ulk3 (ulk3,LOC107665498,LOC107681021,LOC107595383)


Basic Information

Item Value
gene id ulk3
gene name ulk3,LOC107665498,LOC107681021,LOC107595383
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16819287 ~ 16829354 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264457.1
GCGTGACGTCACCGCGCAGAAGTAAACAGACCGCCGGGCTTCATCCGTAAACACGCTCGCGAAATGTTTACGATGGCGCGTTAAATATCACGCGGCTGTCGTTCGTGGAGGCCAGCGGCGGAGCTCTCGATCGTGCTGTAAATGCCACCGATTATCGATTACCGATTGACTGATTGATGTCAGGTCGGGATGGCCGCGGGTTTCGCTCCCCCGAAGCTCAAAGACTTCATTCTGACCGAGAAACTGGGAAGCGGCACTTACGCGACCGTTTACAAAGCTTTCAGAAAGGCGGACGGCAGGGAGGCGGTGGCCGTGAAGGTGGTCAGTAAGAAAAGCCTCAATAAAACCTCGATGGAGAACCTGCTGACTGAGATCGAGATCCTCAAAACAGTCCGGCATCCTCACATAGTGCAGCTCAAAGACTTCCAGTGGGACAGCGAGAACATCTATCTGATTCTGGAGTGGTGTTCAGGAGGAGATTTGTCCCGATTTATCCGAAGTCGCCGGATCCTTCCGGAGAGAGTCGCCCGTCGCTGCCTACAGCAGatcgCATGCGCTCTTCAGTTCCTCCATGAGAAGAACATCTCTCATCTGGACCTCAAGCCACAGAACATTCTGCTGAGTGGAAACGTGCTGAAGCTCGCAGacttCGGTTTCGCGCAGTACATGAGTCCGTGGGACGAGCAGCAGGCTCTGAGAGGTTCTCCGCTCTACATGGCTCCTGAGATGGTCTGCAGACGGCATTACGACGCTCGGGTGGACCTGTGGTCCGTCGGGGTCATTCTATACGAAGCATTATTCGGACGAGCTCCCTTTGCCTCTCGCTCCTTTGCTGAACTAGAAGAGAAGATCCGCAGCGAGAAACCCATCGAGCTTCCGTCCGGAGCCAGAGTTTCTCGTGACTGCCGAGATCTGCTGCTGCGTCTGCTGGAGCGAGACCCGGACGGACGCGTCACGTTCCATGAGTTCTTCCTGCATCCCTTCGTGGATCTGGAGCACATGCCCAGCGCCGAGAGCCTCGGGAAGGCTAAAGCGCTGGTGTTGCAGGCGGTGAGGAAGGACCAGGATGGAGAGAGATCGGCGGCGTTATCTCTCTACTGTAGTGCACTCGAACACTTCGTTCCTGCCATTCACTATGAGACGGACACACAGAGGAAGGAAGCCCTGAGACAGAAGGTGAATCAGTATGTTTCTCGTGCCGAGGAGCTTAAAGCGCTGGTCAGATCGGACAACAAGATCAGTTTTGAGGAGGCAAAATCAACCAGGAACATATTAATAGAAATGTCTAGAGATCAACCACGCTTACTGGCGGCGCTGGAAGTGGCTTCCACTGCTGTTGCCCAGGAGGAGAGCGGCGCCGAGGACTATGACACGCTCGATCTGTACCAGCAGTGTCTGGGAGAGCTGCTGCTGGCGCTGGCGGcTGAATCTCAGGGCCGGCGCAGGGAGCTGCTCCACAGCGAGattaaaagtctgatgagTCGAGCTGAATACCTCAAAGAGCTGATGAAGATGCGGGAAACTCAGACGGACGACTCTCTGAAGAAAGACGCCGCTGCTGAGTCTGTGAGATCCTcctgcTGTTTACAGTGAGCTTGGGGTTCTCGCCATGGCAACGGGATGCTGCGCTCctggcagacacacacactcgctctcgcTGAACCGTCTGATCTGGTTTGTGTTCGTCTTGGCCAGATCTGAAATCTCTCACCTTCACACCTGAAGGAGAAGAGTCCTGACTGTAAAAATCACTgctgaggacacacacacacacacacacacacacacacacacacacaggctgacCGCAGCTCTACCGCAGATCCAGCAGCATGAGAGAGGTGTGGCTTTCTGTGTGTTTACTCtgggctcacacacacacacacacacacacacacacacacaaagggaGTTTTAGCGTTGTGTCAGACGAGCTGTGATTGCTGATGATTGTGGGGTTATTTATTCACTGAACTGAATGAAAGCATCAtctgtatttctctctctctctctctccgagtGAATATTTTCTTGCGTTATGAATTTCTGTTGGCCATAAATTGTCATTTCCTCTCTGCATTCCTCCGGTAATATAATTCCTCCCCTGCATTCCTCTTTCCTCTCTGGAATAAATCAGCCTGCAGAAACCATCATCATATTCACTCGAAACATCAACAGCTCTTTACTTCACGGGATCCCTTCATCAAGCTCCTTTACTTTCAGCAATTATTACAATCAAAAGTTATATCTGTGAATATTTAATAGACTCGAGCTGAcggttgtatttttataaacggACGTTATCAAGCAGGAAACATGCGTATGCGTTTGTTTTACACTCAGTTCACTGAAATGACTGATGAGCGCTGAAACATGGTGGTCTTCCTCAGGATTTCGTCtggtttttaaacaaaaatgaatgcaaacgaagtgtgttttctgaaaaaacgatcaaaataaaatgagcgTTTGgtaaaacaagaacaaacatCTGCTGATGGGTTCAGAAAAATCAACTTCATTCAGTTTCATTTTCCACTGACAGATACTCGTTCTTGTTTTAGTCGTAAACGTGATTGTGTTCGATTTCCCCGAAA

