LOC122322940 (LOC107742941,LOC107564271,LOC107557161,LOC107748627,LOC107557163,LOC107748628,LOC107702193,LOC107557162)


Basic Information

Item Value
gene id LOC122322940
gene name LOC107742941,LOC107564271,LOC107557161,LOC107748627,LOC107557163,LOC107748628,LOC107702193,LOC107557162
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5406338 ~ 5409528 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216550.1
ATGGCAAACAGGAATGTGTCACTGCAGCTACTGCTGCTCATTCTATATGGTGTCTTTATGCCAGCTTCATCACAAGTCTGCAGCCTGCTTGGTCAGCCTGCCTTCCCTTCACTTTCTGCAGAAAGAGACATCAACATTGGGGCAATTTTCTCAATTCACAGAAATGCTCtactaaaaatacacagttatACTTCCAAACCAGATCCAACAACATGTGCCAGCTTAAACTTGCGTGAGTTTAAATTTGCTCAGACACTGATTTTTGCCATTGAGGAgattaataataacacacaaTTGTTGCCTGGTATTTCATTGGGCTATAAGATATATGATTCATGTCGCTCCTTCACTCAAACAATACTCTCAGGCATGGCTTTGATGAACGGTTATGAAGACAATTTAAGTGATACATCTTGTTCTAGACCACCAGCTGTGCATGCCATTGTTGGAGATTCAGCATCCTCATCCACCATTGGCTTGGCTTCTGTAGTTGGTCCATTCAGCATACCTGTTATCAGTCATTTTGCCACATGTGCATGTCTGAGTGACAGGAAAAGATATCCATCTTTCTTCAGAACAATTCCCAGTGACTATTACCAAAGTAGAGCTCTGGCTCAGCTTGTCAAGCACTTTGGCTGGACCTGGGTTGGGACGGTCAGGAGTCGCAATGACTATGGTAATAATGGAATTGCAGCATTTGAGGAAGCTGCAACAGAAGAAGGCATCTGTATTGAATATGCAGAGGCCATATTAAATAATGATCCACAAGAACAGTTTCTGAAGACACTGGAGGTGATCAAAAAGGGCACTGCCAGGGTTGTGCTAGCTTTTATTGCATTAGGAGATTTTCTCCCCCTCCTAAAAGTAATTTTGCAACACAACATCACAGGGATACAGTGGGTTGGCAGTGAATCCTGGATCACTTCTCGAACTCTTGCAGAAACGAAGGAATATAGTTTTCTTTCTGGAGCTGTGGGTTTTGCTATAGCAAATGCCAAAATTACGGGCCTGCGAGAGTTCCTATTGAATGTGCACCCTGATCAAGAACcaaaaaatgaacttttaaaagaattttgGGAAATAGGTTTTCATTGCTCATTTAGGAGCACTGGCAGTGGTGGCTGTACTGGTTCAGAGAAACTGGCAGAGCTGCAGAATGAATACACTGATGTATCAGAGCTACGAAttgtaaataaagtgtataCTGCAGCGTATGCTGTTGCATATACActacataatgtttttaaagacttCAGATCTTCTACCAACAGAAGCAAAATCGGATGGCCTATACCACAAATGGTATTGAAGTATATGAAGGATGTGAGATTCACTGTTAAAACCGGTGAAGAAATCTTTTTTGATTCAAGTGGTGATCCAGTAGCACGATATGACCTTGTTAACTGGCAGCTTGCTAAAGATGGAAGCCTGCAGTTTGAGCAAGTGGGCTTTTATGACAGCTCACTACCTTCAGGACGTCTTCAGGTCAGTCAGGAACACATACTGTGGGCAAAGAAAAGTGGACAGTTGCCTGTGTCCGTGTGCAGTGAGAGCTGCCCCCCCGGCACTAGAAAGGCTGTGCAAAAAGGTCGACCTGTCTGCTGTTATGACTGTATTCCATgtgcagaaggagaaatcagtaaTGAGACAGATTCAAGTGACTGCTTTCCATGTGATTTGGAGTACTGGTCAAATGAAAGCAAAGACAGATGTGTATTAAAAGTGGTTGAATTCCTGTCCTATACAGAAATCATGGGGatgattttttgtattttatcctTCATTGGGGTGTTATTAACAGCAAtggtatattttctgttttatcttCATAAAGAAACATCCATTGTAAGAGCAAACAACTCAGAGCTGAGCTTCCTGCTGCTCTTCTCActgtctctgtgttttctctgttctcttacTTTCATTGGTCGACCCACTGAGTGGTCCTGTATGTTGCGTCACACAACGTTTGGAATCACTTTTGTTCTCTGTGTCTCCTGTGTTCTCGGGAAAACAATAGTAGTTTTAATGGCCTTCAAGGCTACACTTCCAGGAAGTAAtgtcatgaaatggtttgggcCTCCTCAACAAAGACTCAGTGTCATTTCCTTAACGTTAATACAGGTGATTATATGTGTGCTTTGGTTAACAATATCACCACCTTTTCCATATATGAATTTGAACTATTATAGAGAAAAGATCATCCTAGAATGTAACTTAGGTTCAGCTCTTGGTTTCTGGGCTGTTCTAGGTTATACTGGCTTGTTATCAatcatgtgttttgttttagcttttcTTGCTCGGAAACTCCCTGATAATTTTAATGAGGCCAAGTTCATCACATTCAGTATGCTCATATTCTGTGCCGTATGGCTTACATTTATCCCGGCTTATGTCAGCTCTCCTGGAAAATTTACTGTAGCTGtgcaaatatttgcaatattagCATCAAGTTTTGGTTTactattttgcatatttgctccaaaatgttacataattttgctaaaaccagaaaaaaacacaaagaaacagatGATGAGGAAATAG

