G130893


Basic Information

Item Value
gene id G130893
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5923032 ~ 5953470 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193275
AATGGGGAACAGTACAGATCTACGACAAGAGGCGTTAACGGATAAAAGCGTGGTCACATCCGCTTCCTAAAGGATCATTTCATTCTGTGATGTTCATCGATTCtgacttttgtttctttttttccaattcaggccagaaataaaaatgatttggcGTTGTGGTATTATGGCCGACTCGCACCTGTGgcagttctttttaaaaaggatCAAACGTGTTTTCTGTCACGACATCTCTCCCGGTGTTGTGGAGCATTAAAGCGAAGCGGTGTCCTTTCTAAGATACTCAGAGATTTGTGCTCGATACATAGTGCCTCATAGTGTTTTCACCGTGACTGATGATGTTGTTTTAATAGCGCCGGGCCGGGTGTGATGTCATGTCCTGTCACCGCTACGAGCAAAGGTTTTGCTACCTTGATATCTGTGTGATTGTagcttgatattaaaaatattttctttattgaagaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193275 True 477 lncRNA 0.41 2 5923032 5953470

Neighbor

gene id symbol gene type direction distance location
LOC122323385 sdhaf3,LOC107702681 coding upstream 40058 5876050 ~ 5882974 (+)
col28a1a col28a1,LOC107754784 coding upstream 183847 5725368 ~ 5739185 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding upstream 205351 5716696 ~ 5717681 (+)
LOC122323266 NA coding upstream 308902 5613068 ~ 5614130 (+)
LOC122323836 LOC107598234 coding upstream 351761 5569730 ~ 5571271 (+)
jarid2b jarid2b,LOC107754814,LOC107694367,LOC107702394,LOC107731546 coding downstream 108079 6061549 ~ 6162543 (+)
mylipa mylipa,LOC107754815,LOC107694366,LOC107584315,LOC107731572 coding downstream 280555 6234025 ~ 6252339 (+)
npr1a npr1a,npr1,LOC107694365,LOC107677481,LOC107754786,LOC107731544,LOC108435512 coding downstream 312913 6266383 ~ 6344260 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding downstream 393319 6346789 ~ 6361192 (+)
gon4la LOC107754817,LOC107694363,LOC107584344 coding downstream 412048 6365518 ~ 6377599 (+)
G130861 NA non-coding upstream 248188 5674295 ~ 5674844 (+)
G130858 rims3,LOC107672861,LOC107598211,LOC107702460,LOC107731575,LOC107571463 non-coding upstream 252500 5659533 ~ 5670532 (+)
G130855 NA non-coding upstream 290604 5614264 ~ 5632428 (+)
LOC122324017 NA non-coding upstream 310694 5610988 ~ 5612338 (+)
G130835 NA non-coding upstream 335517 5565380 ~ 5587515 (+)
G130940 NA non-coding downstream 214156 6167626 ~ 6169359 (+)
G130944 NA non-coding downstream 274276 6227746 ~ 6228087 (+)
LOC122324219 NA non-coding downstream 301536 6255006 ~ 6263954 (+)
G130950 NA non-coding downstream 378195 6331665 ~ 6334244 (+)
G131010 NA non-coding downstream 439446 6392916 ~ 6393957 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 59 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 170115 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 337377 5583505 ~ 5585655 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 608854 5223700 ~ 5314178 (+)
LOC122324077 NA other upstream 694806 5225081 ~ 5228226 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 418365 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 509613 6463083 ~ 6488760 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other downstream 566450 6519920 ~ 6526080 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 738504 6691974 ~ 6696204 (+)
G131183 NA other downstream 880399 6833869 ~ 6836858 (+)

Expression


Co-expression Network