G130891 (asns,LOC107754811,LOC107672863,LOC107731557,LOC107702657)


Basic Information

Item Value
gene id G130891
gene name asns,LOC107754811,LOC107672863,LOC107731557,LOC107702657
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5930852 ~ 5932842 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193270
TACCCTGGTGTGGTTGTAGATCTCGCCGTTGTAGCAGAGCCAAAGGTAGGGGAACTTCTTGACGCGCAGGGGCTGCATGCCGTACAGCTGGTCCACGATGGCGAGGCGGTGGAAGCCGAAGCAGCAGTTGGTGAAGCCGTTGACATTCTCGAAGCGGAAAGCGTCCGGTCCACGATGAGCGATTTTCATAGCATTGCTGCACTGAACCGAAAGGCACTCATCGCTCCCGAACAGGGCCCATATACCACACATTCTGATCAGGCGGACCTAGTAATGCCTGTAAAAGACGCTGGATTTGGTCTACGTTGGTTGAGATGGGAGAGCTTCCCGTTCTTCTTCGGCGATGCTCGGCTGATGAAACACACGTGCGGTGTTTCTGCAGATTCTTGTCGTTTCCGCC
>TU193271
TACCCTGGTGTGGTTGTAGATCTCGCCGTTGTAGCAGAGCCAAAGGTAGGGGAACTTCTTGACGCGCAGGGGCTGCATGCCGTACAGCTGGTCCACGATGGCGAGGCGGTGGAAGCCGAAGCAGCAGTTGGTGAAGCCGTTGACATTCTCGAAGCGGAAAGCGTCCGGTCCACGATGAGCGATTTTCATAGCATTGCTGCACTGAACCGAAAGGCACTCATCGCTCCCGAACAGGGCCCATATACCACACATTCTGATCAGGCGGACCACTAGTAATGCCTGTAAAAGACGCTGGATTTGGTCTACGTTGGTTGAGATGGGAGAGCTTCCCGTTCTTCTTCGGCGATGCTCGGCTGATGAAACACACGTGCGGTGTTTCTGCAGATTCTTGTCGTTTCCGCC
>TU193272
TACCCTGGTGTGGTTGTAGATCTCGCCGTTGTAGCAGAGCCAAAGGTAGGGGAACTTCTTGACGCGCAGGGGCTGCATGCCGTACAGCTGGTCCACGATGGCGAGGCGGTGGAAGCCGAAGCAGCAGTTGGTGAAGCCGTTGACATTCTCGAAGCGGAAAGCGTCCGGTCCACGATGAGCGATTTTCATAGCATTGCTGCACTGAACCGAAAGGCACTCATCGCTCCCGAACAGGGCCCATATACCACACATTCTGATCAGGCGGACTAGTAATGCCTGTAAAAGACGCTGGATTTGGTCTACGTTGGTTGAGATGGGAGAGCTTCCCGTTCTTCTTCGGCGATGCTCGGCTGATGAAACACACGTGCGGTGTTTCTGCAGATTCTTGTCGTTTCCGCCCTGGCGCTGATTGGTCCAAACGTAACGACGTTGCCGTGACGTGACCCTTC

Function

symbol description
asns Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Predicted to act upstream of or within cellular amino acid biosynthetic process and glutamine metabolic process. Predicted to be active in cytosol. Is expressed in liver and male organism. Orthologous to human ASNS (asparagine synthetase (glutamine-hydrolyzing)).

NR:

description
PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193270 False 400 lncRNA 0.55 2 5930852 5932792
TU193271 False 402 lncRNA 0.55 2 5930852 5932792
TU193272 True 449 lncRNA 0.55 2 5930852 5932842

Neighbor

gene id symbol gene type direction distance location
LOC122323385 sdhaf3,LOC107702681 coding upstream 47878 5876050 ~ 5882974 (+)
col28a1a col28a1,LOC107754784 coding upstream 191667 5725368 ~ 5739185 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding upstream 213171 5716696 ~ 5717681 (+)
LOC122323266 NA coding upstream 316722 5613068 ~ 5614130 (+)
LOC122323836 LOC107598234 coding upstream 359581 5569730 ~ 5571271 (+)
jarid2b jarid2b,LOC107754814,LOC107694367,LOC107702394,LOC107731546 coding downstream 128707 6061549 ~ 6162543 (+)
mylipa mylipa,LOC107754815,LOC107694366,LOC107584315,LOC107731572 coding downstream 301183 6234025 ~ 6252339 (+)
npr1a npr1a,npr1,LOC107694365,LOC107677481,LOC107754786,LOC107731544,LOC108435512 coding downstream 333541 6266383 ~ 6344260 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding downstream 413947 6346789 ~ 6361192 (+)
gon4la LOC107754817,LOC107694363,LOC107584344 coding downstream 432676 6365518 ~ 6377599 (+)
G130890 LOC107731557,LOC107702657,LOC107568288 non-coding upstream 5881 5788566 ~ 5924971 (+)
G130861 NA non-coding upstream 256008 5674295 ~ 5674844 (+)
G130858 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107731575,LOC107571463 non-coding upstream 260320 5659533 ~ 5670532 (+)
G130855 NA non-coding upstream 298424 5614264 ~ 5632428 (+)
LOC122324017 NA non-coding upstream 318514 5610988 ~ 5612338 (+)
G130940 NA non-coding downstream 234784 6167626 ~ 6169359 (+)
G130944 NA non-coding downstream 294904 6227746 ~ 6228087 (+)
LOC122324219 NA non-coding downstream 322164 6255006 ~ 6263954 (+)
G130950 NA non-coding downstream 398823 6331665 ~ 6334244 (+)
G131010 NA non-coding downstream 460074 6392916 ~ 6393957 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 7879 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 177935 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 345197 5583505 ~ 5585655 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 616674 5223700 ~ 5314178 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 438993 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 530241 6463083 ~ 6488760 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other downstream 587078 6519920 ~ 6526080 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 759132 6691974 ~ 6696204 (+)
G131183 NA other downstream 901027 6833869 ~ 6836858 (+)

Expression


Co-expression Network