LOC122362666 (LOC107712581,LOC107668485,LOC107734866,LOC107659171)


Basic Information

Item Value
gene id LOC122362666
gene name LOC107712581,LOC107668485,LOC107734866,LOC107659171
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17983478 ~ 18070581 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264208.1
tctatctatctatctatctatctatctatctatctatctatctatctatgtcccTTCCCTCCAAACCCGTATAGTATCCTCGTTTGTAACAGGGGGACAACTGTTTGGTTTTGGCCCTCTGACGTCACACCCATTCCCACAATGCCATAGTAACACGACTGCGCACTCGCGCTCGTGGACGCGCACCAGCAGAGACAGCCCATCACACACAGAGAGCGAACATGGCGGGCGCCTCCGACCCTCTGGAAGACATGCTCTTCTCCGAGGTGGACGAGAAAGCCGTGAGCGATCTGGTGGGCTCGCTGGAGTCTCAGCTGGTGGGCGAGAGCGAGCCGCCCGCCGCGCGCCAGAGCAGCgcgaagcagcagcagcagcagcagcagacagGAGGAACCGCGCAGCTGCCCGCTCCTGTAGACTCTCCATCAGAACCACAACAACAAGCGCAGCAGCAGAACGCGCGGAAAGCGGCGCGCAACCCGGATCCTGACCCGAAAGACGCCAGCATGGACAAGCACGCCAAAGCCCTGGAGAAGGAGAGCCCCCTGAAGACGCACGGCggcagcatcatcatcatcaccacggcggcggcggcggcggcagcaTCCGACGCTCCTGCACCGGGCAACAAAGGTGAGAGCCCGAGGGACACCCGCAAGAAACACCCGGGGAATACGCGCACGCTGCGCTCCGCGGCGTCCCACAGTCTGAACGGCAACGGAGGCGGCGCGGCGTCGGCGTCGGCATCATCCCCCAGCACCTCCGGCACGACTTTCACCGTGTCCAGCAACCCGCAGGCGATCGCGCTGGACCGCGGGACGCCCACCATCGCGCTGCACCGGCTCCCGCGTCACATCATCGCCAGCATCGCGCAGAACGGGAACGGCACGTCGGTGTCCGCGCTGGTCCAGCAGGGCGCGCGGATCAACCACAGCAAAACACCCGCGGACGGCAACGCGAAGCCAGCGGCGGCCAGCCCGGTCACGGCGGCGCCTGTCAAAGCCGCTGTCAGCGCGGCCGCGGTCATCAGACCTGCGCAGACCCCGACGCAGGCGGCTGCGCAGCAGAGGGTCGTAACGCCGCAGCTGATCGTCAGACCGCCGCAGCAGCAAACCACTATACAGCTGCCTCCCGGCTTCACCATCCCACCAGgtaTGGTGCTGGTCCGGACAGAGATGGGTCAGCTGGTGATGGTTCCTCAGCAGGCTCTGGCTCAAGCTCAAGCTCAGAACAGCATCTCTCCTCGGCCCTCCACGCCCACCAGCGTGGCCACGTTCAGGGTCACGACCCCACAGtctccTGTTAGCGCTCAGGCGATTCGTCCTGCTCCAGCCGCTCAAACTAAACTGGTCCAGTCTAGTTCACCGAGCTCCACGGCCCAGACCAGCAGCTCAACCTGCCCCGCTAAGGCCCCCGTGGCAGCCGCCGTGGCAGTGACAGCTCCCCAGCAGGTCCAGCCGGCCTTGGGCCCCCAGGGGCCCCTCACTCAGATGCCACTGGCCCCGCAGAGCGCAGCCGCCCCGGCCCCCGGAGGTCCGGTCGTCTCCCAGGAGATGCAGGAGAACGTGAAGAAGTGCAAGAACTTCTTGGCGACGTTGATCAAGCTGGCGTCCCATAACTCCCCGTCCCCGGAGACGTCTCGAAACGTCAAAGCGCTGGTGCAGGATTTACTGGACGCCAAGATCGATCCGGAGGAGTTCACCAGCCGCCTGCAGTCGGAGCTGAAGTCGTCTCCTCAGCCGTACCTGGTCCCTTTCCTGAAGaaaAGTCTCCCCGCGTTGCGTCTGTCTCTTCTGAACAGCCAGCAGTCTCTCACTCAGCCTCTGCAGCCCAACAAGACGAGCGTGACGCCGGTCCAGACGCCGGTCAGTGTGCGTCCGCACCAGCCCAACAGCACCACCGTACTGCCACAAGGTATCAAGAGGGCAGTGGGGCCTGGAAGTCAGATACGGATGCCTGTGGTTATAACGCAGACGGTGCGAGCGACGGGTGCTTTAGGGAAGCCCTCGGCGATCCAGACGGGCAAAAGCCCCGCGGGCGTAACCATCCAGCTCTCAGGAAACCAGAAAAACAAGCTGAATGACCCGGGAGGAGGCTCGTTCAGAGACGACGACGACATCAACGATGTTGCGTCTATGGCCGGTGTGAACCTCAACGAGGAGAGCGCGCGCATTCTAGCGACCAACTCCGATCTGGTGGGAACGCAGATCCGCTCGTGTAAAGACGAGGCCTTCCTCCCCGCGGGCCTGTTGCACCGGCGTATTCTGGAAACAGCGAAGAGGTTTGGAGTGACGGACGTACCGCTGGAGGCTGTGAACTTCATCTCTCACGCCACCCAGTCCAGATTACGAACAGTGCTGGAGAAAGTCTCCTCCATCGCCCAGCATCGTATGGACTCGTGTAAGgAAGACGAGTGGTACGAGCAGTCGTCTGATGTGCGCTCACAGCTCAAGTTTTTTGAGCAGCTGGAACGGATGGAAAAGCAGAGGAAAGATGAGCGAGAACGAGAGATTCTCCTCAGAGCGGCGAAGaGTCGCTCGCGGCAAGAAGATCCAGAACAAGCCCGTCTGAAGCAGAAAGCAAAGGAGATGCAGCAGCAGGAACTCGCCCAAATGAGACAACGAGACGCTAACCTGACGGCGCTCGCCGCCATCGGCCCTCGGAAAAAACGCAAAGTGGACTCGCCAGGAGCAACCACGACAGGCACTGAGGTGTCGGGGAGTTCGGCAGGTTCTCCGGGCGGATCGTCGGCCCCGTCCAGCTCGTCACGGCAGTACAACCGCCAGAGAATAACACGCGTCAACCTCAGGGACTTCATCTTCTACAtggagcaggagagagagaccAGCAGATCTCTCCTGCTGTACCGCGCTCTCCTGAAGTAGCCGACTCTCCACGCCACAGAGGAATCAGCAGCCAAACCCCGAGCAGACGTTCACCCCAACGACCGACTTCCTTCTCAGCCCTGCGACGTGCCTTCAGCCCCGTGTCCGTGACCTCGTGATGTCAGCGTTGCTTTTGATAGAAAAgctttgaaaaaaagagaagaaaaaaaaaaaaatgaagatgtgCTTCACGTTTCCTGTTTTCTCCTCAGCGTTGTTAGgtaaactgtatttatgataGTGGATTTTAACGCTTGTTTCTCCGGCTTCGAGCCAAGGAGCGTTTTTCGTTTGTTCGTGAACGAATGAATCTGACTGCGATTATGGCTTTCTTCATCAGTGTTCTccagtaaaaacaaaacgtaCATGAAGTGTAAGTTAAACATATCGATCGAATTCACGGCCTTGTTTTGGTTTCATTGGGATTGCGATTGGGTTTGTACGGAAACTAGGGAAATAATTATCACCATTTATTAAAACGAGGGAACAAATAAGTAGACCGTACAAAATAAATCCTTAAAATGAGAGAAAACGTACTGGCAGCTCGTTACACAGGACGTTAGACGTTCATTTTGTGGATTTCTGTTAACTCTAAAACTAGAAATACTGGTAAAATATACGGTATATTGCGCCCTGTTTttacagatttagttttttggaGTGTATAATGTGGCTTAAATCAACTAAAACGAGGGAACTAGTTGGTGCCAATTGGCAACATTTACTTAAACAAGGAAATAAATGAGCACGAAATTTGCCGCAATTTAGAAAACGAGGAAATTGGTAAGAATTCGCAACGATTTGTTAAAACAAGTGAATAAATTAACACAGATTTGCCACAATTTTCTGAAACCATGGAACGAATTCATCCACGTTTGCCGTGATTTACTAAAACAGGGAAATGAATGAGTGAACAACTACtgagaattaatttaatttacaaatttgTCGCAATTTGCTAAAACGAGGGAACAAATTAATACACGTTTGCCACAGTTTACTAAAATAAGGGAAGAAATTGGTATAGATTGTCATCGAAAGCAGTCAAATGTTCCAAAATTTACCAAAAAGGATGAAATAAATTAGTAGAAATGTGGCACGGTGATCAAGGGAGTGAATTAGTGTAGATGTAAAACAAACTTGCATggttttagtgaaaaaaaaaaaaaactagtttgcACAAATTTGCcttgatttattaaaacaatggaaaaaaccttttttccaATTTGCTACGATTTACTGAAACGAGGGAACAAACTAGGACAAATTACCCCCGGTTTACTAAAACCAACAAATTACTACAGATTTGCCACGATTTACTAAAATAAGGGAAGAAAGTGGCATTAATTGGCAATGATTTACTGAAATGATGGTTTTGTACGAATGCGCCACTGTTTACTAAAACGATGGAatgaattcatacaaatttgccatgatttactaaaaaaagaaaatgaattatgCCAAAAACTGGCTAAAATAAGGGAAGAAATTGACATAAATTGGCAATGATTTGCCGAAATGATAAAACGAGTCCAATTTGCCCTGAATTAAAAGAGTAGAAATTCCGctcaatttgtttatttaaaaataatcttcaccacatttgatttatttgggcttttaaaaagaatatgaaaatatttgatgcttttttgctttttccgTATAATATTTTTGACTTCTAATTCTGATGAAGTGAGTGTTTTTCGCAGTGCAGATGTCGTTCTGGTGTATATTCAACACGGAGCGCTTACAGTGACGATCTTTGAGACGAAACGCCTTGAAGTGACCTGTGTACTTTCTGTTAAAGAATCGTTCTTTAAACCTTATGCAGACTTTCCCGAACATGATCATCttcgtcatcatcatcaccatcatcatcatcaccatcatcagtGTCCAGCCAATCACAGTATTTAAAACCCCGTAAAAAGTTGACTAAAAACTCTTTTTATCAGCAAGAACTCAATGTAAATAGACTTTTTGATGAGTATGGTTTTTAATAGCATGTATAAATGATTTCCAGATGAAAATAACGTTTTAAACCGCTTTTAAATCGATCATGAAGCTTGTGTCCGTCATTGTGATTCGTGCAGCTTTACCACGTGTCCACGAGGAGCACGGATCCCGTGTTTCCCAGAATCAGGCCAGCAGATCTGAGCTATAGCAATACAACCGCTCCAACGCATCGCCTCGAACGTTAAAAACCACGCTTGACGCTTCTCCCAATCGGTTCAATCAGAAAAGGCCAGACTTTCCCAACCGGTCCCAACACTTGCTCGTTCCAGAATGCAAAGGCGAGCGTTTTAATTTCGGATAGCAATCGATCgcattaaaggaatggttcgcCCCAATcgttggtcaccattgacttccatagtagggaaaaaaaatactatgggagtcaatggtgagCCAAAACATCCTGGTTATAAACTTTCTTCGGagtatcttcctttgtgttcatgCAACTCGAAAATTCAACCGTGAATAACAAAACAATTCGAGAGCGAGTAAACGGCGGCGGAagtaaaatttttgggtgaactattcctttaacactAGAAACATgcattaagtgttttttttattatttggacTGTAAAACTGGATTTCACTTCCCTCGTCTGTTTTAATTCTACACTCAGTATTATCGGTTCTCCTACGGTATTAATCTTATCGGCGTCGGTCCTTCATTCATCATCCATAAGCTCGATTGTGAGGAAGAACTTGAATCCCGTAAGCGTTTATTTTGGCGAGGGTTCGCCGTACACGATGTCAGGAGAGGTCAAGTTCCGCGACCTTTCTTCATTCCGAGATCCTCTCGCTCTTCTATGCACCGTCATGAATCCCGTCGCTTTGCCGTTTTGTGTTTGCGTGTGAAACCGAACGTCTCGGCTTGGTTTCTCCGTCTGTGTCCGTCAAACTCTAAAAGGGAAACTTCGTTTTCTACCTATTTCTATTTTCTCATGCACATCCCCGACAGTCCCGTTCGAAACAAgcacaaatgtatttgttgGGTTGTTTAAACCGATTTTATTAATCTTCTGTTTTCCGCTGGAGGCTCTTTCTATGACTTACGCTTTGTAGCCAAAATATTATTAGGACTCTCTTCATATTGTATTACTGACGTGCACAGCTGGAATTTAATGTTTCGATCTACGGATGATTTGTATATATTGTTTACAAGACCTTGTGTTTATTAGAACTATCTTATTTTTGGTAAATTCTGTACATATcctgaaatatttctgtttgtgtgAACATACTTCTGTATTTGTACCTATTTTGTAAAGGAATAAATAAGCTGTTTACTAAa

