G127500


Basic Information

Item Value
gene id G127500
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18730690 ~ 18841535 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188266
aagatttTAATAGTTATTGAATGTTCTACAtcttacagtaaatattatacaattacaAACTTGGCTTAATTATGTCACAGAGATCACTAACtgatcttcaaaaacaaaacaaaacaataaaaaaaccccaaaataataaaaacagttttacactTCATTTCACAAGCCTGATGTGGGTCTCCTTGCTCAAAAGGTGGAACGGCACGGCCTGGGCCGCTCTGGCGCAAACGCGCTCGGACCCGCCAGAACCACGCGGGAACGAGATCTCCATGCCGCCAGAACCGCGCAGTCGTGCGTCATACATACTACGGGGGCAAGGGCTCTCGAAACACTCACTGAAGGGAGATAAATTCTGGAAGACTTTCCCCTTTTTTGCGTTACATTTAGAATGCAAACAACGAAGTCTTATTCTCCATACGGGTCAAACACAAATAGCTGTTTTCCTAAACAGTAGCGTGAAACAGCAACCCCTCGTTTGTTTGCGTCAAAGCCTATGGTACATATCACAGGTTCTCAGCAAGAGCGTGAAAGCAGTGCCACAATTACTTTAGAAATACCTTTACATACTGGTGACGTGACACTGACTTCACTAGAGCTAATAACCCGTTGCATGCATCACGGGCGCTAGTAAACAATCCTTTGATCGATGCCCTGAAACCAAAGAACAGAACAGTGCATGGGTTTGCAATAGCAACATCAAAATGATCCAAacggaaaaaaaactaaaaaaatacaaaaaaaaaaaccaaaaaaacaaaacaggaaactGAAGCCTCTTCCACGCCACCACCGGGTGAAAAAAACACCCAGAAAAAggatcagtttattttaaaatgggaGAAACGCATAAAAAACCCTCGCTAGTGTGATAATATCAGAGTATCGTAACTGTTTAAAAGGAAtaataaaggaataattcatccaaaaaaaaaaaaatgcaagttcTGTTATCAAtcggatttatttattttttttcaacgtttcatttttggatgatcCGTCCCTTTAAATTCGTGACGACCCTGCGTTAAAACGTCCTGCGCGCCTGTAACGTCAACGTATTCGCTCACAGCTAATTTTCGCCGAAAGCTCAGCCATTACTTCAATCGCTGAACTCTGTCCTCcttgaaaggaaaagaaaagaagaagagaaagaaagactggGGAAATGCGtgcagaggaagaggaaaccCTTTGAAGACTTGTGCTCTGAAATGCCTCTCAACCACATGGACTGTATCACTCCACTCCAGATCAACTATAAAGATCTcctatttaagaaaaatgaacatcaatcattaattaaaactttaaataacacTTACGTAAAAAGCGCCTAAATTACATGTCAGAGTGGATGGTAACGTCCTCTATTTCAGAATCAAAACCCTTATTCTTTTTGCGGTGTAAAAGGTCACTCTAGTCCTAGAGTTCAGAGTGTCATATGTCGACTACAGTGATTAAACGCATCGATCAAGTCTCGTGAGGCGAACGTATGCAAAGACACGGAAAATATAGTTCACTGCTTGATATAATACTGTATAAGACCAGAAAAGGAAAGAGCAGGGCAGAGAGCGCACGAAAATGACATCGAATGTCATCAGAACAGAGCATGAGAACGGTACGAGATTCTCATTCAATCATAAACAAGTGAGCTGATTGGACTGATCTGAATTACTTACTGAGGACAAAATTCCATCGTTagacaaatattacaaatacaaatgctGCTTACCGATACAACAGGAAAATGATTATTCTGCAATGATGAATCTCATGGAACCTgtcaagaatatatatatatatatatatatttttttatattaa
>TU188268
aagatttTAATAGTTATTGAATGTTCTACAtcttacagtaaatattatacaattacaAACTTGGCTTAATTATGTCACAGAGATCACTAACtgatcttcaaaaacaaaacaaaacaataaaaaaaccccaaaataataaaaacagttttacactTCATTTCACAAGCCTGATGTGGGTCTCCTTGCTCAAAAGGTGGAACGGCACGGCCTGGGCCGCTCTGGCGCAAACGCGCTCGGACCCGCCAGAACCACGCGGGAACGAGATCTCCATGCCGCCAGAACCGCGCAGTCGTGCGTCATACATACTACGGGGGCAAGGGCTCTCGAAACACTCACTGAAGGGAGATAAATTCTGGAAGACTTTCCCCTTTTTTGCGTTACATTTAGAATGCAAACAACGAAGTCTTATTCTCCATACGGGTCAAACACAAATAGCTGTTTTCCTAAACAGTAGCGTGAAACAGCAACCCCTCGTTTGTTTGCGTCAAAGCCTATGGTACATATCACAGGTTCTCAGCAAGAGCGTGAAAGCAGTGCCACAATTACTTTAGAAATACCTTTACATACTGGTGACGTGACACTGACTTCACTAGAGCTAATAACCCGTTGCATGCATCACGGGCGCTAGTAAACAATCCTTTGATCGATGCCCTGAAACCAAAGAACAGAACAGTGCATGGGTTTGCAATAGCAACATCAAAATGATCCAAacggaaaaaaaactaaaaaaatacaaaaaaaaaaaccaaaaaaacaaaacaggaaactGAAGCCTCTTCCACGCCACCACCGGGTGAAAAAAACACCCAGAAAAAggatcagtttattttaaaatgggaGAAACGCATAAAAAACCCTCGCTAGTGTGATAATATCAGAGTATCGTAACTGTTTAAAAGGAAtaataaaggaataattcatccaaaaaaaaaaaaatgcaagttcTGTTATCAAtcggatttatttattttttttcaacgtttcatttttggatgatcCGTCCCTTTAAATTCGTGACGACCCTGCGTTAAAACGTCCTGCGCGCCTGTAACGTCAACGTATTCGCTCACAGCTAATTTTCGCCGAAAGCTCAGCCATTACTTCAATCGCTGAACTCTGTCCTCcttgaaaggaaaagaaaagaagaagagaaagaaagactggGGAAATGCGtgcagaggaagaggaaaccCTTTGAAGACTTGTGCTCTGAAATGCCTCTCAACCACATGGACTGTATCACTCCACTCCAGATCAACTATAAAGATCTcctatttaagaaaaatgaacatcaatcattaattaaaactttaaataacacTTACGTAAAAAGCGCCTAAATTACATGTCAGAGTGGATGGTAACGTCCTCTATTTCAGAATCAAAACCCTTATTCTTTTTGCGGTGTAAAAGGTCACTCTAGTCCTAGAGTTCAGAGTGTCATATGTCGACTACAGTGATTAAACGCATCGATCAAGTCTCGTGAGGCGAACGTATGCAAAGACACGGAAAATATAGTTCACTGCTTGATATAATACTGTATAAGACCAGAAAAGGAAAGAGCAGGGCAGAGAGCGCACGAAAATGACATCGAATGTCATCAGAACAGAGCATGAGAACGGTACGAGATTCTCATTCAATCATAAACAAGTGAGCTGATTGGACTGATCTGAATTACTTACTGAGGACAAAATTCCATCGTTagacaaatattacaaatacaaatgctGCTTACCGATACAACAGGAAAATGATTATTCTGCAATGATGAATCTCATGGAACCTgtcaagaaatatatatatatatatatatatatatatatgcataaagaaaatgaagcctgtttaagatttaatattttttattattatctttatgACAATTTCCTCTTGAAATTTAGAGGAATATTTGTTGTACTGTCTTtgctgatgtaaaaaaaaaatcaaaccaaaaaaacccccacattGCAGAGATTTGTAAAAACGAACACTATTTAGAGTAATACgaataactatttaaataaaatagctatttaaaaaaagatgttttacagtaattttaagcaaaaaagaGGCTTCACTTAATTcatgtgatttatatatatatatatatatatatatatatatatatatacacaca
>TU188269
ATCTATCAGACCACATTTCAAAACACTACACGGTCATTTTTCACTTTCTGGTTTTTGTACATTGTTCTGGATTCTATTTTTTCCgaacttcatttaaatatttttttttacttcatttgcaaaaaatatagttcttaaaatcatgctttttaattataatattattttatcatgtttgtactgttttatatatatatatatatatatatatatatatatatatacacaccacgAGGTTCATGAGTCACTCTGCGCTCTCACTCTCTCCCTTTACTTTAACGAAAAATACATAAGGGAATGTgctgtaatgtaaatgtattattaaaagcaaTCCATAAGCTGCAATTCAACATGAAGCAACCATGCTTCGCAAGGGCATAGTTTCCATCTGATTACACTATACTGCATTCACCCGCATGACACATGCATTACTAGACGTTATGACTTTCACATAAGATCAGAGAATCGCTTCTTCCCACTTTTGAGTGTACTATATATCGCAATAGTGGTCGCTTAGCCAACAAAACAACGTAAAGAGTGATACTGTTCTGTACTGACAATAATATTACTTCCAGAGACATTACCAAGACTAATGGTCTGCAGAGTAAATGCTTGATTTTCTTAATTACATCATTAAATATGAGAGTGTACCGTATAATTGGTTATTAAGTTACGTCTATTTGTCAATGTGCAATGCTTCGGTATGATAACATTTCATAGAATACTTGATATGTCACTTCTGAGTACACTATTCATGGATACAGGCGAGGCCTTGGGATAGGAAATCAAgattctctttatctctctctctctaaaaatgctgtaaattacaattaaaagccATTCAAGCAGGCCGTTCGTATTATTGCATTGAACAACTCCGTTCCTACGCCTAAAATCTGTGCAACGACGGGCCTAAAGGCCCAAGGATTCACAGAGGACCAGGGGTCAGACCCACTCTAGACCCGGAGCTGATTGGAAATGAATGCCGGAACGCCATACCtccctcgtgtgtgtgtgtgtgcgtgtgtgtttttttgcttttagtgCTATCTACGATGTTGCAAAGTCCCTTTGAATCGGATTCGATCCTAATCGTTCCCGTCAGAGTAGCATCCGTCCTTTCTGGCCTCGAAGTTGGCACGCGTTTCGATGCCCGCGGGGACGACATCGCACCCAGAGGCTCCAGCTAAGTGCCAccgatacatttttttttttttttgtattcctcAATATTCACGGTGAGCGCATGCCGCGGGAGCACCCATGCGcgcacatttttataaatcgCATATACACGTTATAGTTTCGAAGCTTACGCTATCCTGACACATAAGCTAATAAAGTAACCGGCTCACTCAAACGTTCTCTATTTAGTGAATAACTAAGATTACTGTATGTACTCGATATCCTAATGAAGGTTAAACCACGTTTGCACTGCCCTACTAATGATATATTCCTTACAAATCTACATGAACAGCTACAAGCTGGAAGACACCCTTGTTATCGATGACAGAACGAAATGAAATTTTTCTGGAACCGTTCCCAAGCGCTTCGGGAAGGCCGAACTCAAAATCtctgctgtaaataaataaaaggaaaacgaCGAACCCTGTGCTAATATCTAAAGGTTATAAAATTTGGCAGCATAAGTGGATGATTATGATCCGAGTGGTGCTGATATTGCGTCGGTACATTCCTACACACCAGCGTTTTATACTGAACACAAAGACGGGTCGTGATTGGTCGAAATCATTCTGGAGCTCTTGTAGAATAACTATGGAACAATGAAGAATTAAAATATCCTAATGCAAGAACATCATcccaaaaaaaaatgagaaggaaaaaaacgCGAAAACGAAACGAAACGAAAAAGAacgaaattaaataaaaagataaaaaagcagcttttacAAAAACACGTAAGAATGCATAAAGTGACCCTTgcacttttttctctttttgttcttgCAAACAGACGTGGCGCCTCACTGTTGAGCACAGAGCGCCGATGTAAGACTTGAGTAGTTGCATACAATGTTTGACTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188266 False 1827 TUCP 0.39 2 18777768 18841535
TU188268 True 2140 TUCP 0.37 2 18777768 18782159
TU188269 False 2051 lncRNA 0.39 2 18730690 18781704