Function

NR:

description
PREDICTED: extracellular calcium-sensing receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216550.1 True 2547 mRNA 0.41 6 5406338 5409528

Neighbor

gene id symbol gene type direction distance location
LOC122322926 LOC107742941,LOC107564271,LOC107557161,LOC107702193,LOC107742944,LOC107564269,LOC107557163,LOC107748628 coding upstream 16986 5385095 ~ 5389352 (+)
LOC122322947 LOC107564267,LOC107702191 coding upstream 24374 5370085 ~ 5381964 (+)
LOC122322946 olfcg5,LOC107564274,LOC107702188,LOC107728083,LOC107680406,LOC107719307,LOC107569497,LOC107739792 coding upstream 55841 5347164 ~ 5350497 (+)
LOC122322945 LOC107674897 coding upstream 73483 5331203 ~ 5332855 (+)
LOC122363106 olfcg4,LOC107751720,LOC107663261,LOC107572100,LOC107662185,LOC107728083,LOC107680406,LOC107564274,LOC107702188 coding upstream 88153 5314922 ~ 5318185 (+)
LOC122323013 olfch1,LOC107564265,LOC107702187,LOC107728082 coding downstream 3035 5412563 ~ 5415878 (+)
LOC122323107 olfcj1,LOC107742780,LOC107564264 coding downstream 8956 5418484 ~ 5421716 (+)
LOC122363149 LOC107564267,LOC107702191,LOC107742931,LOC793043 coding downstream 16138 5425666 ~ 5428964 (+)
LOC122363154 olfcd2,LOC107751723,LOC107572101,LOC107557163,LOC107702193,LOC107748628,LOC107742944,LOC107557161,LOC107564269 coding downstream 25346 5434874 ~ 5438100 (+)
LOC122363145 LOC107702194,LOC107564272,LOC107742940,LOC107748628,LOC107557162,LOC107557161,LOC107702193,LOC107748627,LOC107742944,LOC107671077 coding downstream 40845 5450373 ~ 5453739 (+)
G124595 NA non-coding upstream 51358 5354713 ~ 5354980 (+)
G124544 NA non-coding upstream 222801 5011405 ~ 5183537 (+)
G124547 NA non-coding upstream 348500 5056750 ~ 5057838 (+)
G124533 NA non-coding upstream 498169 4903768 ~ 4908169 (+)
G124506 NA non-coding upstream 649719 4756230 ~ 4756619 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding downstream 250378 5659906 ~ 5660233 (+)
G124672 NA non-coding downstream 611713 6021241 ~ 6021636 (+)
G124673 NA non-coding downstream 614131 6023659 ~ 6023991 (+)
G124703 NA non-coding downstream 817953 6227481 ~ 6230584 (+)
LOC122362614 NA non-coding downstream 880994 6290522 ~ 6290901 (+)
G124598 NA other upstream 11026 5394895 ~ 5395312 (+)
G124580 NA other upstream 176392 5228563 ~ 5229946 (+)
G124577 NA other upstream 180281 5225808 ~ 5226057 (+)
G124553 NA other upstream 265667 5139490 ~ 5140671 (+)
G124548 NA other upstream 295705 5071645 ~ 5110633 (+)
LOC122363125 LOC107702192,LOC107742943,LOC107564270,LOC107557162,LOC107702193,LOC107742944,LOC107748627,LOC107671076,LOC107748628,LOC107564269,LOC107702194,LOC107671077,LOC107557163 other downstream 82709 5492237 ~ 5495793 (+)
LOC122323196 v2ra17,v2ra16,LOC107695207,LOC107568277,LOC107716837,LOC107695208,LOC107568268,LOC107568349 other downstream 209942 5619470 ~ 5624977 (+)
G124612 v2ra17,LOC107568349,LOC107568268,LOC107703349,LOC107695207,LOC107722082,LOC105904790,LOC107695201 other downstream 213925 5623453 ~ 5629653 (+)
G124661 NA other downstream 566682 5976210 ~ 5979282 (+)
LOC122362599 LOC107557170,LOC107748085,LOC107741383,LOC107569151,LOC107741381,LOC107697634,LOC107697635,LOC107568278,LOC107712093,LOC107671063,LOC107569152 other downstream 611021 6020549 ~ 6029121 (+)

Expression


Co-expression Network