G129998


Basic Information

Item Value
gene id G129998
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2787203 ~ 2803604 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191923
CGATGGACGAAATCactaactttaaataaacattttactcaAAATCCACGTgggacatttatttttatcataACCATAataaccaaaacacacacacacacacatacactcacacacacacaaaatttacGAAACAGATCACATGAAGTGTCTTTGAAGTGTCTGccattgtgcagttttttttccaatcaTTGCATTTAAACCTTTTTGGCCATTAAAGAAAAAGATGCTCAGAGACAAACTGCTACTGTGGACCTCTCTGCAGCAAGAATTATCTTCCTTTAAGAGAAATACAGAACATGTAGAAAGAAATGTAGAActgacaaatgtatttatgtatgctttttttattccacCAAATAAAGGATAGGTTAGGTTCTTGAAGTTAAAAGGGGCTCAGGGATTGTGGGTCTCAGAGACGGTGGACAGTGGAAGCTTTAGAGGTCGAGTCAGACTCTGAGGTGGTGTCTG

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU191923 True 471 lncRNA 0.37 2 2787203 2803604

Neighbor

gene id symbol gene type direction distance location
stmn1a LOC103471979,LOC105933928,LOC102781761,LOC107098265,LOC104924882,LOC103142368,LOC100709328 coding downstream 51073 2733736 ~ 2736130 (-)
cited4a LOC107689549,LOC107556893,LOC107595899,LOC107732920,LOC107675931 coding downstream 528769 2253838 ~ 2258434 (-)
LOC122324005 NA coding downstream 725478 2060114 ~ 2061725 (-)
ube2e1 ube2e1,LOC107655879,LOC107565235,LOC107743927,LOC105903698,LOC107700659 coding downstream 782169 1991179 ~ 2005034 (-)
rpl15 rpl15 coding downstream 800014 1983801 ~ 1987189 (-)
maneal si:ch211-30b16.2,LOC107569868,LOC107686956,LOC107708724,LOC107719841,LOC107693995 coding upstream 73320 2876924 ~ 2884651 (-)
oprd1a oprd1a,LOC107688080,LOC107595906,LOC107732912,LOC107689567,LOC108411271 coding upstream 200388 3003992 ~ 3022358 (-)
arid1ab LOC107712599,LOC107700714,LOC107550655,LOC107737764 coding upstream 580133 3383737 ~ 3437997 (-)
nudc nudc,LOC107689540,LOC107700719,LOC107567584,LOC107550646,LOC107729000 coding upstream 693095 3496699 ~ 3501432 (-)
zgc:175136 LOC107700788 coding upstream 711853 3515457 ~ 3518515 (-)
G129987 NA non-coding downstream 33463 2753416 ~ 2753740 (-)
G129943 NA non-coding downstream 435714 2351278 ~ 2351489 (-)
G129938 NA non-coding downstream 442698 2344252 ~ 2344505 (-)
LOC122324259 NA non-coding downstream 467830 2319236 ~ 2319373 (-)
LOC122324258 NA non-coding downstream 468155 2318972 ~ 2319048 (-)
G130001 NA non-coding upstream 56256 2859860 ~ 2860077 (-)
G130006 si:ch211-30b16.2,LOC107708724,LOC107719841,LOC107693995,LOC107686956,LOC107569868 non-coding upstream 72024 2875628 ~ 2875927 (-)
G130040 LOC101156750,LOC106570256,LOC106588643 non-coding upstream 88035 2891639 ~ 2892473 (-)
LOC122324069 NA non-coding upstream 112858 2916462 ~ 2935657 (-)
G130049 NA non-coding upstream 120405 2924009 ~ 2924386 (-)
LOC122323398 pkib,LOC107098269 other downstream 35633 2740004 ~ 2751570 (-)
G129738 NA other downstream 1287797 1498688 ~ 1499406 (-)
pef1 pef1,LOC107664714,LOC107726139,LOC107698987,LOC107712637 other downstream 1499997 1281539 ~ 1287206 (-)
smim12 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other downstream 1506694 1278912 ~ 1280509 (-)
LOC122323272 NA other downstream 1692300 1072151 ~ 1094903 (-)
G130000 NA other upstream 21740 2825344 ~ 2832956 (-)
G130041 LOC107687396,LOC107708727,LOC107595896 other upstream 104885 2908489 ~ 2911603 (-)
G130083 LOC103461248,LOC102786159 other upstream 345550 3149154 ~ 3149789 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other upstream 509785 3313389 ~ 3323828 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other upstream 559877 3363481 ~ 3379927 (-)

Expression


Co-expression Network