Neighbor

gene id symbol gene type direction distance location
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding upstream 71950 18654618 ~ 18658740 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 184383 18544363 ~ 18546307 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding upstream 207126 18519991 ~ 18523564 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding upstream 269881 18393603 ~ 18460809 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding upstream 343760 18339199 ~ 18386930 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 538500 19380035 ~ 19388663 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding downstream 562786 19404321 ~ 19451211 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding downstream 758477 19600012 ~ 19603818 (+)
LOC122362762 LOC101886557 coding downstream 782677 19624212 ~ 19625612 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding downstream 1043599 19885134 ~ 19901478 (+)
G127492 NA non-coding upstream 37459 18690565 ~ 18693231 (+)
G127460 NA non-coding upstream 156336 18573819 ~ 18574354 (+)
G127439 NA non-coding upstream 183967 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding upstream 202348 18527129 ~ 18528342 (+)
G127434 NA non-coding upstream 212229 18491997 ~ 18518461 (+)
LOC122362700 NA non-coding downstream 488787 19330322 ~ 19348479 (+)
LOC122323165 NA non-coding downstream 610995 19452530 ~ 19480221 (+)
LOC122323166 NA non-coding downstream 646035 19487570 ~ 19568485 (+)
G127617 NA non-coding downstream 734354 19575889 ~ 19576159 (+)
G127630 NA non-coding downstream 781478 19623013 ~ 19623282 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 78526 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 167538 18559963 ~ 18563152 (+)
G127292 NA other upstream 590437 18138535 ~ 18140253 (+)
G127258 NA other upstream 802525 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 843479 17883618 ~ 17887211 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 428076 19269611 ~ 19288556 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 1161469 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 1226143 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 1704457 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 1709613 20551148 ~ 20556627 (+)

Expression


Co-expression Network