LOC122362747 (kifc3,LOC107670565)


Basic Information

Item Value
gene id LOC122362747
gene name kifc3,LOC107670565
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16090090 ~ 16115844 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264308.1
GCGACCGTTTGGAGTTTGCACAGTCGTATGGACAAAAAACTGGGATAAGGACTATCAATACCAGGCATTATGAGAGAAGGAGTGGACTGACCTTTAAGAGTTTTATTCCTGCAATCCAGACcctgtaaaaaatacaataaaaccatTAGTGACTCAACAGGAGGCGAAGATTTGTTGGACATCAGCTTGTGCCAGCGGAGGTTATGGTTCAGTTTTGAAAAGGAGATTTGTGGATTCTCTGGAATACACCTATATTGTTATCCAGGTTAACGTTGGACGGAATGGATACGTAAGAGATAAGGACCCAACATTCAGAAGCTATTCCTGATTAGCTAACTAGTCATCTATTATTCTGCACGTTTGCGTGTGTTTGCATTGGCTTGTTTATCAGGGTGTGTCTTTATAGATGTGTCCAGGTAAGCTTTGTGGGGTTTAAAAGCAGGTGTGCATTAGTTGGCCCTCCCTCATCCTCCCTCAGAATGAGAGATGAGCGCAGCCATCTCATTTGCTGATCAGATCACGGACAGATTATCAGTCTAAATGAGCATTAGAAGTCGTCGAGCTCTGGGGTGTCTGAATAACGTGCTCTGCGTGTGAATACTGGCGGGGAAACAAGCTTTTTGGACTTTTTGGACTTTAGTTTGACACAATCTCACCTTTAGACCGGGCAGCACAGTAGAGCTGATATCAGGACTGTAACTTCAACCAGAAGATAGGGTTCTCTGCTTGCGGTGACCCTGAAACGGGATCGGCTGGAATGACTTTTAAAGGATactccatctctttctctgGCTGAACGTGTCGTTAGACCTATTTGTGACTCTTAGTCAGTGCTGCCATGTATGTGCTTTGCACACTGGTGTTGCTGTCTCTCCACAACCTGTTTAAGAGACCCAAAGTCCAGGAACCCTTTGAACCCAAGGCTATTGAGGGTCCCGAGCAGCACAGACCAGATGTTCCCAAACTGGGTCGCAAGAAGAGGAACAAGCACCACTTTCATGAAGGTTCTGGACCGGTAGAGACCTCAAGAGTGTCTAGACAGCATGACTTTGAAAGATGCTTGGATGGACCCAGCAGAGCAAGTAAAAGAAGATCTGTGCACCTGGATAATGCGCATGAGAGGAGAAAGAAATCACAGCCGGTCCAGCGGTGTGGTCTGCTCGGCCCTGCGGTCATGTACGGCACAAGAAAGACCTGGGACGTCGGCCACACCCCCTGCCTGCAGGAGCTTTGGAACAAAGACCTCTCATTGGATGTTTCAGCGAGTTCCCTGGATATCCTGATGAGTGATGGTGAGGAGGAGAGCTCCTTCCTCTCGTTGCCCAACACTGTCCTTCAGCGCCActgtttgacctctgacctctctgaAACGGCCACCTCAGAACAGCAGAAGCTGCTCATACAGACTCTGCAAGAGAGAGTTTGTGAGTTCCAGGCACGTTTGCGAAGCGAAGACGCTGCAAAAAGACTCCTGCTGCAGCGACTGCAGACACACGACCGCCAGCTCAACCAAGACATCCACCAGAACGACGAACATTCGTCCATTAACCAAGAACCTCGAGAGCAGCTCAGACTGCAGGACGGCCAGCTCAACCAAGCTGCGTCACCGACAGgtgtGAGGAGCTCTGGTGTTTTGACACAGAGACCTGTGGATTTTCCCAGTGCTGTGCAAGTGAGTAAAGTTCACTCACAGGAGCAACTGCAAAAAGACAAGGGAGAACAACTTGCTCTCATTACAGGGCTGCGCACACAGGTCAAGGAGCTGGAGGAGAAACTATTGGATCAGACGCAGGAGGTGGAGAGACTGCGCTCTGAGCTGgGGGCGACAGATCTGGAGAAACAGCTCGAGGTGCTGGAGAGTGAGAACCAGCGGCTCAAACAGGAGCTGAAGGCCAGTCAGACTCAGACCAGCTGCTCTACCAGCCACTGCCCACACAGCCAGGATGTGGAGGCCCTGCGAGGAGAGCTGTGTCGTAAGGACGAGGAGTGCCGCGAGCGGGAGCGGAGGCTGGCTGCGCTGGAGCAGCAGGTGCAGGAGAGGACGGGTGTAGTAGTtcagctgcagcagcagctgGAGGAGGCGGCGCAGCGCAGACACCAGATCCAGCTGCAGCTTGAGGAGGCGTCACGTCTCAGGAGCCAGAGCGAGGAGCAGCTGACCTCACGGCTTCAAGACGCCGAGGAGGCTCTGTCTCGCCAGGCTGTTTTGACACCACACGTCAAGATTGTGACCAAGACGGTTGAAGTGGAGTCTGCTCAATGTAAGCAGGCTTTGATGGAGGCTCAGGCCCGTAACCAGGCTCTTCAGGAGCAGCTGAGCGTCCAGAGGCAGCTCCTCAGAGAGCTGGAGCAGCAGCTGCACGAGTCGCAGAGAACCAGCAGTCAGCTCCGCCAGCAGCTGAGGACGGACCGCGGCCGTCTGTATGGCCTGCTCTCCAAGGCGGTGGGTGGGGGTAACAACGAGGTCACCCACAGGCTCTCCAAGatccTGGTGTATGAGGGTGAGATGGAGAGAGCTCAGGGTCAGCTGGAGGCAGAGATGCAGAGtctggaggaggagaagaaccGAGTGATCGAGGAAGCTTTCATCAGAGCCGAGAGTGAGATGAAGGCTGTCCATGAGAACCTAGCAGGTGTGCGGATGAACCTCCTGACGCTGCAGCCGGCTCTGAGAACCCTCACCTGCGATTACAACTGTCTGAAGAGACAGGTGCAGGACTTCCCTTACATGCTGGAGAAAGCCATCTCTGAGGCGAAGCAGGAGATCTGTCAGGTGATTGGCGAGGTGAGCAGCGCGAACCAAGAGCTGCTGCGCAAGTACAAGCGAGAGATGAACCTGAGGAAGAAATGCCACAATGAACTGGTGCGCCTCAAAGGAAACATCCGCGTGTTGTGCCGAGTACGTCCCATATGTGCTGGAGAAACGGATGCTGCTGACACCAAAAACatagtgacctttgaccctgacGATGATGCTGTTCTTATCTTGTCTAATAAGGGCAAGCTCATGACCTTTGAACTTGACAAAGTCTTTCCCACTCAGGCCACTCAGGAGGAGGTGTTCCAGGAAGTGCAGTCTCTGGTCACTTCCTGTATTGATGGCTTTAACGTATGCATCTTTGCCTATGGGCAGACCGGCTCTGGAAAGACCTATACCATGGAGGTATGTCATGTTGCCAAATTTCATCCTCAAactaacaaaaagaaaGTCAAATTTTATTACATGTATAATGTGTGTATCATGGCCTATGGCCAAACAGGCAGTGGAAAGACACACACAATGATTGGCTCTGAGGATCCTACAGCTGCAGTGCAGGACTCTCAACAGGGCATCATTCCAAAAGCAGCCAATGAGCTGTTCAAGCTGATCTCTGAGAAGCCAGCGGACAGTCATACGGTGGAGATGTCAGTGGTGGAGGTCTATAATAATGAAGTTATGGACCTTCTGGCCAGAGATGAGGATGGGGTGACAGTTGGGGTAAAGAGAGAAGTCATCACCACCAGCACAGGCACCAGCGAGGTGCCCTGCCTAACATATGAgttgGTGCGGAGCTCTGCAGAGGTAATGCAGCTGATCAATTCTGTGTTAAAACTAAGATCTCACAGTCCCACCCTGGTGCACATGGACTCCTCCAGATCTCATTTCATCGTCACTCTCACCGTCACCTCCAAAAGCCCAGATGCACTGGCTCTAGCTCGTCGTCTGCAGAACGCCCGACAGGATGTCCAGCGGGTGTCTCAGAAGGAGTGGTGGAGCCCACGCTGCCGCAGGGCCGCTTCCTCACGCTCGTCTAGCCCCGCCTCCTCGCCGTGCCACTCCCCCTCCCACTCACCATGCCCCTCCCCCCGACCCAGCATCACACAGCCCCCCATCAAAACCAAGCTGCAGCTGGTGGACCTGGCTGGGAGCGAGTGCGTAGGGATGTCAGGTGTGACCGGTGCGGCTCTGTGGGAAAGCTCCTGTATAAACCGCAGTCTCTCTGCTTTGTCTGATGTTCTGGGAGCTCTGGCTGAAAGACGACCTCATGTACCCTACCGCAACAGCAAACTAACACATCTACTACAGGACGCCATAGGAGGGGATGCCAAGCTTCTGATAATGCTGTGTGTATCTCCCACTCAACGCTTCCTCACCGAATCTCTTCAGTCCCTGGGGTTCGGTGCCCGAGCCAGACAGGTTCAGAGAGAGCCGCCACGCAGGAAAAACACGGCTCTGAAGATGAAGTAACCAACGGGGAGATCCATTTGATAGCtgcttgtgtgttttcatttgtacGAATTTTGGTCACAGGTTTATGGTGCTCAGGTCATGTTGAAAGTTGCAGTGCTTTGTAACAACACTTTAGGGTTATGTTTATGTTCATAGTTAATACGTGTCAGTGATTTGATTcagtattgtaatttttgacAATCTCTTGCACACTGGGGATGTTCCtctgataaaatgtttacagGTTTTTGTGTCTAGTGTGAGTGGAATACTTCAGATTATGTGTGTCTGCAATTAACCATTAGTctgtactaaaatatttttgtggtgatGAATAACGTATGGCTTTTAAAGTAACAGTGTTTGCAACCTAACTCTAGTTGACCTTATTTGCAGCAAAATAACGCCTTTCCAGTGTATCACGATTTATGAATGttcaaaaaaagctttaaatttaataaaatttacagtaaatca

