paqr5a (paqr5a,LOC107686313,LOC107596958,LOC107738698)


Basic Information

Item Value
gene id paqr5a
gene name paqr5a,LOC107686313,LOC107596958,LOC107738698
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 4287447 ~ 4291461 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264128.1
AACGACAACAACAGATACATTTGCAAAACTAGACCACTTCTTTGACGGGCGTCGCGTTGCGCCTGTAGTGGGATAATTCAGCTTCTTGGATACGGAGCGTTCATGAGAGTATACTAGCCAATCACAGAAGCCCGGGGACCTACAGCTGACAACGAAAACAAAGAAAGGCATGTTTTTCCTCTCACTCTCTACTCGTTGTCGGGAGGGAAAAAATCAGACATTCACTGTATGTTGTTTATTCAGTTCGCACACACTCGAAACGTCGAAATACATCTGAAGGGAGGGGTTTTATAGAAAGATCCTGAGTTGGTGACTGGACTGTGAGATATCATACAGTACAGAAGAACGCTAAACAGAAGAAGTCCAAAACAATCACAGGGAATCAAGAAAATCTGTAGAAGGCTAATGGTCTCTCCACCTTGTGATTGCTGGACCCCTCTCTACTATGCTCAATCTCATCAAGCTACCTCAAGTGTTCACCATCAACCAAGTTCCAAaaGTCTTCCACGAGGATGGCATCATTTCAGGGTACCGCCACCCATGCAGCTCTGCCAAAGACTGTGTGCTTAGTCTTTTCCAGCTAACAAATGAAACCCTCAATATTTGGACTCATTTCCTGCCTTCGTGgTTTTTCTTATGGAAACTGACAGTAGTACTAGTGCAAGATGACTGGCAGGATCCTTTCAACTGGCCCTTGCTGATGTTCCTTTTGTCGTGCTGTGTGTACCCACTCGCTTCCAGCTGTGCTCATACCTTCAGTACCATGTCAGAGAGGGCCAGGCACATCTGCTTCTTCTTTGATTATGGAGCTCTCAGCTTCTACAGTCTTGGTTCTGCCATCATCTACTCTTCTTACTCATTTCCAGACAAATGGGTTAATAGCACATTTCACAAATACTATGTTCCTATAGCTGTTGTCAATTCTGTTATCTCCACTGCACTGGCATGCTACTCAAGACTTGGTTTGCCATTTTTTCAGTATAATTACCACAGCATTAAAAGTTGTTCTGGAAAATTAGATCAGAAACTGAGTAAATGTCTACGGATAATCGCCTTCGTCTATCCATATGTTTTTGACAACATCCCTCTCTTTTATAGAATCTGTGTGTGCACTGGTGAGGGTTGCACTGTTAATGAAGCCAATGCTGTTCACTATCAGCACACGTCACTGGCTGTTCTCACTGGCTTTCTTTTTGCCACACACCTGCCTGAACGCTTGGCTCCTGGCAGTTTTGACTACATAGGTCACAGTCATCAGCTCTTCCACGTGTTTGCTATTATTGGCACGTATTTCCAGATGACTGCCATTGAACTTGACATGGCTGCACGAAAGCAGTGGCTTCATGCTCATTTGCCACCAGTCACGCTTTCAGACACCGTGGGAGCTGTGTTATTTAGTGTGTTCAGCAGCCTTTGTATAGTATATGCCTTCAGTCTGGCACTTTTCTCCACTAGAGGTGTAAAggacaaattaatttgaattgtgACATTTGATGAGGTTACTTAGGGCAGCTAAGTTAGTTTCCCTTAAAACTaagtatattgtgtgtatatatgtgttaaaTGGCAGCAATTTCATGAAGATTTTATGTAAATTGGAAAAGTATAAGACTGTATAATTTATGATTGTTTTGTATTGATTCATGTTTTTGTACTGAGTGTCATTTTTCTCTACTTCTAATCACATGCTTGacattttcacaatttaaaagcacatttccaCGTTTTTGAAGCACATGAATCAAACTATATTATCATTGTTTTTACAAGTGCCTTTTTATAATCAGTCTTTTTGAAAACTGTTAAGTGTATAATCGTGGTGTttcttatgaaaaaaaaatcttgttaatatgtaacattttgttatttttacttaataaaactaTG
>XM_043264129.1
AACGACAACAACAGATACATTTGCAAAACTAGACCACTTCTTTGACGGGCGTCGCGTTGCGCCTGTAGTGGGATAATTCAGCTTCTTGGATACGGAGCGTTCATGAGAGTATACTAGCCAATCACAGAAGCCCGGGGACCTACAGCTGACAACGAAAACAAAGAAAGGCATGTTTTTCCTCTCACTCTCTACTCGTTGTCGGGAGGGAAAAAATCAGACATTCACTGTATGTTGTTTATTCAGTTCGCACACACTCGAAACGTCGAAATACATCTGAAGCTTTATGTTCAAGATTcatgaatataaaacacaatattgaACTCCCATATGTGCACTTAGGGAGGGGTTTTATAGAAAGATCCTGAGTTGGTGACTGGACTGTGAGATATCATACAGTACAGAAGAACGCTAAACAGAAGAAGTCCAAAACAATCACAGGGAATCAAGAAAATCTGTAGAAGGCTAATGGTCTCTCCACCTTGTGATTGCTGGACCCCTCTCTACTATGCTCAATCTCATCAAGCTACCTCAAGTGTTCACCATCAACCAAGTTCCAAaaGTCTTCCACGAGGATGGCATCATTTCAGGGTACCGCCACCCATGCAGCTCTGCCAAAGACTGTGTGCTTAGTCTTTTCCAGCTAACAAATGAAACCCTCAATATTTGGACTCATTTCCTGCCTTCGTGgTTTTTCTTATGGAAACTGACAGTAGTACTAGTGCAAGATGACTGGCAGGATCCTTTCAACTGGCCCTTGCTGATGTTCCTTTTGTCGTGCTGTGTGTACCCACTCGCTTCCAGCTGTGCTCATACCTTCAGTACCATGTCAGAGAGGGCCAGGCACATCTGCTTCTTCTTTGATTATGGAGCTCTCAGCTTCTACAGTCTTGGTTCTGCCATCATCTACTCTTCTTACTCATTTCCAGACAAATGGGTTAATAGCACATTTCACAAATACTATGTTCCTATAGCTGTTGTCAATTCTGTTATCTCCACTGCACTGGCATGCTACTCAAGACTTGGTTTGCCATTTTTTCAGTATAATTACCACAGCATTAAAAGTTGTTCTGGAAAATTAGATCAGAAACTGAGTAAATGTCTACGGATAATCGCCTTCGTCTATCCATATGTTTTTGACAACATCCCTCTCTTTTATAGAATCTGTGTGTGCACTGGTGAGGGTTGCACTGTTAATGAAGCCAATGCTGTTCACTATCAGCACACGTCACTGGCTGTTCTCACTGGCTTTCTTTTTGCCACACACCTGCCTGAACGCTTGGCTCCTGGCAGTTTTGACTACATAGGTCACAGTCATCAGCTCTTCCACGTGTTTGCTATTATTGGCACGTATTTCCAGATGACTGCCATTGAACTTGACATGGCTGCACGAAAGCAGTGGCTTCATGCTCATTTGCCACCAGTCACGCTTTCAGACACCGTGGGAGCTGTGTTATTTAGTGTGTTCAGCAGCCTTTGTATAGTATATGCCTTCAGTCTGGCACTTTTCTCCACTAGAGGTGTAAAggacaaattaatttgaattgtgACATTTGATGAGGTTACTTAGGGCAGCTAAGTTAGTTTCCCTTAAAACTaagtatattgtgtgtatatatgtgttaaaTGGCAGCAATTTCATGAAGATTTTATGTAAATTGGAAAAGTATAAGACTGTATAATTTATGATTGTTTTGTATTGATTCATGTTTTTGTACTGAGTGTCATTTTTCTCTACTTCTAATCACATGCTTGacattttcacaatttaaaagcacatttccaCGTTTTTGAAGCACATGAATCAAACTATATTATCATTGTTTTTACAAGTGCCTTTTTATAATCAGTCTTTTTGAAAACTGTTAAGTGTATAATCGTGGTGTttcttatgaaaaaaaaatcttgttaatatgtaacattttgttatttttacttaataaaactaTG
>XM_043264130.1
acAACGACAACAACAGATACATTTGCAAAACTAGACCACTTCTTTGACGGGCGTCGCGTTGCGCCTGTAGTGGGATAATTCAGCTTCTTGGATACGGAGCGTTCATGAGAGTATACTAGCCAATCACAGAAGCCCGGGGACCTACAGCTGACAACGAAAACAAAGAAAGGCATGTTTTTCCTCTCACTCTCTACTCGTTGTCGGGAGGGAAAAAATCAGACATTCACTGTATGTTGTTTATTCAGTTCGCACACACTCGAAACGTCGAAATACATCTGAAGGGAGGGGTTTTATAGAAAGATCCTGAGTTGGTGACTGGACTGTGAGATATCATACAGTACAGAAGAACGCTAAACAGAAGAAGTCCAAAACAATCACAGGGAATCAAGAAAATCTGTAGAAGGCTAATGGTCTCTCCACCTTGTGATTGCTGGACCCCTCTCTACTATGCTCAATCTCATCAAGCTACCTCAAGTGTTCACCATCAACCAAGTTCCAAaaGTCTTCCACGAGGATGGCATCATTTCAGGGTACCGCCACCCATGCAGCTCTGCCAAAGACTGTGTGCTTAGTCTTTTCCAGCTAACAAATGAAACCCTCAATATTTGGACTCATTTCCTGCCTTCGTGgTTTTTCTTATGGAAACTGACAGTAGTACTAGTGCAAGATGACTGGCAGGATCCTTTCAACTGGCCCTTGCTGATGTTCCTTTTGTCGTGCTGTGTGTACCCACTCGCTTCCAGCTGTGCTCATACCTTCAGTACCATGTCAGAGAGGGCCAGGCACATCTGCTTCTTCTTTGATTATGGAGCTCTCAGCTTCTACAGTCTTGGTTCTGCCATCATCTACTCTTCTTACTCATTTCCAGACAAATGGGTTAATAGCACATTTCACAAATACTATGTTCCTATAGCTGTTGTCAATTCTGTTATCTCCACTGCACTGGCATGCTACTCAAGACTTGGTTTGCCATTTTTTCAGTATAATTACCACAGCATTAAAAGTTGTTCTGGAAAATTAGATCAGAAACTGAGTAAATGTCTACGGATAATCGCCTTCGTCTATCCATATGTTTTTGACAACATCCCTCTCTTTTATAGAATCTGTGTGTGCACTGGTGAGGGTTGCACTGTTAATGAAGCCAATGCTGTTCACTATCAGCACACGTCACTGGCTGTTCTCACTGGCTTTCTTTTTGCCACACACCTGCCTGAACGCTTGGCTCCTGGCAGTTTTGACTACATAGGTAGGTCACAGTCATCAGCTCTTCCACGTGTTTGCTATTATTGGCACGTATTTCCAGATGACTGCCATTGAACTTGACATGGCTGCACGAAAGCAGTGGCTTCATGCTCATTTGCCACCAGTCACGCTTTCAGACACCGTGGGAGCTGTGTTATTTAGTGTGTTCAGCAGCCTTTGTATAGTATATGCCTTCAGTCTGGCACTTTTCTCCACTA

