G131042 (gabbr1b,LOC107595614,LOC107677456,LOC107584305)


Basic Information

Item Value
gene id G131042
gene name gabbr1b,LOC107595614,LOC107677456,LOC107584305
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6519920 ~ 6526080 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193457
AGCGTTGTACAGAATCTATCAtagtacaaatacaaatatattttcaataccACATACGAATACCTTTGACTTTATATACTTCATACTTTGTGCAAGAGAATACATTTATCATGTACATTTAGCATTTACACAATTAACATTTGTGCATATCATCACTATCATGATTATTATTGAACCACCATTTGACAAgaaatgatgaataaaatattacagtagGCCGATAATAAACACCATGGTGGGGTTTGTCCTCGTGTTCACGACATCCTCCCCAGGATTCCTGGAGAGTCATCTTGGATCAGTGTAAATCATCAGAGCACCATTTAGCCAATCACAAGCGCTTATGACAAACCAATTGGATGACATCACAATGCAGTTCGATCTCTATCTGTGTTCAGAATGGAATGCTAGCATACCGTAACACAGTATATATAGTACAATACTGCCAGTGTATACTGTATTCTGTCTCATTTTCCATCAAACTGTAAATTGCATCCAGTTATCATTTGATAAAATACAGttgatatgcattttataagGCCTAGTTAAAAAATGTGGCTAAAAAGTAACTTTTGGgtgcttaatattatttaatgctgGTTTATAATGCAAACGCGACTTTATTGGTTCTGGGAGTATttcttcaaatacatttttctatagtgagttaaaaaagtattattttaaagccaTGAACCAAACCAACCAGCTACGAGATGAATCACAAAATTTttcaacaatataaaaaagtattagaAAATTGGACAAAAAGACAAAGGTACAACAATGGGAAAGAACTACAATCCCATGAAGCATTGCAAATGACAAATGCGACAAAAGCGAGAAATATAGACTGTTGATatagaaacaatatatttcttttattgcaaaatgtgcatattatgCATACAAACATATAAGCAGTTTAACAGTGCAGGGAAACCGACTCTAAATCATTTGCAGAGCTTCATGagattttttgtaattttctgaTTGGTAGAGATTCTCAgaattatgggtaatgtagGTTTTCACGAGGAATTCCACTTTTAAGCATGACTACaagaaaaaatggttttaaatttgGGCTTCATATTCACATTATGGCTTCAATAAAAGACGATCAACCTCGTAGCTCAGAGTAAGTTACTATTAAACAACTGCTTTCCCTATAAAGAGAATGACCAGgatttttactttgtttcaaTCCGTCGCGGTTTGAGAGATTTCATTGCCTCGTACTGCACCCATACATACTATACACTACACTAAGGGTAGTATACTAGCGTGCGATTCCAAACACAGCCTATATATGTTTTAGAAAACCAGCAGCAACATTCCAAATATTATGAGGTATTAACAGTTCTCAAAAATAGTGAGCAATGTGCTATTGTCATAAGCACTTATGAATAGACAAATGACTCTCATAGTCCCTGTAgggtttttctttctgtacatcACATCCCTCCAAATGAGAGAGGGACTTTGCCACCTCAAAGGAGGAAATGAGGCAGACGACACAAACCATTTATAGTCCAGCTGAAACAAAGCAAACTTTGCTATACAGGCCTGCCGATGAATCCACAGCGAGATAAAGCAAGAGTTGAGGAGGGTCAAACAAACGCACAGCTGTGGGAAAAGCTGCCATTGAAGACTGTCATTTAGGGGGCGCTGCAGACAGGACACTGGTTGTTTTATTCATGACGAGGAGACAAAGAATCGGGTTTAGAAATCATGTTCTGTACTGTACAGTAAGGTTTCATTTTTTCGAATAAACCAGGAACGTAACGTGGTTTAAGCAGCTGACGAGCGTGTGAATGTGCACGACCAGGTAAAGTACCGTACTGCACGCTCAACTAATCTCAGCTAACCTCTTTTCACTGCCGTGTACCAAACACACGATAAAAATGGTTCCACGATGCACTTTTAATGTTATCTGCATTGCAAAGTAGCAGCATCCTGTGATGCTGTCAATATGGCAGGTACCATTTAGAAGCAAAATGCATTACGTTGCTGGAAGATTCAATCTGTGGCTTTCAGTGACAAGGGGgatctaataaaaacaaaaccccCAAATCTGTGATGAAATTACGTCTCCTCTGTACAAAGACTTCAAACGCCTTCAACAGCTTGTGACTGTTAATATATTATCCCAGCATGCTCTGGGAGAAAAGCTGGCTATAAGCAAACCAACATCATTTCATTACATCATTGCAGCTTATTGCGAAGCtagtttttttttgataaagaaATTATGAGTGATTTTTGTCCAtgcaaaaatcacattaaaatggCAGGATGTTGCTATGAAGTTGCTAAGGTATTCCGGTGGGTTTCTTACAAAAGTGTCCTTCCATCAGTGGAGATTTATGGGATTTTTACACCTGCCTGCTGAAAATCACAAGTCTATAGAGCAATAGCACACTTCTCTTCGGCAAACTAGATGATCTGAGGTATCACATCTGTGATGTAAGACAGGAATCCCTTAAAAGTGAGTTTCAAATGAGATAATGGGctaaaaaaacaggaaattatAAATCGGTTGTTCATTGGTCACAAGACATTTCATAATACTGTCAGCTGTGAAAGAATGTTTATGAGTTCAtgttgaaaatttgaaaatcgGTTGATAAACAACATGATATGAAGTAGTCAGAAGTCAAACGCAGTTCAAGTATGACACCAGCAACACTAAGATCAAGGGTTCGACTCCCAGGGAACACatactgataaaatgtaaactttagACGCACTGTAAAATGCactggataaaagcatctgccagatgaataaatgtaaatgtaaaaaatgttccATGTTGTTACCACACTGACTCACGATTGCATATTAAGCACCTGGCAGACTGTAATGAAAACGGCAACGGCAATCTTCACTATATGGTACATATTGCAACAGATATATTGCAGTTCAGTATGTCATGATATCAAAATGTGATTGACACCgcacaaaatatgtgtgtgaaCACAAAGCAGTTTCAGAGTTCAGATTTTAAGGGTTAGGTCATGAATTACTCACCCGCGCAAACTCACAAGACTTTCATTCATCTacggaacacaaaataaaatactttaacgAAATCTGAGAgatttctgaccctccataaacAGCGAGGGAACCAACATTTTCAAAGCCCCGAAAGAAtgtaaagacattgttaaaatagtccatgagACATGGATTAATGAAGGACCTACAGGTAGGTGGGTAATTAATGACGTGaatacgttttcatttttgggtgaacttccCCTTTAAGGCCTTGACACACCAAACCAAACTAGCAGCAGTGAAAGTTGACTGTTGTTGCCGTTTGGACCTAAAAGCAGCCAGCAGGTACATTCTGTGCCTACATGAGAGAAAGTGACCCCATGTATCAATAGTCTGTATTCGTCATTCAGAAAGGGAAACCAGAACTAAGACTGCATATATACAATCCATAAAGCCATTTCAGATATGAATCATGGTTTTCTTTAATTCCAGAGAATATTTAGTTATTGGATATTCAGTCTTGATTTCTTTGCTTGCAGTCATGCCTTTCGCTTTTTTTCTCATGCACTTGTTTGTTAAAGcgaacagccaatcagagctcaaCATGCTCAACAGGCCAAAAAGCCACCGACGGTGTCTAACTAGCGCCAATGGTGCTGAACACACACCGAAAAAACAATCAGATACGATGGCCCGATGTTTGGTGTGTCATGGCTTATATTCATTCATCCTGATTGAACTGTAGgaaatatgaacaaaacaaaagcacaaacgTATTGAAAAATTGTGGTATTGCAATcgaaaaaatagtattttaaggGAATAACGATGTTTTTGTTTGGACATTTTTAGCATGTCATCATTCGTCCGCAATTTTCCGAGTCAAAATCAGCTGAGGATTACTCATTTGAACGACGAAATGGTTGATAGCATGTGTGACGTTCAAATACGGTGACACATCGAGTGATGCAATCAAAACCAGATTCTCACGCCTCCTGTGTATGACCTCCCATGAGTCACAGCAAGTGTcggaaacaaaagaaaaaaaaaacaaggccgTCTGCTGGGCGGAGATGGGGAAAACTGTGGGCCGCGAATCAAGGTAGCTTGTTTTTCTCCCTCCCCTTTCAGTTCGCCGCACACCGCTTGTGTTCGACCCCGCGTCCTCCAGACTCACTTGTAGAGGAGCTGCAGTCGGCCGGGGTGGCAGTTGTTGCGGTTGATCTTGCCGTCTGGCTGGTAGAGGGTGGAGGAGTTGGAGAAGGTGGGAGGGAGGGAGTGGTTGTCGGAGGCAGGGAGGGGGTATCCTGGTGGCGGGAGGAGAGATTTGGGATCGTTCTGAGGAGTGGGGAGAGATGGAGAGCTGTGGTTCTGATTGGAGGAGGTGGGCCGTTTCCTGGAGCGCAGGGCCTGTCGCTCTGACAGCTGGTTTCTCAGCTCTGACACTCGTTCCTCTTTCTTCCTGGATGATCTTCTGCAGCTCTTTATTTTCCCTCTCCAGCTGGCGGGATTTCTCTTCATCGTTGTTGTTTGTGGATGAGCCGGTCTTCATGGTCTCCTGCTGGTCCGACTGCCACTCACCACGAGTGATAAGCCTCCGCA