Function

symbol description
ulk3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in autophagosome organization; peptidyl-serine phosphorylation; and protein autophosphorylation. Predicted to act upstream of or within autophagy and protein phosphorylation. Predicted to be active in autophagosome. Orthologous to human ULK3 (unc-51 like kinase 3).

NR:

description
PREDICTED: serine/threonine-protein kinase ULK3

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K21358 ULK3; serine/threonine-protein kinase ULK3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264457.1 True 2597 mRNA 0.50 16 16819287 16829354

Neighbor

gene id symbol gene type direction distance location
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding upstream 29614 16780682 ~ 16789673 (+)
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding upstream 101129 16705581 ~ 16718158 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding upstream 141221 16618170 ~ 16678066 (+)
secisbp2l secisbp2l,LOC107573840,LOC107740797,LOC107713195,LOC106587693,LOC107698883 coding upstream 209161 16592589 ~ 16610126 (+)
LOC122323202 nnt2,LOC108412674 coding upstream 268570 16536459 ~ 16550717 (+)
LOC122363001 NA coding downstream 129470 16958824 ~ 16971364 (+)
LOC122362752 LOC107665215,LOC107595393 coding downstream 237740 17067094 ~ 17069819 (+)
LOC122362967 NA coding downstream 249705 17079059 ~ 17099562 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 496612 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 595800 17425154 ~ 17425977 (+)
G126826 NA non-coding upstream 15794 16802772 ~ 16803493 (+)
LOC122362527 NA non-coding upstream 79917 16736723 ~ 16739370 (+)
G126815 slc24a5 non-coding upstream 95813 16723216 ~ 16723474 (+)
G126813 slc24a5 non-coding upstream 99157 16719496 ~ 16720130 (+)
G126792 NA non-coding upstream 145981 16672536 ~ 16673306 (+)
G126797 NA non-coding downstream 5935 16835289 ~ 16873985 (+)
G126854 NA non-coding downstream 107747 16937101 ~ 16937486 (+)
G126856 NA non-coding downstream 113465 16942819 ~ 16943240 (+)
G126858 NA non-coding downstream 115009 16944363 ~ 16944728 (+)
G126859 NA non-coding downstream 115938 16945292 ~ 16946656 (+)
G126820 NA other upstream 888 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 548020 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 763660 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 865634 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1771394 15035383 ~ 15047893 (+)
G126884 ctxn2 other downstream 244840 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 300568 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 474415 17303769 ~ 17309158 (+)
G127098 NA other downstream 581331 17410685 ~ 17411593 (+)
serp1 NA other downstream 624800 17454154 ~ 17455657 (+)

Expression


Co-expression Network