st8sia2 (st8sia2,LOC107693033,LOC107715201,LOC107690408,LOC107549020)


Basic Information

Item Value
gene id st8sia2
gene name st8sia2,LOC107693033,LOC107715201,LOC107690408,LOC107549020
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 2389088 ~ 2400009 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263975.1
AGGACAAGGATCCGGATTAGAATTTAGAAAAGAACCATTAgctcaatataaaaacaatagaagtcaACGGAAAGTCCTGAACGTAGAGAATCAAACGTCTGTGTCTTCGTCAAATAGAAACAAAGAGAGCAAGACGGAGAGGGGGAATCGTATTTCATATTCAATTTTAAACCCGCGCCTCCCAATGCCAATTACGTGGCTTAACTCAATGCATAACATCCATATGTGAGTTTATGCACCTTGCAGGCAAAGTTTCAAGGGAACTGCCTCCCACCAGATCTCCGAGGAGTAGAAGAGAAGAAAGGACGTTCACGTTTGCCTCCTCTCCACACTACTTTAGTGAAGGTGGAAGAAGCCGATGGACGCGATGTTTGATGCAGACAACTGTTCGCTAACCTGCACGGCCGGTTAGAATGGTGCGGCTTTGTCGAGGAGACGGAGGAACGTTACATGTGTTGCCCTGCGTAAGGAAGCGGTGTGAAAGAAGAACGGATCTCTATTGCGCTTCTAGTTAAACGCATCTGGAGAATCGCACACATCGGTCAAGTCATGTCTTTTGAATTCCGAATACTGATGTTCGGAATCGGGACAGCCCTGGTTATATTTGTGATCATAGCTGATATATCGGAAGTGGAGGAAGAAATCGCGAACATTGAGGATTCACAGAAATTTCACTTAAAAAGCTTTGTCCTTCAGTCCAACAGAAATTCAGTCTTGAATGCTGCTCCTACTTCACTAGTCACCTATAGAAAGAGCAAAGTCTCCTCTTCTCCAGTTCCACTGCCAGGCATAAAGAGCAAAACCAGCAATTCATCCTCACCAGAATGGACTTTCAACAGAACCTTGTCTAACCTCATCAGgaaaaacattttgagGTTCCTGGATGCTGAGAGGGACATCTCAATCCTTAAGAGCACCTTTAAACCCGGGGATgtcattcattatatatttgaCCGCCAGAGCACCACAAACATCTCCGAGAACCTGTACCACCTTTTGCCGACGGTGTCTCCCATGAAGAACCAGCATTACAAACAATGTGCCATCGTAGGGAACTCTGGGATACTACTGAATAGCAGCTGCGGCAGAGAGATTGATTCACACGACTTTGTCATCCGGTGTAACCTGGCTCCAGTAGAGGAGTACGCGACTGATGTGGGCCTGCGCACCAGTCTGGTGACCATGAACCCTTCTGTGGTGCAGCGTGCTTTTCAGGACCTGCACAGCGACGAGTGGGTACAGCGCTTCGTCCACAGGCTGCAGAGTCTCAGCGGGAGCGTGCTGTGGATCCCTGCCTTCATGGCTAAAGGAGGAGAGGAGCGAGTGGAGTGGGCGATCCGCCTAATTCTTCTGCACACCGTGAACGTCCGTACCGCCTTCCCCTCCCTGCGTCTGCTCCATGCTGTCAGAGGATACTGGTTGACCAATCACGTCCAGATTAAAAGACCCACCACCGGGCTCCTGATGTACACCATGGCCACCCGCTTTTGCGATGAGATCCACTTGTACGGCTTCTGGCCTTTCGCCCACGATCCAGATGGCAAACCGGTCAAGTACCACTACTACGACACGCTAACTTACCACTACACATCCAGTGCCAGTCCACACACGATGCCTTTGGAATTCCGAACTTTAAGTGCTCTTCACAGACAGGGGGCGCTGCGGCTGCACACCGGACCGTGTAAACTTCCAACATGAGCGCTCGCCGCCTCGTTCCGAACGGTTTCGTACACTGGACCTTAGAGGTGCTGTGGAAAATACAGATTACCTGAATGCTTCGGGTAAATCTCTGACCAAATGTgagaatgcaatattttttttggttcctTTTAAAGTGTTCAACCTTGAAAAGgttttaaatctgtaattaaGGCTATTTTATAAAAAGCCCCTTGCCGTTGGTTTATTTCTACTTATCTCGCGTTTCATTAAGTGTCTTATTTGTTCAGATTTTCTGCCATATTTGGCCACTAGGTGGGAGCATATGTTCTTTCTGTCTTTAGTCTTAGCTGTTCGGcacaattgtttaaaaaaaggtacttaagaatgtcatttatttgttgcCTTTACGGTCTAAGTGTCTGTTGAGCCCACAGACAGAACGACTGAATGTAAGACTCTCGTcggtttttacatttaacatcgAGCAATTTAGACTTAGGACGAACGTTTTCACTGGTTTGAAGGGGGTTTTCCACTACGTTGCTTACGTACGTTCTTCTAGAAGATATTTTGGACAATTTAGTGCCTCAAGTTAGAGATGACGCTATGCTGCGTCGCGTGAGACTCGATAAAGTTGCCTTAGAAAGACTTAGTGAAGTAGTATTGTGATTGTTAGCAGGCGgtgacatttttgcattgatGTGCGCTAGTACTTGCGGAACATGTGAACTGCAGGCGTGTAGTTGAACGTGTTTGCACAGCGAGGCAGCTATCGGAGCGAGTGCAGCCCCACGCTGAGATACTGTAGCCAAAATCCAGAACACACCCAGCTGTTCACACACTCTTGTGTACTCAAGGATGGTCGAGCGTGAAGGGACATTCGGTGTGTACACTTTGGAATTTGTTAAAGCCACATAGCAGCGGCGTTTCTGTATCTAAGGGTTTTTTGGGGGTCGGGGTTGGATTTCTTTTTGTATGTGACGCATATTACATGTTTAAGTGAATGTATTTGTGATAACTTATAAGTAAAAACATACTGCtgta

