G130940


Basic Information

Item Value
gene id G130940
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6167626 ~ 6169359 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193325
TAttgagacacaaacacaaccgAACACAAAACACTCTTACAACACAATTTCAGTCCAAACTACAAAACTTGCCCTGGTCCTGATCCTTTTAAAAATAGAGGATTAATAGAGAATTTATGCACATTACCACCTtgctgcatgtaaaaaaaaaaatgacccagTGGGCAATCCTAACCTTGTCTTCTTGATTGCCAATTGGCTGATCCTAGCCCCACCATCAGTGAGCGTCTATCAGGCTAGTTTAGTTTGTTTGGTGTGTTTCACAACTCAACTCTGTTTGTTCTTTTGCAGTCGGCTTGTTATGTCCCGGGCTGTTCCTTAACTGCTCTTTGGCTAATCTTGGCCCCGTCTTCTTTATGACCCTCTCGCTGATCCTGGCTCACTTTGGGGCTGGTTTTAGCCCTTTCTTGTCAATGAGCCATGGACTGATGGCTTTCTTACTGACCAAACTGGTAATCCTATCCTTGCTTTTTTATGACCCAATGTCGGATCTTATCCCTGCcttattaaaatgcatctattatgggtaatgaaaggttcatattttggttttaggagtcAACAACAGGTTAACATGCATACatggtcaaaaacactttcattgtctttatttttaccatACTTGCTCAACGACTCCCACACGATTCACTCAACGATTCATTCTTCCAAATCCCTCCTTTGTGTGATACTAATCTATGGTgattgatctttttttaatttaaattttgacTGTAAAgcctgataaagcagtgtttgtgagcgcaGTGGTAATTTTACTGCTCCAAAAGCGATACTtggtggcaaagaatgaatccTGACCCACTGGCTGATCTTAGCTCAGTCTTGCTACTCTTCCAGTTGTTTCTTTAATGTAGTTTATCTACCACTGGATCAGCATTACCCACTGAACTTGCTGTTCTCTTGAGCTTCTCTTTTGTACTTTACCATGCAGCATGTGTCCTCTAAATTGACCAGTTGAAGGATGAAAGCAATAATCAGTTTATCTGCTTCAGGACTGGGAATAGCATCCCCAGTGCCATATCTTGAGTGCTGTGGAACCAggacttttatttgtaaaaacagcTACTGAGTGTTTTTGTACCAGACCATCTAaaacagtggttactaaggggtgccgtgagatcttttgagggtgccgccaaaatttcaacaaattttttttattaaggcagaatcagtgtaaacagtattctcatatcatctaggactaggtataaggtgttgttgcatgcaaactctcgaaatgaaacaaataaataaataataataaaaaagctacgaagattttaaatatctatttccttataagggtgccgggaacttttgaaaggctttccaagggtgcctcaaacaagaaaaggttgggaaccactgatctaaaaagacatttttcagatattttaaaaggtttgttAAAATTTTTCACAGGCATACAGCATGTTTAATTTTTGGAAAATAGTGTCTGTTTGTATTACTGTCTCTGGCACGTTTTGATCAGGTTCGGGTTTGAGCCAGGGGAACGAGCGTAGCTCACCTCTTCTCTCCGCGATCTGTAGATATCCTGTGGACAGGTAGTGCTCCATGTCCTGCTGAAAAGCCTCCTCAAAAAACTTTTGCCTGTCCTTTAGCTTTACCTGCGGCTGAACAGGCTCTGCCTCCGGTACTCTCTGAGCATGCTCCAGCTCCAGCTCCG

Function

GO:

id name namespace
GO:1902911 protein kinase complex cellular_component
GO:0016533 protein kinase 5 complex cellular_component
GO:1902554 serine/threonine protein kinase complex cellular_component

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05030 Cocaine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU193325 True 1714 lncRNA 0.41 2 6167626 6169359

Neighbor

gene id symbol gene type direction distance location
jarid2b jarid2b,LOC107754814,LOC107694367,LOC107702394,LOC107731546 coding upstream 5083 6061549 ~ 6162543 (+)
LOC122323385 sdhaf3,LOC107702681 coding upstream 284652 5876050 ~ 5882974 (+)
col28a1a col28a1,LOC107754784 coding upstream 428441 5725368 ~ 5739185 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding upstream 449945 5716696 ~ 5717681 (+)
LOC122323266 NA coding upstream 553496 5613068 ~ 5614130 (+)
mylipa mylipa,LOC107754815,LOC107694366,LOC107584315,LOC107731572 coding downstream 64666 6234025 ~ 6252339 (+)
npr1a npr1a,npr1,LOC107694365,LOC107677481,LOC107754786,LOC107731544,LOC108435512 coding downstream 97024 6266383 ~ 6344260 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding downstream 177430 6346789 ~ 6361192 (+)
gon4la LOC107754817,LOC107694363,LOC107584344 coding downstream 196159 6365518 ~ 6377599 (+)
LOC122323487 LOC107694355,LOC107754822,LOC107595588,LOC107711322 coding downstream 265873 6435232 ~ 6443128 (+)
G130893 NA non-coding upstream 214156 5923032 ~ 5953470 (+)
G130899 NA non-coding upstream 232909 5798511 ~ 5934717 (+)
G130891 asns,LOC107754811,LOC107672863,LOC107731557,LOC107702657 non-coding upstream 234784 5930852 ~ 5932842 (+)
G130890 LOC107731557,LOC107702657,LOC107568288 non-coding upstream 242655 5788566 ~ 5924971 (+)
G130861 NA non-coding upstream 492782 5674295 ~ 5674844 (+)
G130944 NA non-coding downstream 58387 6227746 ~ 6228087 (+)
LOC122324219 NA non-coding downstream 85647 6255006 ~ 6263954 (+)
G130950 NA non-coding downstream 162306 6331665 ~ 6334244 (+)
G131010 NA non-coding downstream 223557 6392916 ~ 6393957 (+)
G131016 LOC107677454,LOC107595587,LOC107584310,LOC107694359,LOC107754821 non-coding downstream 236026 6405385 ~ 6409741 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 244653 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 414709 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 581971 5583505 ~ 5585655 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 853448 5223700 ~ 5314178 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 202476 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 293724 6463083 ~ 6488760 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other downstream 350561 6519920 ~ 6526080 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 522615 6691974 ~ 6696204 (+)
G131183 NA other downstream 664510 6833869 ~ 6836858 (+)

Expression


Co-expression Network