G130449


Basic Information

Item Value
gene id G130449
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4497949 ~ 4498186 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192572
cgagaatatgcttttgtgcaaaaataatgCCAATGTGCTTTGATCCTGGTGCTACCCTATGGAGGAGCCTGTCCTTCAACAAAAAACCACTCTTCAGGTCGTTTGTGCAACCCCAGATACATTTTGAGCTTGTGCATTCTCCGGGATCGCCATGACTACATATCATCGTATATACATCGCAGTGAGCAGCCAAGCAAAGCTCATAACGCAGATAAAAGAGTCAGGCGTTTGGACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192572 True 238 lncRNA 0.45 1 4497949 4498186

Neighbor

gene id symbol gene type direction distance location
ywhaz ywhaz,LOC107672854,LOC107698656,LOC107550094 coding upstream 17537 4467725 ~ 4480412 (+)
ncaldb ncaldb,ncald,LOC107552316,LOC107550096,LOC107672870,LOC107698641,LOC105006551 coding upstream 67024 4417516 ~ 4430925 (+)
LOC122323460 NA coding upstream 104694 4391699 ~ 4393255 (+)
fam210aa LOC107668710,LOC107746929,LOC107675659,LOC107566562,LOC107754921 coding upstream 195720 4297248 ~ 4302229 (+)
LOC122324024 slc25a32a,slc25a32,LOC107675661,LOC107668716,LOC107754908,LOC107566558 coding upstream 287819 4201233 ~ 4210130 (+)
rnf19a rnf19a,LOC107748363,LOC107672852,LOC107738318 coding downstream 5053 4503239 ~ 4528094 (+)
parp10 LOC107672844,LOC107748360,LOC107550091,LOC107698651,LOC107552322,LOC107738320,LOC107552308 coding downstream 43510 4541696 ~ 4551743 (+)
cpsf1 cpsf1,LOC107698636 coding downstream 54446 4552632 ~ 4573445 (+)
ctdp1 ctdp1,LOC107672848,LOC107745039,LOC107748359,LOC107698650 coding downstream 83612 4581798 ~ 4664610 (+)
kcng2 kcng2,LOC107563932,LOC107672828,LOC107745038,LOC107550079,LOC107748384,LOC107698635 coding downstream 184767 4682953 ~ 4706760 (+)
G130426 NA non-coding upstream 89858 4407623 ~ 4408091 (+)
G130421 NA non-coding upstream 115302 4380724 ~ 4382647 (+)
G130383 NA non-coding upstream 229825 4267665 ~ 4268124 (+)
G130381 NA non-coding upstream 231841 4265824 ~ 4266108 (+)
G130338 NA non-coding upstream 298692 4176268 ~ 4199257 (+)
G130604 NA non-coding downstream 298770 4796956 ~ 4802192 (+)
G130599 LOC107563917 non-coding downstream 327258 4825444 ~ 4959162 (+)
G130612 NA non-coding downstream 352698 4850884 ~ 4989753 (+)
G130618 NA non-coding downstream 385088 4883274 ~ 4885284 (+)
LOC122324049 NA non-coding downstream 532839 5031025 ~ 5039776 (+)
pabpc1b pabpc1b,LOC107672855,LOC107698655,LOC107552320,LOC107748365,LOC107738317,LOC107550093 other upstream 4169 4483700 ~ 4493780 (+)
LOC122324251 NA other upstream 8434 4489381 ~ 4489515 (+)
LOC122324250 NA other upstream 9834 4487981 ~ 4488115 (+)
znf706 znf706,LOC107672881,LOC103394271,LOC107748367,LOC107552318,LOC107698658 other upstream 33045 4459875 ~ 4464904 (+)
ptpn2b ptpn2b,LOC107738314,LOC107552315,LOC107672871,LOC107748370,LOC107666587,LOC108438851 other upstream 91370 4394585 ~ 4406579 (+)
LOC122323749 hsbp1l1,LOC107748358,LOC107698649 other downstream 237573 4735759 ~ 4737595 (+)
LOC122323731 snapin,LOC107745054,LOC107672825,LOC107563919,LOC107748383,LOC107550075 other downstream 330232 4828418 ~ 4964733 (+)
G130614 NA other downstream 352406 4850592 ~ 4986957 (+)
G130609 snapin,LOC107745054,LOC107563919,LOC107672825,LOC107748383 other downstream 462727 4960913 ~ 4962700 (+)
G130619 si:dkey-222b8.1,LOC105906332,LOC103033551,LOC101072080,LOC107550085,LOC107698642,LOC107748351,LOC104941765 other downstream 467124 4965310 ~ 4973347 (+)

Expression


Co-expression Network