G130708


Basic Information

Item Value
gene id G130708
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4791850 ~ 4922621 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU192962
tgctgcCGCTTTCAATTAGTGTACATAGAAACCACTGCTATTTGAATTTGAAGTGTAAATAGTATATCTGctaaaaaatgctgctttttcaCCTAGTGTAAATAGAATAAATCGCTATTTTCACTTAAATAGCCGCTGCCTACATCATATCTCCCTCAATATGAAACTAATGATGTTGACGATTACATCCATAATAACCGCAGAGCTGTTTGTTTTGGAAAGCGATTCTCCGGGTTAGTGCTCAAACAATATGAAGCAGCAAACAGCAAATGGTTCTGTGCAATGATCAATTCTTAAACACATGAGAAGAAATGAGTGTGTGAAGTTAAGATGAGACACGCCGCCTTGGGAATCGGTCTCAGAAACACCGATCCGACCCTCGTCTGAATGTGATCTTATTGTCCTCGGCAGTTCCACCCCTCAACAGTGCTGTGGTACGGTGATCCTCCGGGAGCAATGCTAACCAACCGGTCGGAAGATGAGCTCCGTGAGCAGACGCACACCGCTCGAGAGCGGCCTGTCCTCGGGAGCCGCCAAATCTTGGCATAAAAAGAACAATATGCCCAGGGTTTGTTTCGTGCTGTATGGACTACACAACACTTCCCAAGACACTCACCCCACTTTTGttagattatttttagaaataaaagccTTTCTGAGAATTTGGTTTGCCCAggacaaatgttattttagcattattatagtatttattaattttttaattagcttttgtaataataagattttcattttaaaaaggttttcatacgtgaaaaatattttaaaataaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192962 True 794 lncRNA 0.39 2 4791850 4922621

Neighbor

gene id symbol gene type direction distance location
LOC122323748 pqlc1,LOC107698648,LOC107672885 coding downstream 56190 4707322 ~ 4735660 (-)
adck5 adck5 coding downstream 210929 4573448 ~ 4580921 (-)
spag1a spag1a,LOC107738319,LOC107672845,LOC107748364,LOC107698654,LOC107550092 coding downstream 253867 4529524 ~ 4537983 (-)
grhl2b grhl2b,grhl2,LOC107738316,LOC107672862,LOC107748368,LOC107698657,LOC107552317,LOC107550099 coding downstream 341389 4432143 ~ 4450461 (-)
psmg2 psmg2,LOC107738327,LOC107748372,LOC107672829,LOC107550101 coding downstream 380916 4408733 ~ 4410934 (-)
LOC122323496 zgc:64022,LOC107672878,LOC107745031,LOC107748382,LOC107563933,LOC107550074,LOC107683352,LOC105906342,LOC108272618 coding upstream 129705 5052326 ~ 5060357 (-)
LOC122323497 LOC107550063,LOC107672839,LOC107676099,LOC107550192,LOC107676100 coding upstream 140544 5063165 ~ 5065170 (-)
LOC122323498 LOC107550063,LOC107676099,LOC107550192,LOC107672839,LOC107676100 coding upstream 154093 5076714 ~ 5078874 (-)
LOC122323501 LOC107569538,LOC107554410,LOC107703160 coding upstream 161272 5083893 ~ 5089261 (-)
LOC122323831 sema4ab,LOC107702572,LOC107731578,LOC107705066,LOC107598230,LOC107672813 coding upstream 215809 5138430 ~ 5143254 (-)
G130690 NA non-coding downstream 47295 4738805 ~ 4744555 (-)
G130476 pabpc1b,LOC107698655,LOC107748365,LOC107550093,LOC107738317 non-coding downstream 300363 4490260 ~ 4491487 (-)
G130482 NA non-coding downstream 307454 4469759 ~ 4484396 (-)
G130494 NA non-coding downstream 383456 4408194 ~ 4408394 (-)
LOC122323668 NA non-coding downstream 385950 4404017 ~ 4405900 (-)
G130721 NA non-coding upstream 28846 4951467 ~ 4953272 (-)
LOC122323269 NA non-coding upstream 220644 5143265 ~ 5158004 (-)
G130738 NA non-coding upstream 253849 5176470 ~ 5222159 (-)
G130750 NA non-coding upstream 267815 5190436 ~ 5192653 (-)
LOC122323253 NA non-coding upstream 314688 5237309 ~ 5240081 (-)
polr2k NA other downstream 250221 4539979 ~ 4541629 (-)
tmem222b tmem222b,LOC105903612,LOC107550652,LOC107754919,LOC107567586,LOC107700749 other downstream 1240025 3537441 ~ 3551825 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other downstream 1277171 3508834 ~ 3514679 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other downstream 1411923 3363481 ~ 3379927 (-)
LOC122323345 fam46bb,LOC107712594,LOC107700817,LOC107737782,LOC108413340,LOC103370123 other downstream 1468022 3313389 ~ 3323828 (-)
LOC122323502 s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199 other upstream 164623 5087244 ~ 5222883 (-)
G130744 sema4ab,LOC107702572,LOC107672813,LOC107598230,LOC107731578,LOC107705066 other upstream 218884 5141505 ~ 5260164 (-)
G130763 NA other upstream 322732 5245353 ~ 5252189 (-)
LOC122324254 NA other upstream 481895 5404516 ~ 5405636 (-)
G131006 LOC107754818,LOC107731580 other upstream 1439726 6362347 ~ 6363172 (-)

Expression


Co-expression Network