G130148


Basic Information

Item Value
gene id G130148
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 3537502 ~ 3540768 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192139
TGGCAGAACGGGACATTTGATGACGATGTGTGAATGAATTAGGAAGATGATGATACGTGTCCATTGGTTTCTGATGACCGTTCTCGTTGACGCAGGTTATGAAGaaatacattcaaaaaaaaaaaaaaaaatcaccataaCTGGCTTCTCGGgagaaaagaacacaaaatacaataaaaagttcAAGAAATCGAACAAAGCACGCGGTCGTCTTTCTTCACATTCCTATATTACAGTTCGGTAAGCTTATTgcattatgaatataaaactaCACGGTCATTCGTTAGGAGTAAAAAAAGGCCTTGAGTGTTTTCACCCTGTTTCTAGTGGTTCATGTGCTCTGCTGAAGGCCTGACGTTATCAGgataaaatcaacaacaaaagcaTTCTGCTACTCATATTTAACTAACGCTCAGCAGCCATTGTAAACAATGCATCTAGTCAAGCAGGCattctcccacacacacacacacactccacaatGCAAGATTGCAAAGACTTCAacctcattttaaaatatgaatttgattATTAGCAGTAAAACCCAGAACAAACAACTTTTGAATGCCAACCACCAGTATTAGACTTTGTGAGcatcagacacactcacacagacttTCAGagccaatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcgcacacacgctAATGCAGCTGCAGGAGGTACGAGGTGAcagcttcattattattaaaaatctgCTTGTTTTTAGTTGTGCAAAGTTCATGTAATGACGAGCTTAAACGGCAGCgcacataaaaaaaacgtttgcaGCACTTTTTTACGCACGGGCAAAACCCACAAAAACGCTAATAAACCTGttgcaaaacaaacaatcaatcaatcaagcGTCCACGTGCgctttttaaaagcactgatGGCGAAAATTATCTAAGAAAAATATAACATCACACGAAAAATGTTACGTTCATTAAGCCATTTACAATCATTCAGTGTTGACTACTTCCATCTCTTCAACTCTGTTAGTTAtgaatttggtttatttttttggagaacaacaaaaaagaaaaaaatggctaaatataaaatgtaaaaaaaaaaaaaaaaacgtacaaaataatgattaaatttCTCAATGTTTACAAATAATCGAGCGTCGACTACAATTGTAAAACTCCATTTGCGGCCCTGctaattatagttatattttaggATTTAGTAAGAAATGatggaaaaaacaaactaaactttacattttacaaatttttttcaAGCCTCGTTTTTGGAAGGTGGCAAGTGAATGTTAACAATAAACACACTGCAACCGCTGAAAGACCTCAGTGAATGAACCACGTTCTGCTTTTAGAGATTACCGAGAGGAAATGGGAACCGCTGGGCTGCCGTGAAGACCTCGACGGTCAAATGTGCTTCTGATCCACTGGTTCACGTCTTTGAAGACAGGAAGGCCGTCAAGTGAGAGCGTCACACTTCACACGGGCTCTCTAATGGGATCAGCTCTAGCCGGGGCCAGCAGGGGCCagtctccacacacacacacacacacacacacacacacaggcccaTCAGAAGACACTCCACCGACACAAAACACACTCGACTACCTGCTGCTCTTGGCAGAACATCCAAAGAGTGAGAGAGCGTGAAAAGAGgaacgaaaagaaaaaaacgtgAGAGGAGAGCAATAGTTAAAAGAGGGGAGTTCGGTGATTTTTCTCTTTGACGTGAAACAAAGAGGGGATTTAATCACGCGGGAGTCATGGAAACGGGTTTGGTGTCCGGATCAGAGTCTAGGATTACGGGTCTGAAGTGCTCGCTTCATGAATACGGCCGGACCTCTGTGCTCTGGGTTACAGTAATAAAGGTTCGACTTTCAGATGTGCGAGTCAAACACTTGCGCACAAAACCACTAGCGAACAAAtagatatgtaaaaaaaataaataaaaacagctcgCGATTAGGacaatgaaaacattcatttttcgTTTCTTTAGttaattacaaatgtttattgtgttactgtaaaaatacagtaagagaGCGCATTTTGAGCCCAGGTTTAATCTTCGTCCTAATTATACACTAATTGAGCAATCTCACGACGCCCCGGATCAgaaggaaaatatattttgcattcaaaaaaatacaaagcctGTTAAAAGTCCCATgacaattaatattatttttttttacattaatgcaagtcctgcagttttttttatactgcaTTAAACACGATCGGTGCTACAAATACTGCAaggatgaataaatacaattaatctaattatatattaatataacgAATAACTAATATTTCATACAGTAGGAAATGTGCTTGCTTTCcacaagcaaaaaataataattaaacaggcttcattttttaatatctaaaacatttctctttttgaCTTTGGGGTGAAATAACGACCTGGAAGTGTTTCCAATCCCTGGATAATATACGGAACACAAATCCTGTtctcagttatttttttatatacgtGATATGATTGTTAAGACTAGGCATATTCTGCCCTTATACCAAGTCAATAGTTCAACGTACCCGTGATATCTCTTGCGAAAGCGAACAACGGAAgcattaaatgcatcatttaaaagTTCGGGAATGAAAGAGCAAAGCTTTCAACATCCATAACCCCTGCGATATAAATCAAGTGTTCCTCAGGACGAGTGTATATTAAAGGCATCATTTGCTCTCCTTCATTCCTAGTCTTCCTGTGCAGGATTTATTAGTGCATGTTAGAAAACTAAATGTCTCTTTCTCCTCTAATGAACTAAAACAGCGGCTAAATTCACCAAGGCCACTTCAATTTCAAGCTTTCACATTCACGTCTGCTTTGTTCTGCTATCGGAACGCATGCTTTTTTTCCTCCGATCAAGCCCTAGCCTACCTTTTGCACTTTTAAATGCGTCACATTCGACTTGAGAAAGCGCTTTCGTAATGGTTAATAAATTAATGCcgtaacaataaattatgcgaTATAATAAGAGCTGGCCGGGCAGCGCAAAGAATGCTTTTCGATACGTAATGCCAACAAGATTAGCTTATTCGTTAGCTAGCGATTTTTGAATGCTAATCTGCTCGTGTAAATAGAGTAGTGTAGAAAAACGATTACACTTTAAAGCATGCCAAGCCACGATATTAAAAGCTGCCAATAAAACGACTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192139 True 3229 lncRNA 0.38 2 3537502 3540768

