G129979


Basic Information

Item Value
gene id G129979
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2754024 ~ 2785827 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191899
CACCTGAGGAGGACAATGTGTCTGAGATGGACATTGCGTCTGAGGAGGACATTGTGTCTGAGGAGGGCAGTGTGTCTGAGATGGACATTGCGTCTGAGGAGGGCAGTGTGTCTGAGATGGACATTGCGTCTGAGGAAGACAGTGCACCTGAGATGGACATTGCTTCTGAGGAGGACATTGCGTCTGAGGAGGGCAGTCTGTCTGAGATGGACATTGCgtctgaggaggacagtgtgtCTGAGATGGACAGTGCGTCTGATGAGGAAAGTGCCCCTGAGACCATCTTTGTCCCTGAGACAGACAGTGCatctgaggaggac

Function

NR:

description
PREDICTED: ras-related protein Rap-1A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191899 True 320 lncRNA 0.54 2 2754024 2785827

Neighbor

gene id symbol gene type direction distance location
ptprua ptprua,LOC107732911,LOC108272369 coding upstream 189468 2380621 ~ 2564556 (+)
gmeb1 gmeb1,LOC107556889,LOC107595901,LOC107708700 coding upstream 412901 2331733 ~ 2341123 (+)
LOC122324256 NA coding upstream 423748 2330141 ~ 2330276 (+)
rab42a rab42a,LOC108414691,LOC103028730,LOC107732921,LOC107689573,LOC107708721,LOC107595911,LOC107556890,LOC107675932 coding upstream 426143 2322401 ~ 2327881 (+)
ctps1a ctps1a,ctps1,LOC107708718,LOC107689550,LOC108415321 coding upstream 435991 2311270 ~ 2318033 (+)
hivep3a hivep3a,LOC107708727,LOC107687396,LOC107689544,LOC107732924,LOC107595896,LOC107569862,LOC107732908 coding downstream 108717 2894544 ~ 2914709 (+)
edn2 NA coding downstream 133541 2919368 ~ 2922019 (+)
LOC122323611 NA coding downstream 364250 3150077 ~ 3163642 (+)
tbxta ta,LOC107700831,LOC107689566,LOC108411273,LOC104926085 coding downstream 700675 3486502 ~ 3491224 (+)
nr0b2b NA coding downstream 718282 3504109 ~ 3508711 (+)
G129974 NA non-coding upstream 19841 2728465 ~ 2734183 (+)
G129947 NA non-coding upstream 374669 2379083 ~ 2379355 (+)
G129942 NA non-coding upstream 402459 2351298 ~ 2351565 (+)
G129936 NA non-coding upstream 410785 2343035 ~ 2343239 (+)
G129916 NA non-coding upstream 488589 2265217 ~ 2265435 (+)
G130015 NA non-coding downstream 130118 2915945 ~ 2916411 (+)
G130017 NA non-coding downstream 136338 2922165 ~ 2922620 (+)
G130020 NA non-coding downstream 141461 2927288 ~ 2927504 (+)
G130022 NA non-coding downstream 144600 2930427 ~ 2934447 (+)
LOC122323349 NA non-coding downstream 200715 2986542 ~ 3045884 (+)
ppp1r8a ppp1r8a,LOC107690919,LOC107732917,LOC107708698,LOC108441741,LOC108272406,LOC105903676 other upstream 612692 2134652 ~ 2141332 (+)
LOC122323678 NA other upstream 780640 1966740 ~ 1973384 (+)
thrb thrb,LOC107743925,LOC107719848,LOC107700654,LOC106588669 other upstream 788334 1870158 ~ 1965690 (+)
LOC122323556 LOC107717722,LOC107700644,LOC107565248 other upstream 1081240 1657258 ~ 1672784 (+)
G129682 LOC107664710 other upstream 1647451 1072151 ~ 1106573 (+)
G129993 NA other downstream 98 2785925 ~ 2786348 (+)
LOC122323290 NA other downstream 99586 2885413 ~ 2887628 (+)
serinc2 serinc2,LOC107732928,LOC107689546,LOC107687316,LOC107708726,LOC108272915,LOC103358775 other downstream 103796 2889623 ~ 2893601 (+)
phactr4a phactr4a,LOC107550657,LOC107687470,LOC107595895,LOC107689543 other downstream 173766 2959593 ~ 2978416 (+)
G130077 NA other downstream 307240 3093067 ~ 3093714 (+)

Expression


Co-expression Network