LOC122323502 (s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199)


Basic Information

Item Value
gene id LOC122323502
gene name s100v2,LOC107672873,LOC107598219,LOC107748347,LOC107676101,LOC107550199
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5087244 ~ 5222883 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193035
tttagttgttttttttccctcccgaGTGGGAGGATTCAGGACGTCGGCCAAGATGTGACAGAAGCGATGGGACGCTGAGAGCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGGCCATTAACACCTTGGTCACAAACTTCCATTCTGCTTCCCCTGATAACCGGCCTCCTCTGAAGGTAGATGAGTTCAAGCATCTCCTCTCCTCCCAGCTGCCATCTTTAGTCAAGTCGGATAATTTTGGAGAAGTGCTGAAGCAAATGGGAGTGAAAGATGGGGAAGGCGTCAGCTTCAAGCACTTTTGGAGCCTGATCCAGAATTTGGCCACAACCCAGCATGGTCTGCTGAGCCACGAGAAGTTGTCCAAATGCACCTGCCTTTTACTATGAGCCGTGGGCTTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACTTGTCTCTGGATTTACAGCTTCCTGtgcatttaagtgtttttaagtaaattgatgaataaataaaacctttctttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAACTGTTGcttgttgttggtgtttttatATCTATTCTCAGTTATTCTATT
>TU193036
tttagttgttttttttccctcccgaGTGGGAGGATTCAGGACGTCGGCCAAGATGTGACAGAAGCGATGGGACGCTGAGAGCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGGCCATTAACACCTTGGTCACAAACTTCCATTCTGCTTCCCCTGATAACCGGCCTCCTCTGAAGGTAGATGAGTTCAAGCATCTCCTCTCCTCCCAGCTGCCATCTTTAGTCAAGTCGGATAATTTTGGAGAAGTGCTGAAGCAAATGGGAGTGAAAGATGGGGAAGGCGTCAGCTTCAAGCACTTTTGGAGCCTGATCCAGAATTTGGCCACAACCCAGCATGGTCTGCTGAGCCACGAGAAGTTGTCCAAATGCACCTGCCTTTTACTATGAGCCGTGGGCTTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACTTGTCTCTGGATTTACAGCTTCCTGtgcatttaagtgtttttaagtaaattgatgaataaataaaacctttctttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAACaaaaaaaaaaaaaaaaaaa
>TU193037
GGACGTCGGCCAAGATGTGACAGAAGCGATGGGACGCTGAGAGCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGGCCATTAACACCTTGGTCACAAACTTCCATTCTGCTTCCCCTGATAACCGGCCTCCTCTGAAGGTAGATGAGTTCAAGCATCTCCTCTCCTCCCAGCTGCCATCTTTAGTCAAGTCGGATAATTTTGGAGAAGTGCTGAAGCAAATGGGAGTGAAAGATGGGGAAGGCGTCAGCTTCAAGCACTTTTGGAGCCTGATCCAGAATTTGGCCACAACCCAGCATGGTCTGCTGAGCCACGAGAAGTTGTCCAAATGCACCTGCCTTTTACTATGAGCCGTGGGCTTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACTTGTCTCTGGATTTACAGCTTCCTGtgcatttaagtgtttttaagtaaattgatgaataaataaaacctttctttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAACaaaaaaaaaaaaaaaaaaa
