CI01000001_04433559_04437385


Basic Information

Item Value
gene id CI01000001_04433559_04437385
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4433559 ~ 4437450 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04433559_04437385.mRNA
ATGGGTCAGTCAGTGAGCGGGCACATTCATGTTGCTTCGAGGCAACGCAGATCAGACAAATGCACAGCTCTGCAGTCAGATGTTCCAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTACTGAACCTGCCTGCACATCAGGTGGTGCGAGTCTGTCGGCTGGTGTGTCGTGAGTGGAAGGAGCTGGTGGACAGTGCTTCACACTGGAGAGAGCGCTGTCGGAGAGAGGGGATCCAGCCCTGTGATGCTTCCAGAACCCCAGAGGACTGGCGTCTGTTTTACTTTCTTACTAAGAAACAACGTAACTTGCTAAAGAATCCCAGAGCTGATGACCCTTCAAGAAAGTTCTATCAATCATGTAGCCAATCCACACATGAATCACCCATAAACTTTGTCCTCAGGTTATGTTTGAAGCGACAGCTGATTGACTTGAAGAAAGAAGGTTATAGTGCTGCTTTCATGGATCAACTGCAACCTCATATCAAAATATCAGACTGGTATGCACCACGCTTTGATTGTGGGTGTCAGTATGAGGTCTGTGTAGAGTTGCTTGATCAGAGGAAAAACGCCATCAGAACCTTTCAGCCTGAAAAAGTTCTATTTGAACAGTGGAACGATGAGCCGTGGTGTCAAATGACACATGTATTTAAGGATTATGGACGTGGGGTTCGGTTTATTCGTTTCACTAATGGAGGGGTGGATACACAGTTCTGGGCAGGCTGGTATGGAATACGACTCACTAACAGTAGTGTGGAGATCTGTCCATCTGTCCAGAGATAGTATTTTCCTGCATGATTTTTTTTACATTCCTAAATTTACCAGGCACTATATTACAAATCTCTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04433559_04437385.mRNA True 845 mRNA 0.46 5 4433559 4437450

Neighbor

gene id symbol gene type direction distance location
CI01000001_04422037_04431229 NA coding upstream 1427 4422037 ~ 4432602 (+)
CI01000001_04369131_04373697 SNPHB, SNPH coding upstream 59587 4369131 ~ 4373972 (+)
CI01000001_04328211_04330988 NA coding upstream 102507 4327576 ~ 4331052 (+)
CI01000001_04311013_04315588 NA coding upstream 117794 4311013 ~ 4315765 (+)
CI01000001_04296723_04300348 NA coding upstream 132584 4296601 ~ 4300975 (+)
CI01000001_04462781_04463560 NA coding downstream 25331 4462781 ~ 4464613 (+)
CI01000001_04543164_04553053 COMMD7 coding downstream 105168 4542618 ~ 4553673 (+)
CI01000001_04567822_04568927 NA coding downstream 130014 4567464 ~ 4569260 (+)
CI01000001_04586080_04595939 NA coding downstream 148446 4585896 ~ 4596418 (+)
CI01000001_04624476_04679572 NOL4LB coding downstream 187026 4624476 ~ 4679829 (+)
G15360 NA non-coding upstream 76943 4356216 ~ 4356616 (+)
G15338 NA non-coding upstream 84978 4343888 ~ 4348581 (+)
G15288 NA non-coding upstream 159574 4240551 ~ 4273985 (+)
G15287 NA non-coding upstream 300035 4100122 ~ 4133524 (+)
G15370 NA non-coding downstream 44388 4481838 ~ 4486799 (+)
G15371 NA non-coding downstream 49470 4486920 ~ 4491381 (+)
G15404 NA non-coding downstream 128820 4566270 ~ 4566542 (+)
G15389 NA non-coding downstream 161227 4598677 ~ 4726740 (+)
CI01000001_04723418_04724292 NA non-coding downstream 283225 4723354 ~ 4725671 (+)
CI01000001_03618075_03620436 NA other upstream 812108 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2762555 1667762 ~ 1671167 (+)
G13051 NA other upstream 3388407 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3941502 483853 ~ 488825 (+)
G12614 NA other upstream 4122618 309144 ~ 310941 (+)
G15794 NA other downstream 623768 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 849299 5279837 ~ 5287698 (+)
G15995 NA other downstream 1274435 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3095122 7531541 ~ 7540586 (+)
G17234 NA other downstream 3594674 8032124 ~ 8032483 (+)

Expression


Co-expression Network