glipr1b (glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196)


Basic Information

Item Value
gene id glipr1b
gene name glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20545992 ~ 20549357 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188799
GTGCATGCATCGTGTGTTTCAGTTAATGTGGTCTACGAGCTTCAAGCTGGGCTGTGCTGTAAACGTGTGCTCGAAAGGCATCGAAAACTTCTCTTCTCACCCGGAATCCACTATTTTTGTGTGCAACTACGGCGATACGGGACACGTTCATGGTGTTACTCCATACATAGCAGGTGTGGCGTGCAGCGGTTGTGGGTCAGAGACTTGCAGAGACAACGTCTGTAGATATGATTGGTTCCCTGGGTGGGACTATGGCCCGCCCTCTTCAGCCTACAGTATTTCCCACTGGCTGACTAATCTTGGACTGTATCTACTAGGAGTTTGCTGGCTACTCCACTTTTATGCAACACATTAATGTGATTCTGTGAACCCGTTCCCTAACGTCTCAAACTTGAACCTTAAAATTTGCATCTCTCCATAATTTCGGTATGGTTGGATATTAAATTAGCAatcactgaaataataataagaaatctgtctataaatatacatgtatatttttcttttctgctgtgtgtaaatcatttatttacttagttCCATAGGcctgtaaatgcatttagaaaaagaGAATTGGCATCATAAAA
>XM_043263997.1
CTGTAccgagaaagacagacagacaaacacagaaagagagggagagatagagAGTGGGCAAATCCACGGCACCATGACGCACGGGTCAGCGCGTCTCCTGCAGTGATGCTCCATTGACTCATTTATCCAGAGCGAAGCAGCAGCTCGGCTCAGGACGGTCTCCTGCCATGGACTCTCTCGGCGGTCTCCTCTTGCGGATATCGGTGCTTCTGTACGGCTCCTGCGGCGTTCTGGCGCTCCTCCCGGGAATCACGGAGCCCGAGTTCATCCGCAGGTGTGTGCTGGCGCATAACACGCAGCGCTCGCGCATCGTTCCACCTGTGGCCAGCGCGCGCTCAATGTCCTGGGACAAAGAACTGGCCAAAGGTGCCAGAGACCGAGCGAGACACTGCAGGGCCTCTCATCACCCTGGGCTGGCACACTTCGGGCACCCGCTGTTCGGGTGGATGGGCGAGAACATCTGGCTGGGGGCTCCGTTTTCAGCCTTCTCCGTGGAGAACGCCATACACAGATGGAGCAAAGAAGGAGCTTACTCGCTCAAAAATAACAACTGCTCACGCATGTGTGGCCACTACGCACAGTTAATGTGGTCTACGAGCTTCAAGCTGGGCTGTGCTGTAAACGTGTGCTCGAAAGGCATCGAAAACTTCTCTTCTCACCCGGAATCCACTATTTTTGTGTGCAACTACGGCGATACGGGACACGTTCATGGTGTTACTCCATACATAGCAGGTGTGGCGTGCAGCGGTTGTGGGTCAGAGACTTGCAGAGACAACGTCTGTAGATATGATTGGTTCCCTGGGTGGGACTATGGCCCGCCCTCTTCAGCCTACAGTATTTCCCACTGGCTGACTAATCTTGGACTGTATCTACTAGGAGTTTGCTGGCTACTCCACTTTTATGCAACACATTAATGTGATTCTGTGAACCCGTTCCCTAACGTCTCAAACTTGAACCTTAAAATTTGCATCTCTCCATAATTTCGGTATGGTTGGATATTAAATTAGCAatcactgaaataataataagaaatctgtctataaatatacatgtatatttttcttttctgctgtgtgtaaatcatttatttacttagttCCATAGGcctgtaaatgcatttagaaaaagaGAATTGGCATCATAAAAGTGCTAGTTGAATAAACTTATTGATATTTTATACTCTTA

Function

symbol description
glipr1b Predicted to be active in extracellular space. Orthologous to several human genes including GLIPR1 (GLI pathogenesis related 1) and GLIPR1L1 (GLIPR1 like 1).

NR:

description
PREDICTED: GLIPR1-like protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188799 False 587 TUCP 0.42 3 20547827 20549318
XM_043263997.1 True 1185 mRNA 0.49 5 20545992 20549357

Neighbor

gene id symbol gene type direction distance location
cers3b cers3b,LOC107559674,LOC107733272,LOC107662883,LOC107686553,LOC103029792 coding upstream 7374 20532906 ~ 20538618 (+)
LOC122323072 LOC107559655,LOC107686551,LOC107733270,LOC107662882,LOC107736185,LOC563500,LOC107600544 coding upstream 14413 20506031 ~ 20531579 (+)
vwf vwf,LOC107600553 coding upstream 41618 20471101 ~ 20504374 (+)
si:dkey-88e18.2 LOC107686617,LOC107733267,LOC107560122 coding upstream 100625 20440144 ~ 20445367 (+)
LOC122363067 LOC107559703,LOC107686559,LOC107662909,LOC107576256 coding upstream 123663 20414016 ~ 20422329 (+)
syt1b syt1b,LOC107686614,LOC107733268,LOC107560093,LOC107662864 coding downstream 12478 20561835 ~ 20565306 (+)
neto2b neto2b,LOC107710374,LOC107662839,LOC107599993 coding downstream 60580 20609937 ~ 20618180 (+)
arf5 arf5,zgc:77650,LOC108439765,LOC108439842,LOC107599983,LOC103033491,LOC107599973,LOC105912562 coding downstream 80386 20629743 ~ 20633636 (+)
zgc:77752 zgc:77752,LOC107710390,LOC107686544,LOC107559595,LOC107736252 coding downstream 98943 20648300 ~ 20653670 (+)
odf3b odf3b,LOC107686589,LOC107710372,LOC107559895 coding downstream 105175 20654532 ~ 20657823 (+)
G127785 NA non-coding upstream 162234 20325330 ~ 20383758 (+)
G127800 NA non-coding upstream 170157 20373854 ~ 20375835 (+)
G127780 NA non-coding upstream 264697 20256712 ~ 20281295 (+)
LOC122363139 NA non-coding upstream 321408 20221304 ~ 20224584 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding upstream 330761 20202748 ~ 20215231 (+)
G127860 NA non-coding downstream 12726 20562083 ~ 20572310 (+)
G127873 LOC107686547,LOC107710394,LOC107559637,LOC107600002,LOC107662879,LOC107735654 non-coding downstream 36694 20586051 ~ 20588863 (+)
LOC122363025 NA non-coding downstream 92408 20641765 ~ 20647708 (+)
LOC122362840 NA non-coding downstream 320518 20869875 ~ 20887115 (+)
G127935 NA non-coding downstream 345420 20894777 ~ 20937442 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 452391 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 530286 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 1257436 19269611 ~ 19288556 (+)
G127500 NA other upstream 1704457 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1893828 18646362 ~ 18652164 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 1791 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 40327 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 85488 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 1851587 22400944 ~ 22411957 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other downstream 1885449 22434806 ~ 22438679 (+)

Expression


Co-expression Network