G127242


Basic Information

Item Value
gene id G127242
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17854650 ~ 17855811 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187896
CTTTTGTTGTCGTCGTTGACCACAATATCAGCCCCTCCTGGTTTCAGCTCATGCTGGTGCGTCTGTGGAAGCCATCGGGTCAATATCACAGAAAAATACACAGAGCATACATCTTCAGGAAGTCTAGAGGACTTGATCTAAAGCTGATTTTCATTCGATTCTGTTCTTGTACCAGTCTGTTCCCTGCACAAAGCGTCTTGAAAATGTAAAGCGGAACAGGTCACCTGTCCAAAGAGCTCCTCGTCGATGGTGAACCTGAGGTCTAGATCTGTGGGGTCGTTCTCCAAAATCCATCGCAGGGAGTTGAAGTACTCGCTGTCCTGAAACAATGCAGCCAAAAACAACAGGCTGACGGGTGTTTGATACCTAATGACGACTAAACTAAAGCTCCACGGGACATTAAGCGCACCGTTAGTGTAACTAAATATAACTTGCACTTCTTAATTATTACCCAGAAGAcgttttttataatgaaatgctacgatatatacacatactatATAAAAGTGGTTTCCTAGCAGCTTTAATATgactaaaaagtattttttttaaaatgtaaatatagaaacaagatatttatatataaacaaaattaatgtatatgaaatatgtatatatacacatgcatacataattgtattcatatatgtcacttttgattaatttaatgccatcttactgaataaaagtaatcatttctgtattttactcACTCGCCAAAGACTTCACTGCTctgacacacacacacacacacacacgaatcaGAGCAGTGAAATCTGTGTGCGCgcaataaatgaaatttaaataaatatgagtgACTCTGCACTTCTACAACCTACTGAACATTTATAAAAgggcaaaatataattttctttcattacaatttaatgaaGTGAGTGTAGTTATTTATCATAACATAAACAGGGTATTTCATATTGAGTTCGATTTGATGATTTTGAGCCATTTGATGGTCACTGCACTGTGAAATACAGTATCTCACAGtcatatatatttgataaacgCACCACATCATGCAGGTGTTGCATGCAAAAGTGTttgtaatatacatattatatacattacaatatagtacatttctctctctctgagaaagACGTTTAGAGCTGATGCTGATT

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU187896 True 1136 lncRNA 0.36 2 17854650 17855811

Neighbor

gene id symbol gene type direction distance location
pigb pigb,LOC107600388,LOC107708293 coding upstream 77673 17769658 ~ 17776977 (+)
LOC122363047 unc13c coding upstream 161416 17555210 ~ 17693234 (+)
LOC122362636 LOC107554234,LOC107665407,LOC107713070 coding upstream 354133 17498529 ~ 17500517 (+)
lrch3 lrch3,LOC107735844 coding upstream 372470 17457090 ~ 17482180 (+)
LOC122322924 NA coding upstream 414585 17437151 ~ 17440065 (+)
LOC122323000 wtip,LOC107594378,LOC107600421,LOC107734993,LOC107712576,LOC107659186,LOC107662496 coding downstream 32156 17887967 ~ 17917268 (+)
LOC122362789 kiaa0355,LOC107594396,LOC107734949,LOC107668468,LOC107600920,LOC107712582 coding downstream 81219 17937030 ~ 17969461 (+)
LOC122362666 LOC107712581,LOC107668485,LOC107734866,LOC107659171 coding downstream 127667 17983478 ~ 18070581 (+)
pepd pepd coding downstream 421553 18277364 ~ 18334482 (+)
ugt5f1 LOC107709391 coding downstream 483332 18339143 ~ 18343857 (+)
G127240 NA non-coding upstream 2937 17818738 ~ 17851713 (+)
G127228 NA non-coding upstream 70947 17782598 ~ 17783703 (+)
G127208 NA non-coding upstream 103399 17750352 ~ 17751251 (+)
G127207 NA non-coding upstream 104474 17749391 ~ 17750176 (+)
G127195 NA non-coding upstream 159057 17695334 ~ 17695593 (+)
G127243 nedd4,LOC107735005,LOC107712575,LOC107659054 non-coding downstream 1201 17857012 ~ 17858149 (+)
G127263 NA non-coding downstream 116739 17972550 ~ 17974502 (+)
G127268 NA non-coding downstream 121864 17977675 ~ 17981341 (+)
G127413 NA non-coding downstream 495929 18351740 ~ 18352103 (+)
G127431 NA non-coding downstream 630046 18485857 ~ 18487271 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other upstream 40228 17808601 ~ 17814422 (+)
serp1 NA other upstream 398993 17454154 ~ 17455657 (+)
G127098 NA other upstream 443057 17410685 ~ 17411593 (+)
LOC122322904 NA other upstream 545492 17303769 ~ 17309158 (+)
LOC122362575 NA other upstream 683315 17129922 ~ 17171335 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other downstream 27807 17883618 ~ 17887211 (+)
G127258 NA other downstream 67117 17922928 ~ 17928165 (+)
G127292 NA other downstream 282724 18138535 ~ 18140253 (+)
G127456 rps3 other downstream 704152 18559963 ~ 18563152 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 790551 18646362 ~ 18652164 (+)

Expression


Co-expression Network