>TU193038
TTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACCTGTCTCTGGATTTACAGCTTCCTGTGCATTTAACAAGTGTTTTTAAGTaaattgatgaataaataaaacctttcttttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAACTGTTGcttgttgttggtgtttttatATCTATTCTCAGTTATTCTATT
>TU193039
GGACGTCGGCCAAGATGTGACAGAAGCGATGGGACGCTGAGAGCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGGCCATTAACACCTTGGTCACAAACTTCCATTCTGCTTCCCTGATAACCGGCCTCCTCTGAAGGTAGATGAGTTCAAGCATCTCCTCTCCTCCCAGCTGCCATCTTTAGTCAAAGGTAAAGCTATATTCATACCAACAGACACCAAGTGACTCAATACTGTTTTTACTCATTTCCTGTGATTGCACATAGCATAGCTGTTAATAAGTTCAATATGAGAAAATGGGAAAATCCGACAGCGAAACCAGTTCAGTGATTATATTGTTAACAGTGATATTAGGCCCATAATTACTTTGTGTCGTTTTAAGGCCTGTGTGTTGTTGCTCGTGGTGTTCTTGTCTTTGTGTAGGAAACACAACGCGCCGTCCTTGTTATTATTGGCTCCACGTGCTGGAAAGACCAGTTTTGTTTAACCTTTAAGCCAGCATGCAggttctagttattattatctGTACATTTAACTTATTTCGATagcaaaaacaggtttttatttcatatacataaagttgAAGGCTATACACATGCCTGTAAAGCTGTCATCGTATTTAAGGAAAGGAATCCGCAACCAAACCCTGAATGAAACCTTTTTTCACTCTGAGGGATCGGCTGGTTTCACAGAGAACGTTG
>TU193040
TTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACCTGTCTCTGGATTTACAGCTTCCTGTGCATTTAAgtgtttttaagtaaattgatgaataaataaaacctttctttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAAaaaaaaaaaaaaac
>XM_043217366.1
tttttccctcccgaGTGGGAGGATTCAGGACGTCGGCCAAGATGTGACAGAAGCGATGGGACGCTGAGAGCGAGAAGTAAGGAGCACTGCGCGACGGGAACAGCGAAGTCTATCAAGAGCCAGGAAAATAAAAGCGATCACTTCAAATGGCGACGCAGTATTCTGACCTCGAGAAGGCCATTAACACCTTGGTCACAAACTTCCATTCTGCTTCCCCTGATAACCGGCCTCCTCTGAAGGTAGATGAGTTCAAGCATCTCCTCTCCTCCCAGCTGCCATCTTTAGTCAAGTCGGATAATTTTGGAGAAGTGCTGAAGCAAATGGGAGTGAAAGATGGGGAAGGCGTCAGCTTCAAGCACTTTTGGAGCCTGATCCAGAATTTGGCCACAACCCAGCATGGTCTGCTGAGCCACGAGAAGTTGTCCAAATGCACCTGCCTTTTACTATGAGCCGTGGGCTTCAACTGCATCTGCCACTAAGACCTGGTCTCTCTGCATTTATCCAGAACCATTTATCCATCTCCAAACAAAACACTTAACTTTTCTTCCTAAGCATTCCAATAAATAAGCAAACTTTTATAGgcctacttttttattttaaataatgtggcAAGCAGTACAGCCATCATCTCTCATCATAGCAAGCATCAAGTAAATCTTAATGTACAGACCAGTTTACTACTTCATATACCATAACTGGAGTCCAATTGTTTTTCACTTGTCTCTGGATTTACAGCTTCCTGtgcatttaagtgtttttaagtaaattgatgaataaataaaacctttctttttttcttgcgATAACACTACATATAAACATACTGCAATAATCGTCTAGCATGTGTATTTCCAGACAAGAGTGGTTTATGcaagcaaaaacaataataacaacactttttatttatattttgtaatactgTTTTTTATGGCCAAAAATCAATAACTCCCTGAATTATTGTCTAATAAAATTTATAACAAAAA

