G127431


Basic Information

Item Value
gene id G127431
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18485857 ~ 18487271 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188170
TGTGTTCGGGACGGGGTGCGATGATGGGTGGAGGCGTGGCTTCATCCTCGTCCTCATCCTCGGAGACGGTGGCCACGGCGGGGGTCTCGGAAACGGTCTTGGAGTTCTGCGGAGCGTGAAACAAGTCGAGCAGGAAGTGAGGCTGGCCGACTGACATCACAACATGAGTGCAAAACAAACCCAGCGCCAACATGCCAACCCTCAGCAGCTGACCCCGTACACCCCGAATAAATCTTCACGCCCCATCCTGCTCAACATCCACCCTGATTCGGTCCGAGCTACGGATACGCCACGACTCAGCAGGAGAATTGGACGAAAAAGATGCTGATTCACAagagagagagagagagagagagagagagatgaaccCACTGGCACTGCCTGGAGTATCTGGCATCACTTCTGTCCTTCTGTTGAGTGGGCAGCTCTTACGGGACTCTGTCACCTTGTTGTTCACTGCATCCCCACAGTCTCAGCTCTCGGTTCCCTCCTCTCTTTCGCACTCCCCCCCCAGCTAACTTCCTCCCGACCCATCCTCTGTCAATCTGTCGCGTGAGCCGAGAGGACATTTGTCCGCGTTCCCCTCCTGACCTCGACCGCTTCTCTCTGCGTGTCACAGATAAAACTGGAAAACAGTCGGACGTCACAATGACTCACCACTGCGTTGGAAGAGCTGTAGTTATCCGCACCtttatctgaaattaaaaacagacgAATGAGAAACACAAAGAGACAGTAGAACTGACTGGCAGACGCCACCTTATGGATATTACTTTCTAAACTGATGATTTATATAGGATTCGGTAGCTGATATATAATAGCTATGTACAGTGTCAAAGGCGTCAATGAAATTTACAAAAGTGactttatgtccatagaaagtaCTTTAACTGCAAGTAAAGCGTCTACTTTGgttcaaaaatatcaaaaattcaaacaacatgagGATGTGTAtttgatgcacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188170 True 979 lncRNA 0.50 2 18485857 18487271

Neighbor

gene id symbol gene type direction distance location
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding upstream 25048 18393603 ~ 18460809 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding upstream 98927 18339199 ~ 18386930 (+)
ugt5f1 LOC107709391 coding upstream 142000 18339143 ~ 18343857 (+)
pepd pepd coding upstream 151375 18277364 ~ 18334482 (+)
LOC122362666 LOC107712581,LOC107668485,LOC107734866,LOC107659171 coding upstream 415276 17983478 ~ 18070581 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding downstream 32720 18519991 ~ 18523564 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding downstream 57092 18544363 ~ 18546307 (+)
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding downstream 167347 18654618 ~ 18658740 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 892764 19380035 ~ 19388663 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding downstream 917050 19404321 ~ 19451211 (+)
G127413 NA non-coding upstream 133754 18351740 ~ 18352103 (+)
G127268 NA non-coding upstream 504516 17977675 ~ 17981341 (+)
G127263 NA non-coding upstream 511355 17972550 ~ 17974502 (+)
G127243 nedd4,LOC107735005,LOC107712575,LOC107659054 non-coding upstream 627708 17857012 ~ 17858149 (+)
G127242 NA non-coding upstream 630046 17854650 ~ 17855811 (+)
G127434 NA non-coding downstream 4726 18491997 ~ 18518461 (+)
G127439 NA non-coding downstream 15170 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding downstream 39858 18527129 ~ 18528342 (+)
G127460 NA non-coding downstream 86548 18573819 ~ 18574354 (+)
G127492 NA non-coding downstream 203294 18690565 ~ 18693231 (+)
G127292 NA other upstream 345604 18138535 ~ 18140253 (+)
G127258 NA other upstream 557692 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 598646 17883618 ~ 17887211 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other upstream 671435 17808601 ~ 17814422 (+)
serp1 NA other upstream 1030200 17454154 ~ 17455657 (+)
G127456 rps3 other downstream 72692 18559963 ~ 18563152 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 159091 18646362 ~ 18652164 (+)
G127500 NA other downstream 243419 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 782340 19269611 ~ 19288556 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 1515733 20003004 ~ 20015706 (+)

Expression


Co-expression Network