LOC122362752 (LOC107665215,LOC107595393)


Basic Information

Item Value
gene id LOC122362752
gene name LOC107665215,LOC107595393
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17067094 ~ 17069819 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264314.1
TAATTAGTTTGTGATATGACTGTGTGTCAGGTAGCGATGCAGAACCAGATCAACACTAACCCGGAGAGTCCAGACACGCTGACCATCCACACGGCTCCGCAGTTCATCATCGGCCCGGGAGGAGTGGTCAACCTCGCTGGACTCGTCTCGCCCGCCAGCAGCGGCAAGTCCACAGTCGTAGCTGCAGAGGAGTTAATCACCGCAGACTCCGTCGACGGTGCCATACAGCAGGTCGTGAGCTCCGGAGGTCAACAGGTCATCACCATAGTAACCGATGGCATTCAGCTGGGCAACCTGCAGACGGGCACCGGCATCAGCCAGCCCATAATAGTCACCATGCCTGATGGGCAACAGGGTGAGAGAAAACAGCTCAAtGAGACGGTGATCAGCGAGGAGCCGTGTGTTAAGCGTCAGCGCGTGAAGGAGGAAGACGACGATCAGACAGAAGCACAAGACGCTCAGATCCAGCAGACGCTCTCGCTCGAGGACTTCCAGGAGAAAGTGTCTCTTCTGAAGCAGCTGGAGGAGGCGAACCGCGAGGCTCAGAAATACAGACAGCAGTTCCTGAAGAAGGAGCAGGAGGCCGAGGCGTACAGACAGAAGCTGGAGGCCATCACGCGGCAGAGCGCCAAGAAAGCTGCGTGAAAACACGCCGGACATCCGCTTCTGTGACTGAATCCTCATCGTTCATCTCCTTCATGAAGCGCCTCAGCTGTGGTGCTCGTGTGGCCGACACGGGTTCGATTCTGACCCACATCCCACCTTCACCAGCCTTTCAATAAAGAGACAAAAACTCCTCAAAACCCGAACGAGGGATGTGTGATTGTAGAGTAATGTCGGATTTCTAGATGCACAGTAAAAAACAGAGTTGAGAAAACGTAAACGTTTAAGCAGGCAACCAGCTTCAGGAGACTCCTGAGTTTTCGAGAAAAACCTTAACCTTAGATTTTTTTGACCTGCAGGTCGCGTCTGATCGAATTCATCACCGAATATCAGCATGTTTCTAGTGTCCTCCTGCTCGCTGTTTGTGATGCATTTTCCAGGATTTCTGTCATAAagattcttatttttaaaagaca

Function

NR:

description
PREDICTED: GA-binding protein subunit beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264314.1 True 1079 mRNA 0.52 5 17067094 17069819

Neighbor

gene id symbol gene type direction distance location
LOC122363001 NA coding upstream 95730 16958824 ~ 16971364 (+)
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding upstream 237740 16819287 ~ 16829354 (+)
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding upstream 277421 16780682 ~ 16789673 (+)
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding upstream 348936 16705581 ~ 16718158 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding upstream 389028 16618170 ~ 16678066 (+)
LOC122362967 NA coding downstream 9240 17079059 ~ 17099562 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 256147 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 355335 17425154 ~ 17425977 (+)
LOC122322924 NA coding downstream 367332 17437151 ~ 17440065 (+)
lrch3 lrch3,LOC107735844 coding downstream 387271 17457090 ~ 17482180 (+)
G126881 NA non-coding upstream 33754 17031550 ~ 17033340 (+)
G126879 NA non-coding upstream 43724 17021386 ~ 17023370 (+)
G126875 NA non-coding upstream 49569 17015532 ~ 17017525 (+)
G126867 NA non-coding upstream 51769 17013758 ~ 17015325 (+)
G126865 NA non-coding upstream 91709 16973711 ~ 16975385 (+)
LOC122362576 NA non-coding downstream 66816 17136635 ~ 17139135 (+)
G126893 NA non-coding downstream 102186 17172005 ~ 17172305 (+)
G126903 NA non-coding downstream 186992 17256811 ~ 17257363 (+)
G126906 NA non-coding downstream 208387 17278206 ~ 17278585 (+)
G127103 NA non-coding downstream 375142 17444961 ~ 17446064 (+)
G126820 NA other upstream 248695 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 795827 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 1011467 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 1113441 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 2019201 15035383 ~ 15047893 (+)
G126884 ctxn2 other downstream 4375 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 60103 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 233950 17303769 ~ 17309158 (+)
G127098 NA other downstream 340866 17410685 ~ 17411593 (+)
serp1 NA other downstream 384335 17454154 ~ 17455657 (+)

Expression


Co-expression Network