LOC122362636 (LOC107554234,LOC107665407,LOC107713070)


Basic Information

Item Value
gene id LOC122362636
gene name LOC107554234,LOC107665407,LOC107713070
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17498529 ~ 17500517 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264179.1
GTGTGGTTAACCGATATCACGAATATTAATAGGGAAAATAAGATCAGACTCCCGATTGGCCGCCGCCGGAATTAGTCACGTgacaaagcatttaaaagaacaCGCACGACAATCACTGCCCAAAAACTTTGTGAACGCAATCGAGTCTGCATCCCCGAACACCATGAAGACCGTGGCTCTGTTTCtgcttctggctggacttctgGAGCATTCACGAGGCTGGGAGAACAGCTTCGACGGACCCCTGGACTTTAGCTGTCCTGCGGGCCACTCGATCTCCTCCGTAACCAGTGAAAACAGCAATTACCACGAGGACCGGCGCTGGGAGTTTGGCTGCCAGGCCACCTTCGGTCAGAGCGGAGAGTGTTACTGGACGAATTACGTCAATGACTTCGACCAACCGCTGCTCTTCGAGTGTCCGGCTGGATTCGTGATGGCGGGAACGAGCAGCTACCACAACAACAACTACGAGGACAGACGCTGGCGGTTCTACTGCTGTAAAAGCCCGTGTGTGACTACGAACTGCGACTGGACCTCGTACGTGAACGCCTTCGATGAGTTCTTCACCTGGACCGTGCCTTCCAGGAACGTTCTGGTGGGAGCTCAGAGCTACCATCAAAATCACGAAGAAGATCGCCGGTGGAGGTACAAGGTCTGTGTCCAGTACAGATGCTGATCCTGAGATTGTCTCACGGGGAATATTCTCTGAAATAAACGCAAACTAAAAAAGCA

Function

NR:

description
PREDICTED: hemagglutinin/amebocyte aggregation factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264179.1 True 732 mRNA 0.52 5 17498529 17500517

Neighbor

gene id symbol gene type direction distance location
lrch3 lrch3,LOC107735844 coding upstream 16349 17457090 ~ 17482180 (+)
LOC122322924 NA coding upstream 58464 17437151 ~ 17440065 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding upstream 72552 17425154 ~ 17425977 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding upstream 143681 17325966 ~ 17354848 (+)
LOC122362967 NA coding upstream 398967 17079059 ~ 17099562 (+)
LOC122363047 unc13c coding downstream 54693 17555210 ~ 17693234 (+)
pigb pigb,LOC107600388,LOC107708293 coding downstream 269141 17769658 ~ 17776977 (+)
LOC122323000 wtip,LOC107594378,LOC107600421,LOC107734993,LOC107712576,LOC107659186,LOC107662496 coding downstream 387450 17887967 ~ 17917268 (+)
LOC122362789 kiaa0355,LOC107594396,LOC107734949,LOC107668468,LOC107600920,LOC107712582 coding downstream 436513 17937030 ~ 17969461 (+)
LOC122362666 LOC107712581,LOC107668485,LOC107734866,LOC107659171 coding downstream 482961 17983478 ~ 18070581 (+)
G127110 NA non-coding upstream 48728 17449471 ~ 17449801 (+)
G127103 NA non-coding upstream 52465 17444961 ~ 17446064 (+)
G126906 NA non-coding upstream 219944 17278206 ~ 17278585 (+)
G126903 NA non-coding upstream 241166 17256811 ~ 17257363 (+)
G126893 NA non-coding upstream 326224 17172005 ~ 17172305 (+)
LOC122322999 NA non-coding downstream 15142 17515659 ~ 17520724 (+)
LOC122323095 NA non-coding downstream 21107 17521624 ~ 17527930 (+)
G127195 NA non-coding downstream 194817 17695334 ~ 17695593 (+)
G127207 NA non-coding downstream 248874 17749391 ~ 17750176 (+)
G127208 NA non-coding downstream 249835 17750352 ~ 17751251 (+)
serp1 NA other upstream 42872 17454154 ~ 17455657 (+)
G127098 NA other upstream 86936 17410685 ~ 17411593 (+)
LOC122322904 NA other upstream 189371 17303769 ~ 17309158 (+)
LOC122362575 NA other upstream 327194 17129922 ~ 17171335 (+)
G126884 ctxn2 other upstream 421370 17074194 ~ 17077159 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other downstream 308084 17808601 ~ 17814422 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other downstream 383101 17883618 ~ 17887211 (+)
G127258 NA other downstream 422411 17922928 ~ 17928165 (+)
G127292 NA other downstream 638018 18138535 ~ 18140253 (+)
G127456 rps3 other downstream 1059446 18559963 ~ 18563152 (+)

Expression


Co-expression Network