G129737


Basic Information

Item Value
gene id G129737
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 1498062 ~ 1498636 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191588
CTGAAAGTCACTGCTAGAACTTCACACTGTGTTCGCCTAGCTGGCAAAGGTGACACCTGGTATCACTTGTCTTCATGTGCAGCCTGTGACCCACCTGAGAGATCACTGAAAGATACCAGATTGGCCCTGACAAGTCAGGACCAAGAGAGGGATATTGATACTggtaacacaaaaacattgcacACACCAACAGcagaatttctttacttctaagattgataccatcagagataaaattgtaactatgcagccgtcaactacagtttcacatcagataatgagctttagatcccctaaggaaaaattacactctttctctattataggagaagaagacttgtacaaacttgttaaatcatctaaaccagcaacatgtatgttagaccctattccatctaaactattaaaagatctgcttccagaagtcatagatcctattttgaacattattaattcatcattgtcattaggttatcttcccaaaacctttaaactggctgtagttaaacctctcattaagaaaccacatcttgatcccaaagacttagtaaattacagaccaatctctaatctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191588 True 575 lncRNA 0.38 1 1498062 1498636

Neighbor

gene id symbol gene type direction distance location
dlgap3 dlgap3,LOC107664711,LOC107563279,LOC107698989,LOC107712634,LOC107722119 coding downstream 249239 1116971 ~ 1248823 (-)
LOC122323802 LOC107664710 coding downstream 385833 1094990 ~ 1112229 (-)
LOC122323800 thsd7aa,LOC107670038,LOC107722152,LOC107698991,LOC108410784 coding downstream 504414 959443 ~ 993648 (-)
nxph1 nxph1,LOC107670023,LOC107566937,LOC107555956,LOC107712631,LOC107722163,LOC108410782,LOC108272426,LOC107698976 coding downstream 542274 922886 ~ 955788 (-)
phf14 phf14,LOC107722156,LOC107670007,LOC107712766,LOC107698992 coding downstream 687180 737022 ~ 810882 (-)
LOC122323396 NA coding upstream 3659 1502295 ~ 1503733 (-)
LOC122323557 LOC107717726,LOC107700649,LOC107565231,LOC107670692,LOC107563213,LOC107719860 coding upstream 122465 1621101 ~ 1626642 (-)
LOC122323559 LOC107700650,LOC107719859,LOC107563207,LOC107717718,LOC107565241 coding upstream 146932 1645568 ~ 1657024 (-)
LOC122324230 rarb,LOC107700643,LOC107719850,LOC107717720,LOC107563215,LOC107565243,LOC107103632 coding upstream 206360 1704996 ~ 1863997 (-)
nr1d2b nr1d2b,LOC107565234,LOC107700655,LOC107719847,LOC107569910,LOC107743928 coding upstream 472131 1970767 ~ 1978340 (-)
G129731 NA non-coding downstream 184793 1312186 ~ 1313269 (-)
G129728 NA non-coding downstream 204783 1292631 ~ 1293279 (-)
G129717 NA non-coding downstream 225633 1272224 ~ 1272429 (-)
G129714 cx39.4,LOC107563282,LOC107664709,LOC107726142,LOC107712627,LOC107698984,LOC107555947 non-coding downstream 239748 1256545 ~ 1258314 (-)
LOC122324168 NA non-coding downstream 603164 863289 ~ 894898 (-)
G129741 NA non-coding upstream 32284 1530920 ~ 1531330 (-)
G129750 NA non-coding upstream 85435 1584071 ~ 1585419 (-)
G129770 LOC107700642,LOC107717719,LOC107565238,LOC107563205 non-coding upstream 109467 1608103 ~ 1612239 (-)
G129772 LOC107565238,LOC107717719,LOC107563205,LOC107700642 non-coding upstream 115305 1613941 ~ 1614965 (-)
G129793 NA non-coding upstream 170988 1669624 ~ 1672776 (-)
pef1 pef1,LOC107664714,LOC107726139,LOC107698987,LOC107712637 other downstream 210856 1281539 ~ 1287206 (-)
smim12 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other downstream 217553 1278912 ~ 1280509 (-)
LOC122323272 NA other downstream 403159 1072151 ~ 1094903 (-)
thsd7aa NA other downstream 445938 1017155 ~ 1052124 (-)
G129738 NA other upstream 52 1498688 ~ 1499406 (-)
LOC122323398 pkib,LOC107098269 other upstream 1241368 2740004 ~ 2751570 (-)
G130000 NA other upstream 1326708 2825344 ~ 2832956 (-)
G130041 LOC107687396,LOC107708727,LOC107595896 other upstream 1409853 2908489 ~ 2911603 (-)
G130083 LOC103461248,LOC102786159 other upstream 1650518 3149154 ~ 3149789 (-)

Expression


Co-expression Network