thsd7aa


Basic Information

Item Value
gene id thsd7aa
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 1017155 ~ 1052124 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191502
gagcgagagagaggaggggggaaTGGGAGGTGCTGTATCAGCCAGGCTGAGCCAGGACGCAGTAGCCGCACAAGCAGCGCGCTGAGCTGAGGGATCTATTGTTCCtctggcttttttatttttttctcctccactCAGACCTCATTCTTCTCCACTGACCCAGAGAacacagagaagaagaaataaaaggaGGGAAAATAGAGGAGTTAGTGGAGAAAGACACAGACAAGTGGATTACCCTTTCCTGGAGGAACCGCGTACAGAAGAGTGAGAGGGACAATAGCAGGCACACTTTCCCCTGTGCCGCATCTTCTCGTGCATACATctcctgctgtgtgtgtatCGTGCGGGTCTGTTTGGCCAGACTTGAGCCGCGTGGATTTATCTGGCCGGGCTAAAGCCATGGGGCTGGCCAGCAGGGCAGCAGGAGGAAGGGGCACTTCAGCAGGGTCTCTTGCCACCCTCTTCAGAGTAGCTCTGCTCTTTTTTGGGCTTTGGGATGTCCAGACTCAAACAGTCGCCAGCACAAAACCCACCTACATCTGGCAAACagg
>XM_043217895.1
CAGAGAGTGATTGCAGGTGGATGCTGGATTAGTAAAGGAGAGCGAGACAGTTTGAGTGAgcgcgagcgagagagaggaggggggaaTGGGAGGTGCTGTATCAGCCAGGCTGAGCCAGGACGCAGTAGCCGCACAAGCAGCGCGCTGAGCTGAGGGATCTATTGTTCCtctggcttttttatttttttctcctccactCAGACCTCATTCTTCTCCACTGACCCAGAGAacacagagaagaagaaataaaaggaGGGAAAATAGAGGAGTTAGTGGAGAAAGACACAGACAAGTGGATTACCCTTTCCTGGAGGAACCGCGTACAGAAGAGTGAGAGGGACAATAGCAGGCACACTTTCCCCTGTGCCGCATCTTCTCGTGCATACATctcctgctgtgtgtgtatCGTGCGGGTCTGTTTGGCCAGACTTGAGCCGCGTGGATTTATCTGGCCGGGCTAAAGCCATGGGGCTGGCCAGCAGGGCAGCAGGAGGAAGGGGCACTTCAGCAGGGTCTCTTGCCACCCTCTTCAGAGTAGCTCTGCTCTTTTTTGGGCTTTGGGATGTCCAGACTCAAACAGTCGCCAGCACAAAACCCACCTACATCTGGCAAACagGGCCATGGGAGTAGGTGCCATGGAGCAGTGAGTGTGGTCCGGGAGGAAGTCAAAGCCGAGCGGTATGGTGTGCCTGCCCATTCTGAGGGGCTGGACCACGCATAATTACCAACCAAGCCAGCAGTCGGCGGCCCAACAACCAATAGAGAGCTACTTCGGGTGTGCGATTGGCTGGGAGGCTGTCTGACTAGCAGCTAGGGGCCTGGAACCAGTACGTGCCGGTGTCTGTCTGTAGTCTAGTAGTGCCAAGAATGGCCGTGTGCACTCGAGGCGAAAGAAGAACATCAGGCAGGAAGTAGGCTTATGTGCATAAATCAGATGGCGTTCCTGCAGAAGATGCCATCATAGCCAGATACTTTGAGCCCAAACCACGCAGTTTAGAGCAGGCCTGTCTTATCCCATGCCCACGTGACTGCGTGGTGTCGGGTCCCCCATGGACATCCTGCTCTAAGGATTGCTGAGTGGGCCTGCAGAACCGTCTACCCCGATGGGTTCTAATCACTTTCTTTGATGGCTCAGCTTCTAACCTAACAGGTTCACGCACCTGCCAGCCTGGCCCCTGCCAAGCCTGAGAGAGCACCCACAACGAGGTGGGACCTTGGGGCCTGGCAGCCGCCTATCCCACGATGGCCGGGAAGTGAGAGCCCAAACAGAAGCAGAGCCCAAACTGAGCGAGGAAAGTAAAGAGGGAAGCGGCTTGGGCCAGGCAGGAACGCCAGGGCAAGCGTCGcaagaacaaagagaaaaaaggtgAAGGAAAACAAAGGAAGACGATGAAGGATAGGGTCAGGGTGAAGGAAGGATGA

Function

NR:

description
thrombospondin type-1 domain-containing protein 7A-like isoform X1

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0043534 blood vessel endothelial cell migration biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191502 False 554 lncRNA 0.54 1 1051508 1052061
XM_043217895.1 True 1422 mRNA 0.55 8 1017155 1052124

Neighbor

gene id symbol gene type direction distance location
LOC122323800 thsd7aa,LOC107670038,LOC107722152,LOC107698991,LOC108410784 coding downstream 23507 959443 ~ 993648 (-)
nxph1 nxph1,LOC107670023,LOC107566937,LOC107555956,LOC107712631,LOC107722163,LOC108410782,LOC108272426,LOC107698976 coding downstream 61367 922886 ~ 955788 (-)
phf14 phf14,LOC107722156,LOC107670007,LOC107712766,LOC107698992 coding downstream 206273 737022 ~ 810882 (-)
col9a2 col9a2,LOC107722164,LOC107669993,LOC107698977,LOC107712764 coding downstream 311482 688221 ~ 705673 (-)
LOC122323802 LOC107664710 coding upstream 42866 1094990 ~ 1112229 (-)
dlgap3 dlgap3,LOC107664711,LOC107563279,LOC107698989,LOC107712634,LOC107722119 coding upstream 64847 1116971 ~ 1248823 (-)
LOC122323396 NA coding upstream 450171 1502295 ~ 1503733 (-)
LOC122323557 LOC107717726,LOC107700649,LOC107565231,LOC107670692,LOC107563213,LOC107719860 coding upstream 568977 1621101 ~ 1626642 (-)
LOC122323559 LOC107700650,LOC107719859,LOC107563207,LOC107717718,LOC107565241 coding upstream 593444 1645568 ~ 1657024 (-)
LOC122324168 NA non-coding downstream 122257 863289 ~ 894898 (-)
G129635 NA non-coding downstream 294844 719320 ~ 722311 (-)
G129618 adgrb2,LOC107722142,LOC107669951,LOC107712761 non-coding downstream 479352 521875 ~ 537803 (-)
G129714 cx39.4,LOC107563282,LOC107664709,LOC107726142,LOC107712627,LOC107698984,LOC107555947 non-coding upstream 204421 1256545 ~ 1258314 (-)
G129717 NA non-coding upstream 220100 1272224 ~ 1272429 (-)
G129728 NA non-coding upstream 240507 1292631 ~ 1293279 (-)
G129731 NA non-coding upstream 260062 1312186 ~ 1313269 (-)
G129737 NA non-coding upstream 445938 1498062 ~ 1498636 (-)
LOC122323272 NA other upstream 20027 1072151 ~ 1094903 (-)
smim12 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 226788 1278912 ~ 1280509 (-)
pef1 pef1,LOC107664714,LOC107726139,LOC107698987,LOC107712637 other upstream 229415 1281539 ~ 1287206 (-)
G129738 NA other upstream 446564 1498688 ~ 1499406 (-)
LOC122323398 pkib,LOC107098269 other upstream 1687880 2740004 ~ 2751570 (-)

Expression


Co-expression Network