XLOC_006746 (plek2)


Basic Information

Item Value
gene id XLOC_006746
gene name plek2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 33123484 ~ 33134611 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012990
TTTAACATGGGCACTGAGTCAGAAAACAGCGGCATCCTTAAAGAGGGCTTTATGGTAAAAAGGGGTCACGTTGTTCAAAACTGGAAAGTTCGTTGGTTTGCACTTAAATCGGACAGACTCCTTTATTACAAATATGAGGGCGGCAAACGAGATTCTTGCCACCGAGGGACCATTTTATTGAGGAACTGCAAAATCACATGTCCTTACCTGGAGTACGAAAACAGACCGTTGGTGATAAAATTGGAGACCAACACATCAGAAGAGCACTTTCTGGAGGCTTGCATGAGGGAGGAACGTGATGAATGGGCTGCGGCGATTGATGCAGCAGTACAGAAACTCAGCTCAAGTGATGCACAGGTTCCTGCCCCATCTCAAATAAAAGCCTCCTCAACCCTTCAACTTCAGAATGTCAACCTCAGTCAGGTGGTGGACTCCATGTATGACGTTCACACTGGTATCCGGCACTGCAGTCACATCGAGCAGGGCAGCTCTTACAGCAACTGTTTCTCAGGTTCAGCAGTGGTGGATTGGCTTGTGTTTAATAAGCTGGCTCTGAGCCGTGTGGAGGCAGTAACGCTGGCCTCTGCTCTGCTGGATGAAGGCTCTCTGCGGCCCGTTGGGATCAGGAGTGCAGACGCTCTCCGTAACGCTGCTCTCGGAGAACAGTTCCTCGACGATTCCACTGCTCTCTACTCCTTTTCCCAAAGCTTTCAGAAGAGAGGCAGTGTGAAGGCAGAGAAATCTCGAACTGCAGTGGAGCTGAGTGGAAAGGTGGTGAAGAGAGGTTACCTGCTCAAACAGGGCCACAAAGTCAAGAACTGGAAGGTGAGATTGTTTGTTCTGCGGGCAGAGCCTGGTTTCCTGCATTATTATGACCCCAGCAAGGATGACGTGACTCCAGCCGGCAGTGTTTCTCTGCGTGGCTGTCTGGTGTCTGCTCTGGATGATAACGGCACACCGGCAGGTGTTAAAGGTAAAGTGCAGGGGAATCTGTTTAAAATCATCACTCAGATGGACACACACTATTACATCCAGGCTCCGACACACGAGGAGAGGATGGACTGGATCCAAGCTATTAGACGAGTCACTTAATTATGCACTTTCAAGCTCAGCGGACTCTACTGGTATTATTTTAACTCATTTGTTATGAATTCGTTTATTTCTGTTATCAGAACTTTCCCATTAAGGGGCAACATGTGCTTTCTAGCATCTTCATATGGGCAGATTTTACAGTTATTATAActgtgttgttgcttttttttgtaCATCATAAACTTAACCGTTTACTTCAGTCAGTCAATAATACACATTGTTGCCAATAACTGATCAAATTTATATGCAAATAACACTTAAAAAGGAATTAATTACAGGCCAGTGCTAAAATATTAGGATGAATTATTGTGCAATATTACTTAATACTTTGATcatgattattaatattgattagtagagtaaataataaatgtatatggcACATTATAATTTGGCTACACACAACACATTAGTCCTGTACATTAGTGTAGCACAATTTATCTCCTATTATAGTCTCTAAAACAGTCTAATTAATCCTCCTACTGTAAATTTCCTCAGCATTTTGACAAGGTGCATTCCAAATGGGATACATCGCTCTCTGAATGGCACTTGGGAGTGATAACAATCACAGATTCCATATTGAAGTATCATTCCAAAATGAAGTGCTTAAATCTGGCCACTTCAAAGGGCCCTTTGGAATATAATAATGATTTCGAAGGATACAACTGATGGACACTTAGTGCCATGATACTTTGAGCAgggatttgtttggtttttacACACTGACTTTAATTAGGAAGGGCTCATCTCTATGCCCTAATTCTTTCAGAGGGACCCTCAGATGGGATTAAGACATAGTGATGAGCCCTTCCCATTGGAATGCAGTAAGGAAAGAGAGTAATCTAACACTACTGATTGGCTACTGCATTCAAATGAAATTTGTGTGATTGATTTTAATGCAATGTGCGTTAATCTGAATGCAATGCGGCAATTGACactcataaaaatgaaaattgagtcactgtttactcactctcaagtggttccaaaccttttgagtttctttattctgtttaacacaaaagaagatattttgaaggatgttgaaAATCGGTAACCAATGActgccatagtaggaaaaacagagTCAaaggaagtgaatggttacagattttcagcgtttttcaatatttcttattttgtgttcaacagaagaaaaagacTCAAGCAGGTTTAAACAGagcaagtgaagtgtgagtaaagaAGACAGAATTTgaaattttgtgtgaactatccctttgtcACACATCTGTTTCTTCACATTCTTGCAAATGTGTTGTATGtgtgcaaataaaataagatatataCAGCGTTACAgtctaaaacagtggttctcaaacgtttttcatcaaataccacctcagaaaaaagcTGTCTTTGCAAGTACCACAATAATGAGctgtattgaaatacagtaccgtattaggtccagtaaagcagctaaagctctgTCCAGTTCAAAAACGAGGGATATTAGTTCCTAATATTGAGAACACTTAAATTATAATgggcttttaaaagttaaaaatggtaggttattgttcttaaaaagtaaacaaagaagaaaaaactcTTGGTTTATCACCACCTgcaaatgtacatatgacatatttgattcatccgcGTACCACCAAAAGGAAGCCcacataccactagtggtacatggaccacagtttgagaaccactggtctaaaacaattaaatattaacaataaatagtaataaaccccaataataaataataaaccctCATCCTAATTagcatgtaaaatatttttatctcAAAGTGTAGGTGGTAAAGCTGTATACATTCAGTGAATGTAAtgtgaaatgtatttaatgaTCAGTGTGAATTTTCCTAGTTTGTTATATCTTACTTTGCAAAGTAaagtttttatttgaa