Function

symbol description
s100v2 Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Predicted to be active in extracellular space and perinuclear region of cytoplasm. Is expressed in gill; gut; and hematopoietic system. Orthologous to several human genes including S100A14 (S100 calcium binding protein A14).

NR:

description
PREDICTED: protein S100-A14-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193035 False 1042 TUCP 0.40 3 5100821 5104353
TU193036 False 1014 TUCP 0.39 4 5087244 5104353
TU193037 True 1075 TUCP 0.40 6 5087244 5222883
TU193038 False 577 lncRNA 0.31 2 5100821 5219970
TU193039 False 773 lncRNA 0.43 2 5220812 5222883
TU193040 False 539 lncRNA 0.30 3 5094412 5219970
XM_043217366.1 False 983 mRNA 0.40 3 5100869 5104342

Neighbor

gene id symbol gene type direction distance location
LOC122323498 LOC107550063,LOC107676099,LOC107550192,LOC107672839,LOC107676100 coding downstream 8370 5076714 ~ 5078874 (-)
LOC122323497 LOC107550063,LOC107672839,LOC107676099,LOC107550192,LOC107676100 coding downstream 22074 5063165 ~ 5065170 (-)
LOC122323496 zgc:64022,LOC107672878,LOC107745031,LOC107748382,LOC107563933,LOC107550074,LOC107683352,LOC105906342,LOC108272618 coding downstream 26887 5052326 ~ 5060357 (-)
LOC122323699 chtopa,chtop,LOC107672843,LOC107563917,LOC107698644 coding downstream 259329 4821737 ~ 4827915 (-)
LOC122323359 si:dkey-222b8.4,LOC107672841,LOC107698638,LOC107563916,LOC107745050 coding downstream 267217 4809114 ~ 4820027 (-)
LOC122323489 NA coding upstream 10898 5233781 ~ 5236532 (-)
si:dkeyp-92c9.4 LOC107756116,LOC107672827,LOC107598229 coding upstream 58560 5281443 ~ 5287161 (-)
txnipa txnipa,txnip,LOC107672857,LOC107702541,LOC107738596,LOC107731569,LOC108410889 coding upstream 87865 5310748 ~ 5314165 (-)
myo1g si:dkeyp-92c9.3,LOC107672858,LOC107702514,LOC107731552,LOC107738593,LOC107571466,LOC107598227 coding upstream 137170 5360053 ~ 5397563 (-)
si:dkey-154b15.1 NA coding upstream 175391 5398274 ~ 5403131 (-)
G130710 syt11a,LOC107745033,LOC107672847,LOC107748350,LOC107676104 non-coding downstream 73554 4873734 ~ 5013690 (-)
G130717 NA non-coding downstream 97481 4850592 ~ 4989763 (-)
G130716 NA non-coding downstream 100278 4849149 ~ 4986966 (-)
G130713 NA non-coding downstream 122415 4830024 ~ 4964829 (-)
G130721 NA non-coding downstream 133972 4951467 ~ 4953272 (-)
LOC122323253 NA non-coding upstream 14426 5237309 ~ 5240081 (-)
G130768 NA non-coding upstream 48957 5271840 ~ 5274921 (-)
G130764 NA non-coding upstream 122712 5345595 ~ 5353262 (-)
G130801 NA non-coding upstream 210679 5433562 ~ 5433929 (-)
G130804 NA non-coding upstream 217543 5440426 ~ 5440865 (-)
G130696 NA other downstream 145412 4743572 ~ 4941832 (-)
polr2k NA other downstream 545615 4539979 ~ 4541629 (-)
tmem222b tmem222b,LOC105903612,LOC107550652,LOC107754919,LOC107567586,LOC107700749 other downstream 1535419 3537441 ~ 3551825 (-)
kdf1b LOC107700730,LOC107712602,LOC107550653,LOC107754920,LOC107567594,LOC107689538 other downstream 1572565 3508834 ~ 3514679 (-)
zdhhc18b zdhhc18b,LOC107700701,LOC107737765,LOC107689541,LOC108413341,LOC107550656,LOC107570996 other downstream 1707317 3363481 ~ 3379927 (-)
G130763 NA other upstream 22470 5245353 ~ 5252189 (-)
LOC122324254 NA other upstream 181633 5404516 ~ 5405636 (-)
G131006 LOC107754818,LOC107731580 other upstream 1139464 6362347 ~ 6363172 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other upstream 1404715 6627598 ~ 6639220 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other upstream 1425507 6648390 ~ 6649389 (-)

Expression


Co-expression Network