Function

symbol description
paqr5a Predicted to enable signaling receptor activity. Predicted to act upstream of or within oogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in hindbrain; olfactory placode; ovarian follicle stage IV; and peripheral olfactory organ. Orthologous to human PAQR5 (progestin and adipoQ receptor family member 5).

NR:

description
PREDICTED: membrane progestin receptor gamma-A-like

GO:

id name namespace
GO:0048477 oogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005496 steroid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264128.1 False 1887 mRNA 0.40 9 4287449 4291461
XM_043264129.1 True 1947 mRNA 0.40 9 4287449 4291461
XM_043264130.1 False 1460 mRNA 0.45 9 4287447 4291028

Neighbor

gene id symbol gene type direction distance location
LOC122363152 fam180b,LOC107596959,LOC107738700,LOC107708214 coding upstream 5510 4280090 ~ 4281937 (+)
ighmbp2 ighmbp2,LOC107738695,LOC107596955,LOC107708224,LOC107583861,LOC107672301 coding upstream 23736 4257020 ~ 4263711 (+)
dennd11 LOC107738692,LOC107708228,LOC107686315,LOC107672298,LOC107583753 coding upstream 34155 4246548 ~ 4253292 (+)
bcl2l13 bcl2l13,LOC107738690,LOC107708230,LOC107686320,LOC107672257,LOC107583859 coding upstream 50235 4224780 ~ 4237212 (+)
wnt2 wnt2,LOC107708232,LOC107738769,LOC107660945,LOC107596948,LOC106561551 coding upstream 64327 4215421 ~ 4223120 (+)
kif23 kif23,LOC107708211,LOC107672274,LOC107686310 coding downstream 776 4292237 ~ 4301878 (+)
aagab aagab,LOC107596965,LOC107686304,LOC107738712,LOC107718310,LOC107672261,LOC107583761 coding downstream 293728 4585189 ~ 4588702 (+)
snapc5 snapc5,LOC107672220,LOC107596973,LOC107686356,LOC107583772 coding downstream 431578 4723039 ~ 4725612 (+)
lctlb lctlb,lctl,LOC107596968,LOC107686298,LOC107738718 coding downstream 434989 4726450 ~ 4735467 (+)
rpl4 rpl4,LOC107686296,LOC107596972,LOC107718306,LOC107583768,LOC107672218 coding downstream 448682 4740143 ~ 4743910 (+)
G124295 NA non-coding upstream 103796 4182733 ~ 4183651 (+)
G124294 cftr,LOC107583749,LOC107738689,LOC107596947,LOC107672176,LOC107708216 non-coding upstream 105056 4181385 ~ 4182391 (+)
G124293 cftr,LOC107596947,LOC107738689,LOC107708216,LOC107672176,LOC107583749 non-coding upstream 106158 4180426 ~ 4181289 (+)
G124292 NA non-coding upstream 108091 4179040 ~ 4179356 (+)
G124161 NA non-coding upstream 151847 4135383 ~ 4135600 (+)
G124427 NA non-coding downstream 170384 4461845 ~ 4462124 (+)
G124425 NA non-coding downstream 185086 4476547 ~ 4477879 (+)
LOC122323045 NA non-coding downstream 396573 4688034 ~ 4691944 (+)
G124497 NA non-coding downstream 453299 4744760 ~ 4745307 (+)
G124498 NA non-coding downstream 454142 4745603 ~ 4745835 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other upstream 543691 3719888 ~ 3743756 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other upstream 732757 3511957 ~ 3554690 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other upstream 1825657 2410733 ~ 2461790 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other upstream 1968307 2301758 ~ 2319140 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 2047187 2207199 ~ 2240260 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other downstream 468167 4759628 ~ 4795836 (+)
G124548 NA other downstream 780184 5071645 ~ 5110633 (+)
G124553 NA other downstream 848029 5139490 ~ 5140671 (+)
G124577 NA other downstream 934347 5225808 ~ 5226057 (+)
G124580 NA other downstream 937102 5228563 ~ 5229946 (+)

Expression


Co-expression Network