Function

symbol description
plek2 Predicted to be involved in actin cytoskeleton reorganization. Predicted to act upstream of or within intracellular signal transduction. Predicted to be active in plasma membrane. Orthologous to human PLEK2 (pleckstrin 2).

GO:

id name namespace
GO:0031532 actin cytoskeleton reorganization biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005886 plasma membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080219-2 Predicted to be involved in actin cytoskeleton reorganization. Predicted to act upstream of or within intracellular signal transduction. Predicted to be active in plasma membrane. Orthologous to human PLEK2 (pleckstrin 2).

Ensembl:

ensembl_id ENSDARG00000012789

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012990 True 2995 mRNA 0.39 9 33123484 33134611

Neighbor

gene id symbol gene type direction distance location
XLOC_006745 zfyve26 coding downstream 8550 33066605 ~ 33114934 (-)
XLOC_006744 vti1b coding downstream 68628 33040436 ~ 33054856 (-)
XLOC_006743 rbm25a coding downstream 101112 33017561 ~ 33022372 (-)
XLOC_006742 rbm25a coding downstream 113750 32997020 ~ 33009734 (-)
XLOC_006741 NA coding downstream 126988 32946711 ~ 32996496 (-)
XLOC_006747 TC2N coding upstream 6668 33141279 ~ 33153889 (-)
XLOC_006748 fbln5 coding upstream 20817 33155428 ~ 33207424 (-)
XLOC_006749 golga5 coding upstream 76403 33211014 ~ 33227411 (-)
XLOC_006750 rtf1 coding upstream 94835 33229446 ~ 33246154 (-)
XLOC_006751 nusap1 coding upstream 117110 33251721 ~ 33256667 (-)
XLOC_006471 BX537274.2 misc downstream 22858579 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 32297259 825904 ~ 826225 (-)
XLOC_006738 CU019663.1 non-coding downstream 315843 32793864 ~ 32807641 (-)
XLOC_006731 NA non-coding downstream 556228 32457931 ~ 32567256 (-)
XLOC_006732 NA non-coding downstream 628612 32492067 ~ 32494872 (-)
XLOC_006730 NA non-coding downstream 667491 32069898 ~ 32455993 (-)
XLOC_006752 NA non-coding upstream 126520 33261131 ~ 33301170 (-)
XLOC_006757 NA non-coding upstream 317827 33452438 ~ 33463644 (-)
XLOC_006758 NA non-coding upstream 322912 33457523 ~ 33459318 (-)
XLOC_006768 BX649403.1 non-coding upstream 1504018 34638629 ~ 34638746 (-)
XLOC_006769 BX649403.2 non-coding upstream 1509539 34644150 ~ 34644281 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_07497278_07501713 PLEK2 coding CI01000012 null 7497230 ~ 7502298 (+)