Neighbor

gene id symbol gene type direction distance location
nr0b2b NA coding upstream 28791 3504109 ~ 3508711 (+)
tbxta ta,LOC107700831,LOC107689566,LOC108411273,LOC104926085 coding upstream 46278 3486502 ~ 3491224 (+)
LOC122323611 NA coding upstream 373860 3150077 ~ 3163642 (+)
edn2 NA coding upstream 615483 2919368 ~ 2922019 (+)
hivep3a hivep3a,LOC107708727,LOC107687396,LOC107689544,LOC107732924,LOC107595896,LOC107569862,LOC107732908 coding upstream 622793 2894544 ~ 2914709 (+)
paqr7a LOC107567589,LOC107754930,LOC107689535 coding downstream 26246 3567014 ~ 3570984 (+)
trnau1apa LOC107754918,LOC107689564,LOC107567591 coding downstream 37210 3577978 ~ 3582390 (+)
stx12 stx12,LOC107700764,LOC107712603,LOC107689533 coding downstream 42326 3583094 ~ 3590653 (+)
ccn2b LOC107550649,LOC107700780,LOC107712605,LOC107578025,LOC107754917,LOC107689532 coding downstream 76373 3617141 ~ 3622533 (+)
epb41a epb41a,epb41,LOC107689531,LOC107569307,LOC107754926 coding downstream 83007 3623775 ~ 3679373 (+)
G130168 NA non-coding upstream 19104 3516460 ~ 3518398 (+)
G130138 NA non-coding upstream 38948 3496699 ~ 3498554 (+)
G130141 NA non-coding upstream 97315 3439713 ~ 3440187 (+)
LOC122324184 NA non-coding upstream 169085 3353019 ~ 3368417 (+)
G130082 LOC103461248,LOC107835431,LOC106945151 non-coding upstream 387731 3149134 ~ 3149771 (+)
G130313 LOC105892072 non-coding downstream 357293 3898061 ~ 4076098 (+)
G130315 NA non-coding downstream 389445 3930213 ~ 3935051 (+)
G130318 NA non-coding downstream 404627 3945395 ~ 3964718 (+)
G130336 NA non-coding downstream 609909 4150677 ~ 4160027 (+)
G130338 NA non-coding downstream 635500 4176268 ~ 4199257 (+)
G130077 NA other upstream 443788 3093067 ~ 3093714 (+)
phactr4a phactr4a,LOC107550657,LOC107687470,LOC107595895,LOC107689543 other upstream 559086 2959593 ~ 2978416 (+)
serinc2 serinc2,LOC107732928,LOC107689546,LOC107687316,LOC107708726,LOC108272915,LOC103358775 other upstream 643901 2889623 ~ 2893601 (+)
LOC122323290 NA other upstream 649874 2885413 ~ 2887628 (+)
G129993 NA other upstream 751154 2785925 ~ 2786348 (+)
sh3bgrl3 sh3bgrl3,LOC107700758,LOC107689536,LOC106570239,LOC105933927,LOC103368842 other downstream 31494 3572262 ~ 3576193 (+)
G130208 LOC107714468,LOC107559403,LOC107569308 other downstream 219099 3759867 ~ 3760985 (+)
G130372 mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557 other downstream 704000 4244768 ~ 4259085 (+)
ptpn2b ptpn2b,LOC107738314,LOC107552315,LOC107672871,LOC107748370,LOC107666587,LOC108438851 other downstream 853817 4394585 ~ 4406579 (+)
znf706 znf706,LOC107672881,LOC103394271,LOC107748367,LOC107552318,LOC107698658 other downstream 919107 4459875 ~ 4464904 (+)

Expression


Co-expression Network