LOC122323202 (nnt2,LOC108412674)


Basic Information

Item Value
gene id LOC122323202
gene name nnt2,LOC108412674
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16536459 ~ 16550717 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216893.1
TTGTGGTCCGAGAGCAGCAGGTGTCTTCGGCCGGCCGCTCTTCTGCTGGAACATGTGTGTCTGCGTCTGACGgcgagggtgtgtgtgtgtgtgtgtgagactgtgtttTGTTCCTCAGACGTCTGATTCATGGCGTGTCTGCTGCGCTGCGTGACATGCTGCTCTCTTCAGCGGCCGGGGAGAAGACTCTTCCAGACCTTCCCCGTTCTGTTCGATCAGCAGGCTCATAAAGgtgtgaGATATAAAGATGTGCTGGTGGGCGTTCCTAAGGAGATCTATCAGAACGAGCGGCGGGTGGCCGTGTCGCCCGCGGGCGTGGAGATGCTGGTCAAGCAGGGCTTCAGGGTGCAGGTGGAGTCCGGCGCCGGACGCGAGGCCAAGTTCTCTGATGATCAGTACCGAGCCGCCGGAGCCCAGATCACCGACACCAAGGGAGCCTTTGGATCAGATCTGGTCCTGAAGGTCCGAGGGCCGGTGTTGAACGAGGGTCTGAGGATACACGAGGCTGACCTCCTGAAGCCCGGATCCACGCTGGTCAGCTTCATCTACCCGGCGCAGAACCCCGAGCTGATGGACAGACTGAGCAGACAGCAGTGTACGGTGCTGGCCATGGACCAGGTGCCCCGGGTCACCATCGCACAGGGATACGACGCCCTCAGCTCCATGGCCAACATCGCAGGGTATAAGGCAGTGGTTCTTGCAGCTAATCACTTCGGGAGGTTCTTCACGGGACAGATCACCGCGGCAGGAAAAGTTCCTCCGGCGAAGgtgctgGTTATTGGTGGTGGTGTGGCGGGTCTGGCTGCGGCTGGAGCGGCTAAATCAATGGGTGCCATCGTCAGAGGATTCGAcaccagACCGGCGGCGCTGGAGCAGTTCAAGTCGTTCGGAGCTGAGCCGCTGGAGATAAACATCGCTGAGTCGGGTGAAGGAGTCGGAGGATACGCTAAAGAGATGTCTAAAGAGTTCCTGGAGGCCGAGATGAGTCTGTTCTCCAAACAGTGCAAGGACGTGGACATCGTCATCAGCACGGCTCTGATTCCTGggaaGCGTGCTCCGCTGCTGATCAAGCGTGAGATGGTGGAGAGTATGCGGGACGGCTCTGTGGTGGTGGACCTGGCGGCGGAGGCGGGAGGGAACATCGAGACCACCAGACCCGGAGAAGTGTACGTCCATCAGGGCGTGACACACATCGGCTTCACGGATCTGCCCAGCCGTATGCCCACCCAGGCCAGCTCGCTCTACTCCAACAACATCCTCAAGCTGCTGAAGGCCATCAGCCCCGACAAAGAGTTCTTCCACTTCCAGCCCTGCGACGACTTCGACTACGGGACGCTGGATCACGTGATCCGAGGGACGATGGTGATGAAGGAAGGTAAGAATATTTTCCCCGCGCCGCTGCCGAAAACCACTCCGCCGCCGGCTCCCGCTAAACACAAGACCGTCGCTGAGCTGGAGGCTGAGAAACAGGCCGAAATCTCTCCTTTCAGACGCACCATGACATCAGCGGGAGTCTACACCGCAGGTCTCTCGACCGTGCTGGGTTTGGGTATCGCCTCTCCTAACGCTGCCTTCACTCAGATGGTGACGACCTTTGGCCTCGCAGGAATTGTGGGATATCACACGGTGTGGGGCGTGACCCCGGCGCTGCACTCGCCGCTGATGTCAGTGACCAACGCCATCTCAGgtctGACGGCGGTGGGGGGGCTGGTGCTGATGGGTGGAGGTCTCACACCTTCATCTGTCCCTGAATCTCTGGCGCTGCTCGCTGCGTTTGTGTCCTCCATCAACATCGCAGGTGGGTTTCTGATCACGCAGAGGATGCTGGACATGTTTAAGAGGCCCACAGATCCTCCGGAGCACAACTATCTCTACTCTCTGCCCGGCCTGGCGTTTGTGGGCGGATACGGGGCGTCTGTGGCCGGAGGATACAGCAtcgagcagatgatGTACCTGGGCTCCGGTGTGTGTTGTGTGGGGGCTCTGGCCGGTCTCTCCGCTCAAGGCACCAGTCGTCTGGGGAATGCTCTGGGGATGATCGGGGTGGCTGGAGGAATCGCTGCTACTCTGGGCGCTCTGAAGCCCTCTCCTGAGCTCCTGTCACAGATGTCTCTGGCCATGGCCACCGGAGGAACTCTGGGTCTGACCATCGCCAAGCGCATCGAGATCTCGGACCTGCCTCAGCTGGTGGCTGCGTTCCACAGTCTGGTGGGTCTGGCTGCGGTTCTGACCTGCGTCGCCGAGTTCATGATCGAGCAGCCGCACCTGGACACTCACCCGGCCGCCGGCGTGCTGAAGATCGTGGCCTATCTGGGCACCTACATCGGAGGAGTGACCTTCAGCGGCTCTCTGGTCGCCTACGGAAAGTTACAAGgtttaTTGGACTCGGCTCCTCTGCTGCTGCCAGGTCGTCACATGTTAAACGCGGGTCTGATGGCAGCGTCGGTGCTCGGGATGGTGCCCTTTATGATGAGTGACAGCTTTAACACAGGCATGGGCTGCTTGCTAGGCGTCTCCGGCCTCTCCACCGTCATGggtgTGACGCTCACCGCCGCCATCGGAGGAGCTGATATGCCGGTGGTGATCACGGTGTTGAACAGTTACTCCGGATGGGCGCTGTGTGCCGAGGGATTCCTGCTGGACAATAACCTGATGACCATCGTGGGCGCTCTGATCGGCTCGTCCGGTGCCATCCTGTCCTACATCATGTGTGTGGCCATGAACCGCTCGCTGCCCAACGTCATCCTGGGAGGATACGGAACCTCGTCCACCGCCGGCGGGAAGCCCATGGAGATCACCGGCACACACACCGAGGTCAACGTGGAGCAGTCCATCGAGATGATCAGAGAGGCCAACAGCATCATCATAACACctgGCTGGGGTCTGTGTGCGGCCAAGGCTCAGTATCCCATCGCTGACATGGTGAAGATGTTGAGAGAACAGGGCAAGACTGTGAGGTTCGGGATTCACCCGGTGGCGGGCCGCATGCCCGGTCAGCTCAACGTTCTTCTGGCCGAGGCCGGCGTCCCGTACGACGTGGTTCTGGAGATGGACGAGATCAACGAAGACTTCCCAGAGACCGACCTGGCGCTCGTGATCGGAGCCAACGACACGGTCAACTCGGCCGCTCAGGAGGACCCCAACTCCATCATCGCCGGGATGCCCGTGCTGGAGGTCTGGAAGTCCAAACAGgtgatCGTGATGAAGCGTACTCTGGGTGTGGGATACGCGGCGGTGGACAATCCCATCTTCTATAAGCCCAACACGGCCATGCTGCTGGGAGACGCCAAGAAGACCTGCGACAGCTTACAGGCCAAGATCAGAGAGGCCTATTATTAACACACAGCTTTATTACACACTGAAGTGCCTTAAAAACAAGATGCCAATCAGTGAATGCATGCGGCTTTTCACTTGTAAATAAAAGTATCTCACTGAGA

