G130664


Basic Information

Item Value
gene id G130664
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5404453 ~ 5405566 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192888
TGTTACACAGCGCCGGGTTTGACTTATCTGCcacagagggggaaaaaaaacagacaaggatttttgcactttttatttattttctttaagcaGAACAATTATTCAAAATACCTACTCAAACACCCCTGAgatataaaacagcatttgatCCGACCACATCTGATTGTTTTGTGCACGTGTCAATCTCACTGTCCCGTTCTTGCCTCAGAAACACCACAGCAAAGCAGGCGTTACTCCCTGtgaaggaCAAACTCGTGGCCGACGCGCAACTTTGAGGTGGCCGGATGGACGTCGTCTGAAGGCTTCAAAGAACAGAAATTAGACGTTTCAGTACGTCCCAAGAAGACGCTTACATTGCGCAGAAGGATTTAAAGCGCTGTCTGGGGTTTCTATAACCGTGCTGCACGGAGGAGACAGCAGGGTCTCAAACCACCTCACGTGTATCTAGCAGACACCACAGGAAAAGACAGAGCCACCTCAGACTCGCCCTCGCTGAACGGCCTGCGGGCGAGCAACACGCTTCATATCACCACCCGAAACATTTACAGGTACTCGACTTTAAAAGTATATACAGGAGTTGGATGTGAGCATCTACTCTCTTATAAACACGTGGACCCTAATGaccacgtgtgtgtgtttttttttaatataaagcacCCAGTTTAGCGAAGAccaataaaagcaataataaaactgatttaaaaagtgttgaccaagtttaaaagttaaaaaggtctctttttttaaatattactaggCAAAAATAATATACTCCGTACTACACAGCAAACTAATATAACTAAAACATCGTGCACTCGCAATATAccacattcaaataaacaaaactcacGCGAC

Function

GO:

id name namespace
GO:0072350 tricarboxylic acid metabolic process biological_process

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)

RNA

RNA id representative length rna type GC content exon number start site end site
TU192888 True 855 lncRNA 0.43 2 5404453 5405566

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-92c9.2 si:dkeyp-92c9.2,LOC107598237,LOC107571465,LOC107738595,LOC107731579,LOC107672824,LOC107702702 coding upstream 51193 5344211 ~ 5353260 (+)
thbs3b thbs3b,LOC107598217,LOC107672882,LOC107702531,LOC107738600,LOC105901446 coding upstream 61739 5330425 ~ 5342714 (+)
mtx1b mtx1,mtx1b,LOC107672823,LOC107550195,LOC107598218,LOC103026555,LOC105901471,LOC108410892 coding upstream 75453 5316918 ~ 5329000 (+)
polr3gla LOC107672826,LOC107724664,LOC107598238,LOC107731563,LOC107702713,LOC107550194,LOC107576745 coding upstream 112655 5288167 ~ 5291798 (+)
si:dkey-81h8.1 LOC107672832,LOC107702549,LOC107550200,LOC107710627 coding upstream 125154 5270011 ~ 5279299 (+)
LOC122323295 NA coding downstream 1483 5407049 ~ 5424788 (+)
si:ch211-195b13.1 si:ch211-195b13.1,LOC107738591,LOC107672866,LOC107702504,LOC107731568,LOC103036792,LOC108411161 coding downstream 66216 5471782 ~ 5483668 (+)
eya3 eya3,LOC107738590,LOC107731567,LOC107672865,LOC107702484 coding downstream 79356 5484922 ~ 5500596 (+)
LOC122324215 NA coding downstream 126394 5531960 ~ 5532887 (+)
LOC122323836 LOC107598234 coding downstream 164164 5569730 ~ 5571271 (+)
G130676 NA non-coding upstream 18336 5382816 ~ 5386117 (+)
G130677 NA non-coding upstream 18905 5385136 ~ 5385548 (+)
G130665 NA non-coding upstream 47359 5356870 ~ 5357094 (+)
G130622 NA non-coding upstream 184372 5048394 ~ 5220081 (+)
LOC122324049 NA non-coding upstream 364677 5031025 ~ 5039776 (+)
G130813 LOC107672812,LOC107598225,LOC107571454,LOC107738589,LOC107672867,LOC107731566,LOC107571461 non-coding downstream 97700 5503266 ~ 5505414 (+)
G130833 NA non-coding downstream 142941 5548507 ~ 5548799 (+)
G130835 NA non-coding downstream 159814 5565380 ~ 5587515 (+)
LOC122324017 NA non-coding downstream 205422 5610988 ~ 5612338 (+)
G130855 NA non-coding downstream 208698 5614264 ~ 5632428 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 90275 5223700 ~ 5314178 (+)
LOC122324077 NA other upstream 176227 5225081 ~ 5228226 (+)
LOC122323259 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 224776 5176270 ~ 5179677 (+)
G130637 NA other upstream 241054 5162586 ~ 5163399 (+)
G130613 LOC107745035,LOC100705094,LOC102198470,LOC101485383,LOC107563920,LOC102785635 other upstream 421209 4977885 ~ 4983244 (+)
LOC122324139 LOC107598234,LOC107672810 other downstream 177939 5583505 ~ 5585655 (+)
LOC122323254 sdhaf3,LOC107702681 other downstream 340235 5745801 ~ 5752917 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other downstream 379564 5785130 ~ 5922973 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 966269 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 1057517 6463083 ~ 6488760 (+)

Expression


Co-expression Network