CI01000001_04328211_04330988


Basic Information

Item Value
gene id CI01000001_04328211_04330988
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4327576 ~ 4331052 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04328211_04330988.mRNA
GCATAAAAAACTTGTTTCATAAGAGGGATCAGGACAGCAGATGAAAATACAATGAATAAAACTATTGTTCTCTGTGAGACGTTTTAACTCTCTTCACAGGGGAGTCTTCAGTTGTCTTTTCAAGGCCACAACATCTGATGAAGACCATGAGGAATCTGGAAAACATGTCTCTTTCTTTCCACTGTGATGCAATGCACACTGAAACGATTTCATTTCCTGTTCTCCATAACGCTCCCAAGTCAAGCGTCATCTCAGCTCAACTCTGAACATTCCAGTCTATTATAATTATATAACTGTTTGTTTCTCTATATATTGGCATTAGATTTATTATTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTAATTAAGTTGTTTATGTTTTAAAATGTTTAATGCTATAAAATGTTTGATAATCCATCTTGGCTTTAACAAAAAAATCTCTGGAGGCATACTAGGCATTAAAAGATATTAAAATCAAAATATGTTAAGACCAACTTGGACACAAGTCTAAATTTCTTCTCATGTTGTGTACAGGACCCAGCATAGTGTAAAATCATGACACTTGCGTCATGGATAAAGAATGTTAACTGATCCATGTGATGTTTTTCTTGGACAAATGTCGCCCCCTGGTGTAATAATGATGACTATACGCTTCGCGAAACATGTCAATACGGCTCTGCGACATGTGATTCGCTCGAGTGTTTGTAAACATGCGTCAAAAGCATGTGATTCTGCTGACGACAAACTGCGTTCTAGAAGGACGGCCAATCAGAAAACGGGGGTGTGTGAGCTGGGCGGGGCCTCGCTGTATCGCTGTGGAACATTCTATGTGCTCGGCAACAAGACGCTTCTGATTGAAAAATGCAGTTCAAGCCAAAATCATCCATCGTTTGACATCTCTAAGAGACAGAATAACTCGACGACACGTTTGTTCAGTGATTTTGGGATGAAGAGCGACTGCAACACTTTAAAGTGGCAATCTGCCATTTCATCCATCCAAGCCAAACAAGCACAATAAGGTTAGCCATATCACCGTTTCCCTCCAACAAATTTAAATAATGTGAATTCACCCTTACCGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04328211_04330988.mRNA True 1101 mRNA 0.39 4 4327576 4331052

Neighbor

gene id symbol gene type direction distance location
CI01000001_04311013_04315588 NA coding upstream 11811 4311013 ~ 4315765 (+)
CI01000001_04296723_04300348 NA coding upstream 26601 4296601 ~ 4300975 (+)
CI01000001_04085864_04225894 PLXNA2 coding upstream 101682 4085864 ~ 4225894 (+)
CI01000001_03983212_04011240 NA coding upstream 315980 3983128 ~ 4011596 (+)
CI01000001_03867875_03890850 NA coding upstream 436587 3867840 ~ 3890989 (+)
CI01000001_04369131_04373697 SNPHB, SNPH coding downstream 38079 4369131 ~ 4373972 (+)
CI01000001_04422037_04431229 NA coding downstream 90985 4422037 ~ 4432602 (+)
CI01000001_04433559_04437385 NA coding downstream 102507 4433559 ~ 4437450 (+)
CI01000001_04462781_04463560 NA coding downstream 131729 4462781 ~ 4464613 (+)
CI01000001_04543164_04553053 COMMD7 coding downstream 211566 4542618 ~ 4553673 (+)
G15288 NA non-coding upstream 53591 4240551 ~ 4273985 (+)
G15287 NA non-coding upstream 194052 4100122 ~ 4133524 (+)
G15313 NA non-coding upstream 218216 4103809 ~ 4109360 (+)
G15298 NA non-coding upstream 286823 4040302 ~ 4040753 (+)
G15245 NA non-coding upstream 345922 3981451 ~ 3981654 (+)
G15338 NA non-coding downstream 12836 4343888 ~ 4348581 (+)
G15360 NA non-coding downstream 25164 4356216 ~ 4356616 (+)
G15370 NA non-coding downstream 150786 4481838 ~ 4486799 (+)
G15371 NA non-coding downstream 155868 4486920 ~ 4491381 (+)
CI01000001_03618075_03620436 NA other upstream 706125 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2656572 1667762 ~ 1671167 (+)
G13051 NA other upstream 3282424 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3835519 483853 ~ 488825 (+)
G12614 NA other upstream 4016635 309144 ~ 310941 (+)
G15794 NA other downstream 730166 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 955697 5279837 ~ 5287698 (+)
G15995 NA other downstream 1380833 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3201520 7531541 ~ 7540586 (+)
G17234 NA other downstream 3701072 8032124 ~ 8032483 (+)

Expression


Co-expression Network