Function

symbol description
nnt2 Predicted to enable NAD binding activity; NAD(P)+ transhydrogenase activity; and NADP binding activity. Predicted to be involved in NADPH regeneration. Predicted to act upstream of or within proton transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in familial glucocorticoid deficiency. Orthologous to human NNT (nicotinamide nucleotide transhydrogenase).

NR:

description
NAD(P) transhydrogenase, mitochondrial-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008750 NAD(P)+ transhydrogenase (AB-specific) activity molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K00323 NNT; H+-translocating NAD(P) transhydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216893.1 True 3437 mRNA 0.59 20 16536459 16550717

Neighbor

gene id symbol gene type direction distance location
slc30a4 slc30a4 coding upstream 13776 16514170 ~ 16522683 (+)
mibp2 mibp2,LOC107713061,LOC107690135,LOC107710817,LOC107663471,LOC107595359,LOC107595360,LOC107097782,LOC107381735 coding upstream 31994 16501934 ~ 16504465 (+)
usp8 usp8,LOC107595392,LOC107715249,LOC107665382 coding upstream 84341 16442480 ~ 16452118 (+)
slc27a2a NA coding upstream 110285 16420194 ~ 16426174 (+)
zgc:158482 LOC107727401,LOC107703947,LOC107569985 coding upstream 117440 16411365 ~ 16419019 (+)
secisbp2l secisbp2l,LOC107573840,LOC107740797,LOC107713195,LOC106587693,LOC107698883 coding downstream 41872 16592589 ~ 16610126 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding downstream 67453 16618170 ~ 16678066 (+)
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding downstream 154864 16705581 ~ 16718158 (+)
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding downstream 229965 16780682 ~ 16789673 (+)
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding downstream 268570 16819287 ~ 16829354 (+)
G126779 NA non-coding upstream 11352 16509623 ~ 16525107 (+)
G126723 NA non-coding upstream 41825 16453997 ~ 16494634 (+)
G126726 NA non-coding upstream 42906 16491533 ~ 16493553 (+)
G126755 NA non-coding upstream 72947 16462792 ~ 16463512 (+)
G126743 gatm,LOC107726335,LOC107665388 non-coding upstream 129835 16405455 ~ 16406624 (+)
G126766 fgf7,LOC107663468,LOC107663467,LOC107739939,LOC107574045,LOC107595354 non-coding downstream 2858 16553575 ~ 16559719 (+)
G126771 NA non-coding downstream 6002 16556719 ~ 16573530 (+)
G126786 NA non-coding downstream 60464 16611181 ~ 16611475 (+)
G126792 NA non-coding downstream 121819 16672536 ~ 16673306 (+)
G126813 slc24a5 non-coding downstream 168779 16719496 ~ 16720130 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 265192 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 480832 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 582806 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1488566 15035383 ~ 15047893 (+)
LOC122322993 LOC107709552 other upstream 1626302 14906616 ~ 14910157 (+)
G126820 NA other downstream 202992 16753709 ~ 16818399 (+)
G126884 ctxn2 other downstream 523477 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 579205 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 753052 17303769 ~ 17309158 (+)
G127098 NA other downstream 859968 17410685 ~ 17411593 (+)

Expression


Co-expression Network