Function

NR:

description
PREDICTED: transcription initiation factor TFIID subunit 4-like isoform X3

GO: NA

KEGG:

id description
K03129 TAF4; transcription initiation factor TFIID subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264208.1 True 6210 mRNA 0.49 16 17983478 18070581

Neighbor

gene id symbol gene type direction distance location
LOC122362789 kiaa0355,LOC107594396,LOC107734949,LOC107668468,LOC107600920,LOC107712582 coding upstream 14017 17937030 ~ 17969461 (+)
LOC122323000 wtip,LOC107594378,LOC107600421,LOC107734993,LOC107712576,LOC107659186,LOC107662496 coding upstream 66210 17887967 ~ 17917268 (+)
pigb pigb,LOC107600388,LOC107708293 coding upstream 206501 17769658 ~ 17776977 (+)
LOC122363047 unc13c coding upstream 290244 17555210 ~ 17693234 (+)
LOC122362636 LOC107554234,LOC107665407,LOC107713070 coding upstream 482961 17498529 ~ 17500517 (+)
pepd pepd coding downstream 206783 18277364 ~ 18334482 (+)
ugt5f1 LOC107709391 coding downstream 268562 18339143 ~ 18343857 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding downstream 268618 18339199 ~ 18386930 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding downstream 323022 18393603 ~ 18460809 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding downstream 449410 18519991 ~ 18523564 (+)
G127268 NA non-coding upstream 2137 17977675 ~ 17981341 (+)
G127263 NA non-coding upstream 8976 17972550 ~ 17974502 (+)
G127233 NA non-coding upstream 49659 17794861 ~ 17933819 (+)
G127243 nedd4,LOC107735005,LOC107712575,LOC107659054 non-coding upstream 125329 17857012 ~ 17858149 (+)
G127242 NA non-coding upstream 127667 17854650 ~ 17855811 (+)
G127413 NA non-coding downstream 281159 18351740 ~ 18352103 (+)
G127431 NA non-coding downstream 415276 18485857 ~ 18487271 (+)
G127434 NA non-coding downstream 421416 18491997 ~ 18518461 (+)
G127439 NA non-coding downstream 431860 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding downstream 456548 18527129 ~ 18528342 (+)
G127258 NA other upstream 55313 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 96267 17883618 ~ 17887211 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other upstream 169056 17808601 ~ 17814422 (+)
serp1 NA other upstream 527821 17454154 ~ 17455657 (+)
G127098 NA other upstream 571885 17410685 ~ 17411593 (+)
G127292 NA other downstream 67954 18138535 ~ 18140253 (+)
G127456 rps3 other downstream 489382 18559963 ~ 18563152 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 575781 18646362 ~ 18652164 (+)
G127500 NA other downstream 660109 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 1199030 19269611 ~ 19288556 (+)

Expression


Co-expression Network