CI01000001_02126257_02127537


Basic Information

Item Value
gene id CI01000001_02126257_02127537
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2125065 ~ 2127567 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_02126257_02127537.mRNA
ACGCTACATTTATCAGCCAGACAGTTGGATATGTCCACAAGCCTGTTTAGATATTTCTATTTTCGATTCGCCTGCGCCATTAGTCACCGAATTTGGCCGTGGTCCGCCGTTGAAAACGGGGGCCGTCGATCTGAGCTGGAGATGTTTGCGGAGCATAAGCTGCAGCCTGTTGACATTTTAAGAGAGGAGGCCCTTCTTTCCCTTCCCCGTGATTTAGAACGAGACTCAAATCCCCGAAGAGTCCGTCCCGCTGCGTTACATCTGCACACGCAATGCATTCGCAGATTCGCACACAAACAGCCTCTTTTAGCCGTGCACATCCGAACATCTGGTCTGCACCCTTGCAGCAACTTGAAAAGGCCCACAGCAGTGGTAGCAATTAAGCTTTATGACGTTTTTCTTTCGGATGCGTGTTCGCTCACTCATGTGGTCGTGTTTGGTCTTGTTCCACTCGAGTTTCACGGCTTACCGCTTGCAAAGCACTTTGATTTTCGGCCATTATGGGTTTCAGAAATGAATCTTTGGGTAACCAAAGAACGACAAGCAAATTTATGGCCGTGCTGTGATTCGACGCTGGCTGTCTTTGATGTGAGTTACCGCTCTGTTGCTTATGGGACACAGAAACGGTGTCAGGTTTCAATCGTAAAACCCTCTCCCCAAGGGAAGGAGCAGGGAGTGCTCGACATTCCTGACGTCATGAGAGCAGGAGGAGGAGGAAGAGAGAAAGAGAGAGAGGGAATGATTTGTAGCTGCAGTCATTTTCACTCACACAGGCCTGCTGCAGTTTCTTTGTGGAATGCGTTCACATCCAACTCTCCAACTCCAAAATAATATCCTGTTTCAACACCCGACGCTCAAAGAAAACATCTCATATGCGACGCAAAAATGTGGACGATCTGACCAGCCGATTCATCTCAATCAATGCACATCAGCAGTGTAAACACGACTGTCATCGCCGTATCCCATTACTGGGGTTGATGTTTGCTTACGATAAATTTGTGGCCTGCCACTGTCTGATAACCACCACATATAGGCCTATGTTATAATCCCCATGGTTAAATCCTCAGTGTGATTTGCTAAATAATGAGGCATTTAGACAAAAGTTGCATTCTCATTTCCCCCCCAGTTTGTATGAATTAAAGGGTTCACCCAAATTTGAAAATTCTGTCATTTATTACTCACCCTCATGTCATTCCACATCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATAATATCCGACGGCTCAGTGAGGCCTCCATTGACAGCAAGATCATTTCCTTTTTTAATGCCCAGAAAGGTAAAAACATATTTAAAACAGTTAATGTGAGTACAGTGATTCAACCTTAATATTATAAAGCAACGAGAATACTTTTTGAAGAGGAAAAAAACAGAAAAAACAACTTCATTCAACAATATCTAGTGATGGGCGATTTCAAAACACTGCTTCATGAAGCTTTATGAATCTTTTGTTTCGAATCAGTGGTTCGGAGCGCCAAAATCACATCATTTCAGTAAACGAGGCTTTGTTATGTCATAAGTGTTTCAAAATTTCAACAGTTCACATGACTTTGGCAGTTTGATACACGCTCTGAACCACTGATTCGAAACAAAAGATTCGTAAAGCTTCGAAGCTTCATGAAGCAGTGTTTTGAAATCGCCCATCACTAGATATTGTTGAATAAAGTAGTTTTTTTTTTTTTTTGGCACACAAAAAGTATTCTTGTCGCTTTATAATGTTAAGGTTGAACCACTGTAGTCACATGGACTGTTTTAAATATGTTATAAGTAGCTTTCTGGGCATTGAAAAAGGAAATGATCTTAACAAATTGTCACAGAAATTTATAAAACGGAAAGACTGACATTTAAGTTGAGATTACAAGAAGAGACTTTTGAAAAACACTGGGAAAAATGGACTACACATATATCAAAACAGAGAGAAAGGAGATAAATGTGTAACAGGAATACTTATATGCATACTTGTAACCACCATAAGAGAATAATAAA

Function

NR:

description
PREDICTED: zinc finger protein 740

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_02126257_02127537.mRNA True 2023 mRNA 0.41 3 2125065 2127567

Neighbor

gene id symbol gene type direction distance location
CI01000001_02057429_02071506 LIMA1A coding downstream 53559 2056814 ~ 2071506 (-)
CI01000001_01999489_02002753 IGFBP6B, IGFBP6 coding downstream 122137 1998128 ~ 2002928 (-)
CI01000001_01976950_01992032 GPR182, PIP4K2CA, PIP4K2C coding downstream 131504 1976716 ~ 1993561 (-)
CI01000001_01932927_01933914 TSPAN31 coding downstream 191151 1932621 ~ 1933914 (-)
CI01000001_01902970_01917410 MARCH9 coding downstream 207611 1902429 ~ 1917454 (-)
CI01000001_02141590_02142836 COPZ1, COPZ1.L, COPZ1-B coding upstream 13993 2141560 ~ 2142986 (-)
CI01000001_02159372_02162554 HNRNPA1, ROA1 coding upstream 31592 2159159 ~ 2162554 (-)
CI01000001_02173311_02179118 NA coding upstream 45203 2172770 ~ 2180987 (-)
CI01000001_02236985_02242725 HOXC1A coding upstream 109015 2236582 ~ 2243993 (-)
CI01000001_02258523_02262621 NA coding upstream 130875 2258442 ~ 2263103 (-)
G14293 NA non-coding downstream 6499 2118355 ~ 2118566 (-)
G14198 NA non-coding downstream 21596 2102589 ~ 2103469 (-)
G14216 NA non-coding downstream 22564 2102156 ~ 2102501 (-)
G14213 NA non-coding downstream 118016 2005295 ~ 2007049 (-)
G14217 NA non-coding downstream 120002 2004161 ~ 2005063 (-)
G14297 NA non-coding upstream 15574 2143141 ~ 2143365 (-)
G14300 NA non-coding upstream 21147 2148714 ~ 2148937 (-)
G14301 NA non-coding upstream 23559 2151126 ~ 2151456 (-)
G14304 NA non-coding upstream 26815 2154382 ~ 2154883 (-)
G14335 NA non-coding upstream 240291 2367858 ~ 2368107 (-)
G14228 NA other downstream 68587 2055974 ~ 2056478 (-)
G14219 NA other downstream 130167 1994210 ~ 1994898 (-)
G14104 NA other downstream 357607 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 1727932 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1867548 238241 ~ 249437 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2264747 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 2348717 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 2441515 4725927 ~ 4728210 (-)
G15736 NA other upstream 2673334 4800901 ~ 4801395 (-)

Expression


Co-expression Network