G130463


Basic Information

Item Value
gene id G130463
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4287488 ~ 4287870 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192611
CGCATCTTGGCACCAGAATAATGTAGGGGTATGATGGCGGCCTTATTTCTCTTGAAAGGCAAGCAGTTTTACTTGTCACTCTTTAATTTGTCTTGtcacaccctagcaaccatttagagcaccctagcaacaatGCACTGAAGTAGTCTAGCATATCTCAGCACCAGAATAATGTATGGGTATGATGCTGAACTCTATTGACTTGATAAGCGAGCCTTTTGGCATATCGCTTTAGCAACTGTACAACAacaccctagcaaccgtttagagcaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192611 True 275 lncRNA 0.44 2 4287488 4287870

Neighbor

gene id symbol gene type direction distance location
mc5ra mc5ra,LOC107746932,LOC107552309,LOC107675655,LOC107754914,LOC107566557 coding downstream 20350 4244693 ~ 4267138 (-)
cthrc1a cthrc1a,cthrc1,LOC107746934,LOC107668704,LOC107675657,LOC107754923,LOC108438867,LOC108257304 coding downstream 69775 4211439 ~ 4217713 (-)
rims2b rims2,LOC107689551,LOC107754909,LOC107569304,LOC107668707,LOC108257276,LOC107559391,LOC107732136,LOC107675654,LOC105892072 coding downstream 88246 4074040 ~ 4199242 (-)
zfpm2b zfpm2b,LOC107714469,LOC107668719,LOC107689530,LOC107754911,LOC107559400,LOC107569300 coding downstream 468632 3769537 ~ 3818856 (-)
srsf4 srsf4,LOC107569308,LOC107559403,LOC107754925,LOC107689552,LOC107668713,LOC108229131 coding downstream 521084 3759857 ~ 3766404 (-)
ldlrad4a ldlrad4a,LOC107668709,LOC107675658,LOC107566561,LOC107746928 coding upstream 15545 4303415 ~ 4376360 (-)
seh1l seh1l,LOC107668717,LOC107746927,LOC107748371,LOC107666589 coding upstream 90644 4378514 ~ 4387615 (-)
psmg2 psmg2,LOC107738327,LOC107748372,LOC107672829,LOC107550101 coding upstream 120863 4408733 ~ 4410934 (-)
grhl2b grhl2b,grhl2,LOC107738316,LOC107672862,LOC107748368,LOC107698657,LOC107552317,LOC107550099 coding upstream 144273 4432143 ~ 4450461 (-)
spag1a spag1a,LOC107738319,LOC107672845,LOC107748364,LOC107698654,LOC107550092 coding upstream 241654 4529524 ~ 4537983 (-)
G130459 NA non-coding downstream 20064 4267179 ~ 4267424 (-)
LOC122323452 NA non-coding downstream 55073 4228999 ~ 4232415 (-)
G130360 NA non-coding downstream 77215 4187442 ~ 4210273 (-)
G130355 NA non-coding downstream 81562 4181499 ~ 4205926 (-)
G130352 NA non-coding downstream 91797 4172551 ~ 4195691 (-)
G130465 NA non-coding upstream 10639 4298509 ~ 4300326 (-)
LOC122323668 NA non-coding upstream 116147 4404017 ~ 4405900 (-)
G130494 NA non-coding upstream 120324 4408194 ~ 4408394 (-)
G130482 NA non-coding upstream 181889 4469759 ~ 4484396 (-)
G130476 pabpc1b,LOC107698655,LOC107748365,LOC107550093,LOC107738317 non-coding upstream 202390 4490260 ~ 4491487 (-)
tmem222b tmem222b,LOC105903612,LOC107550652,LOC107754919,LOC107567586,LOC107700749 other downstream 735663 3537441 ~ 3551825 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other downstream 772809 3508834 ~ 3514679 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other downstream 907561 3363481 ~ 3379927 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other downstream 963660 3313389 ~ 3323828 (-)
G130083 LOC103461248,LOC102786159 other downstream 1137699 3149154 ~ 3149789 (-)
polr2k NA other upstream 252109 4539979 ~ 4541629 (-)
G130696 NA other upstream 455702 4743572 ~ 4941832 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 799374 5087244 ~ 5222883 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other upstream 853635 5141505 ~ 5260164 (-)
G130763 NA other upstream 957483 5245353 ~ 5252189 (-)

Expression


Co-expression Network