G130355


Basic Information

Item Value
gene id G130355
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4181499 ~ 4205926 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192441
gctattaatcatgattaatacttttacatatttattgggttacattttctattttttacattttgttatttttcatttaattgtaaataacacgcatttaataaaacaataaatgacgTTCGTTGTAGTGACgttcatgtatatatatctttttaagTACGCTTCTTTTGCACAAAAGGGAATTGTGTACAAAACATGTACTTGGGACAGACgtttcatttcatgttgactttaatcTTGAGATTAGCACGCATGAAAGCTCTAGGACACCTGCAACAGATCTCAGGTTAGTTTAAAATCTGTAGATGTACCCTGTAGAGTCCCGGGATACCCTCGTGACGGTATATTTTCACGAGGGCGTCCATCATTCCCTTGTACTGCTTCCGTGAAGGGTCTGCATTGTACTGCAGCACCAGCCGGGTCTTTGTCACCCAGACTGGGTTGGTGAGGCAAAGCGTCAGCATGCCTGGAAACATGAACAGGGGACCTTCACACCAACATTTAACTGCTCTGTCTGAGATCTTACAGCGTTTTACACGGAAAACACAGCAATATTCACGGCTGCATCCAAAAGCGCTGGGGTTGAGACAGTGTTCATTTTCTATCAGCGATCATTGCACTGCACTGATTTTGTCGGACTGTTTTCTTCCTCGTTATCCTTTTGGCGATTAATCGAAAGCAAAAAGCAGCTCGTTTCACTTCCTAAGCCGATAAACAGTCTCGTTTCTTCTCTATTTTTTGGCCAAATCGGCCACATAGAAAGCCGTTTCGAAGCTGGTCATTCCTGTTATGCAACGCACTTTCACATCCCCATCGTACGTGTATCGATGCGCGTTAGTTTGACTTTACTTTGGTTGCAGCGTTGCCATGGAAACCGCTACTGCTTCTTCAAAAGCGGCACTTAGCggctaaaattaatattaaaaaaaaagatcggCAATgagattttgttgttttgaagtaagtttgaatttattaattcaaaaagaATTCGAAATGTTATTATCGTTTTCTatgtgaatttaaaatgtaatgcatcgTGAGTCGATTTCGTGCACGTTGAAAACGGTTTGCAGAGTGCATTCGTTTCTTTAAGAAACGGAAAactcaaaagaactgcatttaaacaGAAACGTTTCGTGACATTGTACACATTCATTTGAACACGTTCTTGCTTAACAAAAGCATTCGccgtttaatttcttttaaaaagaaaccgTAAGGGTCACCGTCATTATCGGAGGGGAAAGCAACGACCCGAATCATGTTTTACGGTGTTATTTCTATTCAAAAATCACCAACAAcatcaaaataaactaaaatgtaacttatgTAACTTCCCTTATCACGGCGCAAATAATCCAGTCTCGGCCTGCTCTACTCAGTCTGGCCCGTCACGTTACATTTAATGCGGCGCAACCTAAAGTTCGTGCGTAACAGGAAGGATCCAGCAGAAGAACCCAGCGCCTGACCCTCCAGTTGCTCCCGATTTAGCCGTGTTTAGCCGGTGGCTCTTTCTCAGACTGACCTGCCTCGGCTGCAGACACCAGGTGTTCGGCGGCGCTCAGCTCTGTTTGCCGTCCCTCCTGCGTGTACGCTTTAATAGCATTATAACTGcgggaagaagaggaagaaagagacgCGTTACGCTCCccagagccacacacacacacacacacacacacacacacacacagaccggCCTCATTGAATCACCACACGATTTCGGGGAGGGTACAAACACATCAATTATgtcctcatttactcactttcaactgtttttatttgtgggtCGTGTAAAGCTCCGCCGGACGAGCTAAATCTCTCCAGATTTACTGTTATGGTCAGATCTTCACCCGATTTCCCTCTCGTTTAATCTCTTTTTTCCACAGCACGGCTGATTCTATAAACACAATACTAGGACGATACGTTCTTCTCGACCTTACAGCCTGCTTTTTTTGAAGGACAAAGGCCAAATCAACAGGGATCCGTGACTTATATTTGAGCGTTGGCACCCGTGTAaagttgcacacacacacacacacacacacacactttgtttgCCAGGGATCCTGATCTGAAATGAGGTCAGATGACTTCGTGGAGTATCTTCATAACTCATGAAGTATCAACTGACTGAGCACTGTTGGCAGCTTCTTTTTTTGGCCTGTGAACTCAAGAACTcccatattattatttttggtattttaattaattcgtttatttgtatttttttttttggatatattcatttattttcaggatACATATTTTCTGCTCACCCAAAGCtgcatttcttatattaaaaataaagtaggatatattgtaaaatattactgcaatttaaaaacaacaccGGTCAAAAGTTTGCGTCAAAATACGTATTCTATATTTCTAAGtcattgtatattattttgataggttaatttatacacaaatagattactaatatattttaaaatgtaattgatccCTGagatcaaaactgaattttggaaaatgacacattcatttactgacacttttgattaatttaatgtagcCTTGCTAAATAAGAGTATTTTCctagtaaattaaaaaaataaataaataaaataaaattatatatatttttaattctttttaatttaagattttaaaatctg

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU192441 True 2645 lncRNA 0.39 2 4181499 4205926

Neighbor

gene id symbol gene type direction distance location
zfpm2b zfpm2b,LOC107714469,LOC107668719,LOC107689530,LOC107754911,LOC107559400,LOC107569300 coding downstream 362643 3769537 ~ 3818856 (-)
srsf4 srsf4,LOC107569308,LOC107559403,LOC107754925,LOC107689552,LOC107668713,LOC108229131 coding downstream 415095 3759857 ~ 3766404 (-)
tmem200b si:ch211-204a13.2,LOC107714467,LOC107668712,LOC107754915,LOC107569305,LOC107689563,LOC107559402 coding downstream 422092 3754224 ~ 3759407 (-)
LOC122323724 LOC107689534,LOC107567588,LOC107754929 coding downstream 615617 3554796 ~ 3565882 (-)
tpbga tpbgl,LOC107700735,LOC107712598,LOC107550650,LOC107567595,LOC107689565 coding downstream 645206 3531244 ~ 3536293 (-)
cthrc1a cthrc1a,cthrc1,LOC107746934,LOC107668704,LOC107675657,LOC107754923,LOC108438867,LOC108257304 coding upstream 5513 4211439 ~ 4217713 (-)
mc5ra mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557 coding upstream 38767 4244693 ~ 4267138 (-)
rnmt rnmt,LOC107668718,LOC107754922,LOC107566559 coding upstream 79366 4285292 ~ 4296757 (-)
ldlrad4a ldlrad4a,LOC107668709,LOC107675658,LOC107566561,LOC107746928 coding upstream 97489 4303415 ~ 4376360 (-)
seh1l seh1l,LOC107668717,LOC107746927,LOC107748371,LOC107666589 coding upstream 172588 4378514 ~ 4387615 (-)
G130341 NA non-coding downstream 116207 4049813 ~ 4065292 (-)
LOC122323451 NA non-coding downstream 208452 3952618 ~ 3973047 (-)
G130340 NA non-coding downstream 228485 3898061 ~ 3953014 (-)
G130252 NA non-coding downstream 590492 3589262 ~ 3591007 (-)
G130250 NA non-coding downstream 594880 3586144 ~ 3586619 (-)
LOC122323452 NA non-coding upstream 23073 4228999 ~ 4232415 (-)
G130459 NA non-coding upstream 61253 4267179 ~ 4267424 (-)
G130463 NA non-coding upstream 81562 4287488 ~ 4287870 (-)
G130465 NA non-coding upstream 92583 4298509 ~ 4300326 (-)
LOC122323668 NA non-coding upstream 198091 4404017 ~ 4405900 (-)
tmem222b tmem222b,LOC105903612,LOC107550652,LOC107754919,LOC107567586,LOC107700749 other downstream 629674 3537441 ~ 3551825 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other downstream 666820 3508834 ~ 3514679 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other downstream 801572 3363481 ~ 3379927 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other downstream 857671 3313389 ~ 3323828 (-)
G130083 LOC103461248,LOC102786159 other downstream 1031710 3149154 ~ 3149789 (-)
polr2k NA other upstream 334053 4539979 ~ 4541629 (-)
G130696 NA other upstream 537646 4743572 ~ 4941832 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 881318 5087244 ~ 5222883 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other upstream 935579 5141505 ~ 5260164 (-)
G130763 NA other upstream 1039427 5245353 ~ 5252189 (-)

Expression


Co-expression Network