Function

symbol description
st8sia2 Enables sialyltransferase activity. Predicted to be involved in N-glycan processing; oligosaccharide metabolic process; and protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including nervous system; neural keel; neural tube; pleuroperitoneal region; and unfertilized egg. Orthologous to human ST8SIA2 (ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2).

NR:

description
alpha 2,8-polysialyltransferase IIa

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0030173 integral component of Golgi membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG:

id description
K06612 SIAT8B; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8B)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263975.1 True 2706 mRNA 0.46 6 2389088 2400009

Neighbor

gene id symbol gene type direction distance location
zgc:162879 zgc:162879,LOC107556259,LOC107691119,LOC107715222,LOC107690369 coding upstream 221797 2159316 ~ 2167291 (+)
sema4ba sema4ba,LOC107714785,LOC107556264,LOC107691120,LOC107715225,LOC107551463,LOC107690368 coding upstream 233585 2095553 ~ 2155503 (+)
idh2 idh2,LOC107714782,LOC107691122,LOC107715227,LOC106514339 coding upstream 355018 2022670 ~ 2034070 (+)
ankrd34c ankrd34c,LOC107715204,LOC107691151,LOC107551450,LOC107690404,LOC107556256,LOC107714779 coding upstream 369031 2015072 ~ 2020057 (+)
LOC122323046 frmd5,LOC107562133,LOC570903,LOC108435336,LOC107556247 coding upstream 481505 1816402 ~ 1907583 (+)
nr2f2 nr2f2,LOC107549018,LOC107690378,LOC107601645,LOC107715214 coding downstream 446034 2846043 ~ 2853173 (+)
hsf4 hsf4,LOC107596914,LOC107715602,LOC107660759,LOC107690412,LOC107583721 coding downstream 972077 3372086 ~ 3380670 (+)
nudt21 nudt21,LOC107660760,LOC107690386,LOC107721012 coding downstream 981013 3381022 ~ 3383654 (+)
LOC122362457 NA coding downstream 983787 3383796 ~ 3386206 (+)
LOC122362595 NA coding downstream 989919 3389928 ~ 3391792 (+)
LOC122323220 NA non-coding upstream 57515 2322589 ~ 2331573 (+)
LOC122323174 NA non-coding upstream 327863 2054520 ~ 2061225 (+)
G123643 NA non-coding upstream 468197 1919837 ~ 1920891 (+)
G123642 NA non-coding upstream 470622 1859008 ~ 1918466 (+)
G123622 NA non-coding upstream 629219 1758245 ~ 1759869 (+)
LOC122322992 NA non-coding downstream 40028 2440037 ~ 2512970 (+)
G123868 rgma,LOC107690376,LOC107715612,LOC107715216,LOC107693037 non-coding downstream 45592 2445601 ~ 2449435 (+)
LOC122323097 NA non-coding downstream 195478 2595487 ~ 2598265 (+)
LOC122362676 NA non-coding downstream 209288 2609297 ~ 2645661 (+)
G123935 NA non-coding downstream 438065 2838074 ~ 2838945 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other upstream 69948 2301758 ~ 2319140 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 148828 2207199 ~ 2240260 (+)
G123664 NA other upstream 386798 2001786 ~ 2002290 (+)
G123568 NA other upstream 817157 1565426 ~ 1571931 (+)
tmem123 NA other upstream 1334353 1045194 ~ 1054735 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other downstream 10724 2410733 ~ 2461790 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other downstream 1111948 3511957 ~ 3554690 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other downstream 1319879 3719888 ~ 3743756 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other downstream 2359619 4759628 ~ 4795836 (+)
G124548 NA other downstream 2671636 5071645 ~ 5110633 (+)

Expression


Co-expression Network