G127413


Basic Information

Item Value
gene id G127413
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18351740 ~ 18352103 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188151
CGTGTTTTGATTGACCTTTAAATGTTGGCTGCTGTATAGTTttaatagaaaactttttttatattaaaatactttattttaaaaattaaacaattacgTGATTATTGGtctatttagtttatataagAAGTATGTAgtaagcattttaattattaaacatttcgATAAGGATAGATAGAGAAGATGGCTACATAtgatagacatatatatatatatataaagatatagagatagatacag

Function

GO:

id name namespace
GO:0047173 phosphatidylcholine-retinol O-acyltransferase activity molecular_function
GO:0008374 O-acyltransferase activity molecular_function

KEGG:

id description
ko00830 Retinol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU188151 True 240 lncRNA 0.23 2 18351740 18352103

Neighbor

gene id symbol gene type direction distance location
ugt5f1 LOC107709391 coding upstream 7883 18339143 ~ 18343857 (+)
pepd pepd coding upstream 17258 18277364 ~ 18334482 (+)
LOC122362666 LOC107712581,LOC107668485,LOC107734866,LOC107659171 coding upstream 281159 17983478 ~ 18070581 (+)
LOC122362789 kiaa0355,LOC107594396,LOC107734949,LOC107668468,LOC107600920,LOC107712582 coding upstream 382279 17937030 ~ 17969461 (+)
LOC122323000 wtip,LOC107594378,LOC107600421,LOC107734993,LOC107712576,LOC107659186,LOC107662496 coding upstream 434472 17887967 ~ 17917268 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding downstream 41500 18393603 ~ 18460809 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding downstream 167888 18519991 ~ 18523564 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding downstream 192260 18544363 ~ 18546307 (+)
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding downstream 302515 18654618 ~ 18658740 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 1027932 19380035 ~ 19388663 (+)
G127268 NA non-coding upstream 370399 17977675 ~ 17981341 (+)
G127263 NA non-coding upstream 377238 17972550 ~ 17974502 (+)
G127233 NA non-coding upstream 417921 17794861 ~ 17933819 (+)
G127431 NA non-coding downstream 133754 18485857 ~ 18487271 (+)
G127434 NA non-coding downstream 139894 18491997 ~ 18518461 (+)
G127439 NA non-coding downstream 150338 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding downstream 175026 18527129 ~ 18528342 (+)
G127460 NA non-coding downstream 221716 18573819 ~ 18574354 (+)
G127292 NA other upstream 211487 18138535 ~ 18140253 (+)
G127258 NA other upstream 423575 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 464529 17883618 ~ 17887211 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other upstream 537318 17808601 ~ 17814422 (+)
serp1 NA other upstream 896083 17454154 ~ 17455657 (+)
G127456 rps3 other downstream 207860 18559963 ~ 18563152 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 294259 18646362 ~ 18652164 (+)
G127500 NA other downstream 378587 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 917508 19269611 ~ 19288556 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 1650901 20003004 ~ 20015706 (+)

Expression


Co-expression Network