 NA other upstream 239350 17129922 ~ 17171335 (+)
G126884 ctxn2 other upstream 333526 17074194 ~ 17077159 (+)
G126820 NA other upstream 592286 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 1139418 16263839 ~ 16271267 (+)
serp1 NA other downstream 42561 17454154 ~ 17455657 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other downstream 397008 17808601 ~ 17814422 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other downstream 472025 17883618 ~ 17887211 (+)
G127258 NA other downstream 511335 17922928 ~ 17928165 (+)
G127292 NA other downstream 726942 18138535 ~ 18140253 (+)

Expression


Co-expression Network