LOC122362762 (LOC101886557)


Basic Information

Item Value
gene id LOC122362762
gene name LOC101886557
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19624212 ~ 19625612 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264321.1
ATGGAGGTTAATGAGATTATTGCATGGTGCAGAGAGAAAAACGTTGAGTTGGACAGAGTTCTTATTTTAAGCAAGGTGCCTACAGACTGTGATGACAGAGTAGTCTATGATGTGCTGGATACTGTTCTGGGGATTGGGAAATGCAAAGTGCTTGATCGTCACTCTGATGAAACTAAGCaatatcagtttattttgattgaaaTAGCTTGTAGCATCTCCGAGATATCTATTCCTTCAGAGATTGGAGGACCTGAGGTTGGTCCCTGGTACACGCAGGTCGTTCATGTAGCAGCTGAAACCCCTaagcagagagaggaagagttCCAGTCTAAATTGATCTCTTTCCTCCAAAAAGAGGGCAAATCATTAGCTGACATCCCAAGTGTTGTTTCCCCTGCACCTGACCTCAACACTAAATTAGTTGATGCCATAAACTCTCTTGTCCAAACGTGTCATGTGGCTTCATCAGAGGAGAGAGTGGGATACAGAAGGCTGCGTCCTTTCTCAGGATTCATACCAACTCCTCCTGGGGAAGATGAGTATGAGGTTTGGGTAGAGCAGACTACCCACATTCTGGAAGAATGGCAGTGTTCTGATAATATCAAGAAGCAGAGACTTGTAGAGTGTCTCAGAGGTCCTGCAGGCGATATTGTTAGATTTGAAAAGACTGGAAACCCAACTGCTACTTTCAGTGATTATCTCAGTGTGCTAGAGTCAACATTTGGCACTACTGAGGATGCTGCTGATTTGATGTTAAGGTTTCGGAGCACTTACCAGAATGAGGGAGAAAAGCTCTCCGCCTACATACTGAGGTTGGACAGGATGTTGCACAGTATGCTAAGGAAGAAAGGCATAGAATATTCTGCCCTGAATCATCTTCGAATGCGGCAGATTGTCAGAGGTGCCCTGTCAAGTGATCTGGTGGCTATGCGGCTGAGGATGACCCATAAGCTTTGTGCCCCTCcttcttttaatgaattaatgaaagaagtgagagaagaagaaaacataGCGAACAGCCGGAGTTCATTACAGTCTAAAGTAGCCGTGTCTGTAGTGTCCTCCGCCAAGAAGGAGTCATCTGCTAATACTAACCTTGCAGACTCAGAAATAGAGAAGCTGAAAAGGGAGATTAGGGGGTTGAAAAATGAAGTGTCACGCTTGTCAGCTGCAGCAAAAGAACCTGTAACCCATGATCGTCCTGCTATGCACAGTCTATCTGCAACTGCAGAGAGTAAAACAACAATAAGACCAGTGATCAAAGCTGGTGTTTTCTGTTACAGATGTGGGGAAGATGGGCATCTGAAGCGTGATTGTAACAATGAAGAAAATCTCAGGAAAGTAAACCAGCGACTCATCAGAATGAGACAGTCATCGGGAAACTTCTCCGGGGCTCAGTAG

Function

NR:

description
paraneoplastic antigen Ma1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264321.1 True 1401 mRNA 0.45 1 19624212 19625612

Neighbor

gene id symbol gene type direction distance location
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding upstream 20394 19600012 ~ 19603818 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding upstream 173001 19404321 ~ 19451211 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding upstream 235549 19380035 ~ 19388663 (+)
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding upstream 965472 18654618 ~ 18658740 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 1077905 18544363 ~ 18546307 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding downstream 259522 19885134 ~ 19901478 (+)
LOC122323160 LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982 coding downstream 277534 19903146 ~ 19908222 (+)
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding downstream 302614 19928226 ~ 19935759 (+)
LOC122362767 LOC107561062 coding downstream 312416 19938028 ~ 19940813 (+)
LOC122323149 LOC107561063,LOC107705779,LOC107686622,LOC107561062 coding downstream 319534 19945146 ~ 19954199 (+)
G127630 NA non-coding upstream 930 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 48053 19575889 ~ 19576159 (+)
LOC122323166 NA non-coding upstream 55727 19487570 ~ 19568485 (+)
LOC122323165 NA non-coding upstream 143991 19452530 ~ 19480221 (+)
LOC122362700 NA non-coding upstream 275733 19330322 ~ 19348479 (+)
G127632 NA non-coding downstream 541 19626153 ~ 19626521 (+)
G127637 golim4,LOC107662907 non-coding downstream 156153 19781765 ~ 19924802 (+)
G127663 NA non-coding downstream 360129 19985741 ~ 19991636 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 577136 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 595692 20221304 ~ 20224584 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 335656 19269611 ~ 19288556 (+)
G127500 NA other upstream 782677 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 972048 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 1061060 18559963 ~ 18563152 (+)
G127292 NA other upstream 1483959 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 377392 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 442066 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 920380 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 925536 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 964072 20589684 ~ 20600519 (+)

Expression


Co-expression Network