CI01000001_04726550_04727511 (PDPFB, PPDPFB, PPDPF)


Basic Information

Item Value
gene id CI01000001_04726550_04727511
gene name PDPFB, PPDPFB, PPDPF
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4725927 ~ 4728210 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

Function

symbol description
ppdpfb Predicted to act upstream of or within cell differentiation. Is expressed in mucus secreting cell; nervous system; pancreatic system; and pronephric duct. Orthologous to human PPDPF (pancreatic progenitor cell differentiation and proliferation factor).
ppdpf Predicted to be involved in cell differentiation.

GO:

id name namespace
GO:0001708 cell fate specification biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site

Neighbor

gene id symbol gene type direction distance location
CI01000001_04468566_04523431 DNMT3BB.1 coding downstream 202973 4468209 ~ 4523431 (-)
CI01000001_04465168_04466295 CDC42.L, CDC42L2, CDC42P6, CDC42 coding downstream 260109 4463257 ~ 4466918 (-)
CI01000001_04402985_04419845 NA coding downstream 306527 4402780 ~ 4419877 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding downstream 326600 4392314 ~ 4399804 (-)
CI01000001_04378975_04384527 SDCBP2, SDCB1, SDCBP coding downstream 341818 4378885 ~ 4384586 (-)
CI01000001_04732844_04744038 NA coding upstream 4634 4732844 ~ 4744038 (-)
CI01000001_04746153_04754209 NA coding upstream 17923 4746133 ~ 4754209 (-)
CI01000001_04757377_04759421 DNAJC5, DNAJC5.L, DNAJC5AB, DNAJC5AA coding upstream 28209 4756419 ~ 4759507 (-)
CI01000001_04846242_04846925 BHLHE23 coding upstream 117597 4845807 ~ 4847700 (-)
CI01000001_04944573_04950116 TFIP11 coding upstream 216275 4944485 ~ 4950116 (-)
G15646 NA non-coding downstream 22459 4701556 ~ 4703945 (-)
G15704 NA non-coding downstream 92711 4632369 ~ 4633693 (-)
G15703 NA non-coding downstream 94733 4630766 ~ 4631671 (-)
G15638 NA non-coding downstream 158395 4567744 ~ 4568009 (-)
G15729 NA non-coding upstream 64265 4792475 ~ 4794669 (-)
G16367 NA non-coding upstream 185958 4914168 ~ 4925699 (-)
G16371 NA non-coding upstream 198475 4926685 ~ 4926948 (-)
G16373 NA non-coding upstream 203548 4931758 ~ 4931973 (-)
G16375 NA non-coding upstream 231111 4959321 ~ 4960791 (-)
CI01000001_02258523_02262621 NA other downstream 2429192 2258442 ~ 2263103 (-)
G14228 NA other downstream 2669926 2055974 ~ 2056478 (-)
G14219 NA other downstream 2731506 1994210 ~ 1994898 (-)
G15736 NA other upstream 72691 4800901 ~ 4801395 (-)
G16332 NA other upstream 222479 4950689 ~ 4957842 (-)
G16462 NA other upstream 494567 5222777 ~ 5229585 (-)
G16664 NA other upstream 1615894 6344104 ~ 6347955 (-)
G16753 NA other upstream 1856270 6583054 ~ 6615589 (-)
G15537 NA non-coding downstream 107170 4461657 ~ 4461912 (-)
G15544 NA non-coding downstream 107649 4460975 ~ 4461433 (-)
G15546 NA non-coding downstream 110324 4456197 ~ 4458758 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location