G130421


Basic Information

Item Value
gene id G130421
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4380724 ~ 4382647 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192529
agcacACTCGCAAAAGTTGCGTTCATTTGAAGAACTGTTTGTACGCGCTCCTTTTGAATTCCCGTCTGAAGTGGCCCTTCAAGGGGAACGCGCTCTTAATATCTCCAGTATATAACGATCAGGGTCCAGCTTTTGATTTAGGGTCCACTACTTATGCACCCAACTCCTGAATTGTGAAACTTTTTGTCTATTAACAGAGATACCGTGTCAGAGGTTTCATCATTGCCCGCTAAGATGCACAACATCCAGATAGTTTCTTAGCACGATCTGGGTTCCTGTAACAAAAGACATCTGCTAATTCAGCGAGTGACCAATTAAAACGTAGTATGTTAGTAATTCCAAGGGCATGTTTTGAGCAGATCTGAATGATAGTGTCTCCCTCTGCTGTCCACACTGCATGCTAGCGGCTTCAAACCCACGGCACGGTTCACCCTTTACCAGATAAACGAGGAGTTCaaaaaatgtcatcttttgcgtttcacagaagaaaaaatgttaacaatataGTTcgattttgggtgaactgctcctttaaacGCTGCTACATACGACATGCTCGGTGCGAATGCAGACTAAACTCGTGGAAATTGACCCGactgtgttaaaataaatacgtGAGTAGTACCGCATGACGTCAGGACGATTAATAAGTAGGTCAGTATCGATGGGAATCGGGTTTAGTGTATAACTGGTTTAGAAGCACACAGTAAAGGCTCTTTGTCAGGCAGGTGGCGCTGAACACGCCGCACGGCTCCTTCGGTGGATTAGTAGCTAGACGAGAGTTCAGGTGAGGGTCAGTGAGGTCTTGGTCCAATCCCGAGCatgcagcaaacagccaatcagcacgGCATGCCGTTAGCCTGGCATCAGCTgagctttttttCCTGCCAGCAGAAGCGGCCCCGGCGACCATCTGAGCGGCTCCAGGGACGCCGGCCGCGCTCAGAGCCGCAGCGTGTCCAGAAGAGCCGTTCACCGGGCTGCCGTCTCCTCTCAGGATCCCCGTGCACTTCCAGTTATCCATGTAGTTAGCTGCACGCCAGATCAAACAGCATTCGTTTATATGAGGCACGTAAAGCCgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192529 True 1085 lncRNA 0.48 2 4380724 4382647

Neighbor

gene id symbol gene type direction distance location
fam210aa LOC107668710,LOC107746929,LOC107675659,LOC107566562,LOC107754921 coding upstream 78495 4297248 ~ 4302229 (+)
LOC122324024 slc25a32a,slc25a32,LOC107675661,LOC107668716,LOC107754908,LOC107566558 coding upstream 170594 4201233 ~ 4210130 (+)
LOC122323824 NA coding upstream 327567 4049910 ~ 4053157 (+)
LOC122323815 NA coding upstream 488759 3863228 ~ 3891965 (+)
LOC122323814 NA coding upstream 518114 3859464 ~ 3862610 (+)
LOC122323460 NA coding downstream 9052 4391699 ~ 4393255 (+)
ncaldb ncaldb,ncald,LOC107552316,LOC107550096,LOC107672870,LOC107698641,LOC105006551 coding downstream 34869 4417516 ~ 4430925 (+)
ywhaz ywhaz,LOC107672854,LOC107698656,LOC107550094 coding downstream 85078 4467725 ~ 4480412 (+)
rnf19a rnf19a,LOC107748363,LOC107672852,LOC107738318 coding downstream 120592 4503239 ~ 4528094 (+)
parp10 LOC107672844,LOC107748360,LOC107550091,LOC107698651,LOC107552322,LOC107738320,LOC107552308 coding downstream 159049 4541696 ~ 4551743 (+)
G130383 NA non-coding upstream 112600 4267665 ~ 4268124 (+)
G130381 NA non-coding upstream 114616 4265824 ~ 4266108 (+)
G130338 NA non-coding upstream 181467 4176268 ~ 4199257 (+)
G130336 NA non-coding upstream 220697 4150677 ~ 4160027 (+)
G130318 NA non-coding upstream 416006 3945395 ~ 3964718 (+)
G130426 NA non-coding downstream 24976 4407623 ~ 4408091 (+)
G130449 NA non-coding downstream 115302 4497949 ~ 4498186 (+)
G130604 NA non-coding downstream 414309 4796956 ~ 4802192 (+)
G130599 LOC107563917 non-coding downstream 442797 4825444 ~ 4959162 (+)
G130612 NA non-coding downstream 468237 4850884 ~ 4989753 (+)
G130372 mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557 other upstream 121639 4244768 ~ 4259085 (+)
G130208 LOC107714468,LOC107559403,LOC107569308 other upstream 619739 3759867 ~ 3760985 (+)
sh3bgrl3 sh3bgrl3,LOC107700758,LOC107689536,LOC106570239,LOC105933927,LOC103368842 other upstream 804531 3572262 ~ 3576193 (+)
G130077 NA other upstream 1287010 3093067 ~ 3093714 (+)
phactr4a phactr4a,LOC107550657,LOC107687470,LOC107595895,LOC107689543 other upstream 1402308 2959593 ~ 2978416 (+)
ptpn2b ptpn2b,LOC107738314,LOC107552315,LOC107672871,LOC107748370,LOC107666587,LOC108438851 other downstream 11938 4394585 ~ 4406579 (+)
znf706 znf706,LOC107672881,LOC103394271,LOC107748367,LOC107552318,LOC107698658 other downstream 77228 4459875 ~ 4464904 (+)
pabpc1b pabpc1b,LOC107672855,LOC107698655,LOC107552320,LOC107748365,LOC107738317,LOC107550093 other downstream 101053 4483700 ~ 4493780 (+)
LOC122324250 NA other downstream 105334 4487981 ~ 4488115 (+)
LOC122324251 NA other downstream 106734 4489381 ~ 4489515 (+)

Expression


Co-expression Network