Function

symbol description
kifc3 Predicted to enable ATP binding activity; microtubule binding activity; and minus-end-directed microtubule motor activity. Predicted to act upstream of or within microtubule-based movement. Predicted to be located in microtubule. Orthologous to human KIFC3 (kinesin family member C3).

NR:

description
PREDICTED: kinesin-like protein KIFC3 isoform X5

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264308.1 True 4687 mRNA 0.51 22 16090090 16115844

Neighbor

gene id symbol gene type direction distance location
LOC122362951 cngb1a coding upstream 4676 16075471 ~ 16085414 (+)
LOC122362746 cngb1a,LOC107670565,LOC107679572 coding upstream 14666 16063967 ~ 16075424 (+)
zgc:158464 LOC107572397,LOC107740353,LOC107692470,LOC107599765,LOC107711356 coding upstream 51179 15955905 ~ 16038911 (+)
ubl7b LOC107668695,LOC107579017 coding upstream 275237 15810671 ~ 15814853 (+)
insyn1 LOC107692472,LOC107740352,LOC107656969,LOC107722291,LOC107581104 coding upstream 419933 15613403 ~ 15670157 (+)
LOC122323208 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding downstream 147 16115991 ~ 16118762 (+)
hdgfl3 LOC107726337,LOC107595369,LOC107665298,LOC107703942,LOC107754858 coding downstream 213865 16329709 ~ 16334460 (+)
homer2 homer2,LOC107569981,LOC107595365,LOC107703939,LOC108414443 coding downstream 222201 16338045 ~ 16348905 (+)
LOC122362844 fsd2,LOC107726333 coding downstream 246401 16362245 ~ 16368810 (+)
zgc:158482 LOC107727401,LOC107703947,LOC107569985 coding downstream 295521 16411365 ~ 16419019 (+)
LOC122362955 NA non-coding upstream 31116 16058534 ~ 16058974 (+)
G126626 NA non-coding upstream 86272 15999452 ~ 16003818 (+)
G126605 NA non-coding upstream 261737 15825427 ~ 15828353 (+)
G126591 NA non-coding upstream 269760 15760963 ~ 15820330 (+)
G126458 NA non-coding upstream 1023513 15066346 ~ 15066577 (+)
G126711 pimr50,si:dkey-1p9.2,pimr51,LOC107716905,LOC107600734 non-coding downstream 92740 16208584 ~ 16211583 (+)
G126716 homer2,LOC107569981,LOC107703939,LOC107595365 non-coding downstream 151170 16267014 ~ 16364205 (+)
G126722 whamm,LOC107595364 non-coding downstream 239387 16355231 ~ 16361646 (+)
LOC122362848 NA non-coding downstream 260594 16376438 ~ 16378666 (+)
G126743 gatm,LOC107726335,LOC107665388 non-coding downstream 289611 16405455 ~ 16406624 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 34463 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 136437 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1042197 15035383 ~ 15047893 (+)
LOC122322993 LOC107709552 other upstream 1179933 14906616 ~ 14910157 (+)
gemin7 NA other upstream 1261798 14826788 ~ 14828292 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other downstream 147995 16263839 ~ 16271267 (+)
G126820 NA other downstream 637865 16753709 ~ 16818399 (+)
G126884 ctxn2 other downstream 958350 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 1014078 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 1187925 17303769 ~ 17309158 (+)

Expression


Co-expression Network