CI01000001_04779079_04792659 (SLC17A9B, SLC17A9)


Basic Information

Item Value
gene id CI01000001_04779079_04792659
gene name SLC17A9B, SLC17A9
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4778937 ~ 4792827 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04779079_04792659.mRNA
GTATAAAGAGATGCTTCCGCGAAGAAACTGGGATAGAAACATATTGTTTTCATTGCTTTGCTCTTTTGCCTGTCACGCTTGCAAAGACTGACCCGAGAGGACATCAGAGCAGATAGTCACAAACGGATATATTTGTCGTTGAATGGCAATTCTACAAAAACATGGAAAGAACTCTTGTCCAGATTTGGCCAGTATTAAGGAGAATCCCTCAGAAAATATCGGACAAGCTGGGTCACAGAAGAAGTGGGCAGAGTCGAGTCAGAACTGGACAAGGCCGGTAGCGAGGATATGGACGGTGGTGCTGTTGCTGGGCACATGTTTGCTGTACTGTGCCCGTGTGGCCATGCCTATCTGTGCAGTGAGCATGGGAGAGCGCTTCAACTGGTCCAAAAGAGAGACGGGCATGGTGTTGGGCAGCTTCTTCTGGGGCTACTGCTTCACTCAGGTCCTTGGAGGCTACGTCAGTGACAGGGTGGGAGGAGAGAAAGTGATGCTGTTGTCAGCGGCAGCATGGGGAGCAATGACAGCCTTCACCCCAATCTTAGCCCATTTCTGCTCCCAGCCCATTGTCTCCATGACGGTCTCCCGCTTCCTCATGGGCCTGCTGCAGGGTGTTCACTACCCGTCTCTGGCCAGTCTGTGCTCTCAGAAGGTGGTGGAGAGTGAGAGGGGTTTCCTCATGAGCACAGTAGGAAGCGGCTCATACATGGGGTTAGTGTCTGATCTCGAACTGTATCTGCTGTCTCTGTTTCATGTGGAAATGACTCTGGTGATTGGAGGTATCGGCTCTCTCATGCTGGACTTGTACGGCTGGGAGAGTGTGTTCTACGTCTCTGGGCTTCTGTCTGTGCTGTGGGCGTACTGCATGTGGAAGTATCTGCTCAAAGGAGAGGGTCCCATCATCACACTGGAGTCTCTGGGCAGCGCTGGAACCCAGTCCAAACTGTCCAAGAGAAACTGGCTGCGTCTCTTCAGACAGCCAGCTGTGTGGCTGCATCTGTTTTTCAGTGCTGTCATTATTACACACTTGTGCACCGCCAGCACCTTCTTCACACTGCTGTCATGGCTGCCAACATTTTTCAAGGACACCTTCCCTGATGCCAAGGGTTGGGTGTTTAACGTGATCCCATGGTTTGTGGCCATCCCCTCTTCCCTGTTTAGTGGATGCCTTTCAGACCATCTAATCAGTCAGGCTGGCACACTCATACTCTCGCCCCTTTCTTTGTCTCTTAAAGGTTTTGATACTGCGTCAGTGAGAAAACTTATGCAGTTCTTCTCTATGGGGGTGTCCAGTGTGTTTACTTTGTTTCTGTGCGGGAACAACACCTTCCCCGCAGCTGTGGCTTTTGTGTCTGCTACTATGGGCCTCACCACATTCAGTCACAGTGGGGTTTCAGTAAATGTTCAAGATCTCGCTCCATCCTGTGCCGGTGCTCTGTTTGGGGTGATGAATACCTGTGGAGCTTTTACAGGGGTCATCATGGTGTATTTCTCAGGGTATCTGATTGAGGCCACTGGTTCCTGGGCGTCAGTTTTCGGCCTCATCACTGTGGTGAATCTGCTGGGGCTAGCCACGTTTTTAAGCTTCGCAGAAGCTCGCAGAGTGGACATAGATCTAGCGAAGGGCCGTTACCACAACATCCACATCTGAGAGCACGGGGGATGGGAGCAGAGCAACACCATCAGGATATGGAGCTTATGGATCTGCTGCGTTTTATGTATGAGGGGTGGGAGGGGTCATAGAGAAATCACTGACTCTAAGAAGACAGTCGCTGGTTTCTTCACTATGGCTCTTCAGAAATCTGTTTGGCTGAAGAAA

Function

symbol description
slc17a9b Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including anterior axial hypoblast; axis; cranium; hatching gland; and polster. Human ortholog(s) of this gene implicated in porokeratosis. Orthologous to human SLC17A9 (solute carrier family 17 member 9).
slc17a9 Enables ADP transmembrane transporter activity; ATP transmembrane transporter activity; and guanine nucleotide transmembrane transporter activity. Acts upstream of or within ADP transport; ATP transport; and guanine nucleotide transmembrane transport. Predicted to be located in secretory granule. Implicated in porokeratosis.

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG:

id description
K12303 SLC17A9; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04779079_04792659.mRNA True 1819 mRNA 0.51 13 4778937 4792827

Neighbor

gene id symbol gene type direction distance location
CI01000001_04773238_04776581 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding upstream 1608 4772701 ~ 4777329 (+)
CI01000001_04723418_04724292 NA coding upstream 54579 4723354 ~ 4725671 (+)
CI01000001_04701645_04713999 NA coding upstream 64784 4701645 ~ 4714153 (+)
CI01000001_04688934_04700615 HCK, SRMS coding upstream 78233 4688934 ~ 4700704 (+)
CI01000001_04624476_04679572 NOL4LB coding upstream 99108 4624476 ~ 4679829 (+)
CI01000001_04901365_04901652 NA coding downstream 108448 4901275 ~ 4902567 (+)
CI01000001_04914279_04922772 RND1B, RND1, RND1A coding downstream 121323 4914150 ~ 4923679 (+)
CI01000001_04936808_04943256 PRIM1 coding downstream 143981 4936808 ~ 4943455 (+)
CI01000001_04950531_04960550 NACA, NACA.2 coding downstream 157704 4950531 ~ 4960695 (+)
CI01000001_04962494_04971921 NA coding downstream 169667 4962494 ~ 4972231 (+)
G15395 NA non-coding upstream 20518 4753717 ~ 4758419 (+)
G15389 NA non-coding upstream 52197 4598677 ~ 4726740 (+)
G15404 NA non-coding upstream 212395 4566270 ~ 4566542 (+)
G15371 NA non-coding upstream 287556 4486920 ~ 4491381 (+)
G15416 NA non-coding downstream 4649 4797476 ~ 4797794 (+)
G15419 NA non-coding downstream 8146 4800973 ~ 4801530 (+)
G15789 NA non-coding downstream 142544 4935371 ~ 4935990 (+)
G15798 NA non-coding downstream 210343 5003170 ~ 5003390 (+)
G15800 NA non-coding downstream 212995 5005822 ~ 5006037 (+)
CI01000001_03618075_03620436 NA other upstream 1157486 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3107933 1667762 ~ 1671167 (+)
G13051 NA other upstream 3733785 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4286880 483853 ~ 488825 (+)
G12614 NA other upstream 4467996 309144 ~ 310941 (+)
G15794 NA other downstream 268391 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 493922 5279837 ~ 5287698 (+)
G15995 NA other downstream 919058 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2739745 7531541 ~ 7540586 (+)
G17234 NA other downstream 3239297 8032124 ~ 8032483 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location