Function

symbol description
gabbr1b Predicted to enable G protein-coupled GABA receptor activity. Acts upstream of or within behavioral response to nicotine. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of G protein-coupled receptor heterodimeric complex. Is expressed in central nervous system; eye; female organism; and male organism. Orthologous to human GABBR1 (gamma-aminobutyric acid type B receptor subunit 1).

NR:

description
PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193457 True 4608 TUCP 0.40 2 6519920 6526080

Neighbor

gene id symbol gene type direction distance location
tnfa LOC107694347 coding upstream 2558 6515100 ~ 6517362 (+)
nelfe nelfe,LOC107754803,LOC107584366,LOC107694353,LOC107677468,LOC107595590,LOC107711324 coding upstream 42770 6473609 ~ 6477150 (+)
LOC122323487 LOC107694355,LOC107754822,LOC107595588,LOC107711322 coding upstream 76792 6435232 ~ 6443128 (+)
gon4la LOC107754817,LOC107694363,LOC107584344 coding upstream 142321 6365518 ~ 6377599 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding upstream 158728 6346789 ~ 6361192 (+)
ddx39b ddx39b,LOC107584302,LOC107754831,LOC107694345,LOC107595593,LOC103042292,LOC108272881 coding downstream 123219 6649299 ~ 6659826 (+)
atat1 atat1,LOC107584296,LOC107694337,LOC107754836,LOC107711335,LOC107677465,LOC107595600 coding downstream 178760 6704840 ~ 6716985 (+)
c19h5orf49 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 coding downstream 241561 6767641 ~ 6769745 (+)
nsun2 nsun2,LOC107694333,LOC107691499,LOC107711338,LOC107595605 coding downstream 332989 6859069 ~ 6877006 (+)
irx4b irx4,LOC107754842,LOC107584360,LOC107691545,LOC107595627 coding downstream 507503 7033583 ~ 7038126 (+)
G131016 LOC107677454,LOC107595587,LOC107584310,LOC107694359,LOC107754821 non-coding upstream 110179 6405385 ~ 6409741 (+)
G131010 NA non-coding upstream 125963 6392916 ~ 6393957 (+)
G130950 NA non-coding upstream 185676 6331665 ~ 6334244 (+)
LOC122324219 NA non-coding upstream 255966 6255006 ~ 6263954 (+)
G130944 NA non-coding upstream 291833 6227746 ~ 6228087 (+)
G131093 LOC107694325,LOC107711328,LOC107754828,LOC107584304,LOC107677461,LOC107595615 non-coding downstream 112401 6638481 ~ 6639229 (+)
G131241 NA non-coding downstream 430489 6956569 ~ 6956786 (+)
G131245 NA non-coding downstream 450450 6976530 ~ 6976854 (+)
G131249 NA non-coding downstream 455870 6981950 ~ 6982175 (+)
G131252 NA non-coding downstream 487809 7013889 ~ 7014418 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other upstream 31160 6463083 ~ 6488760 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other upstream 118622 6371835 ~ 6401298 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 596947 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 767003 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 934265 5583505 ~ 5585655 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 165894 6691974 ~ 6696204 (+)
G131183 NA other downstream 307789 6833869 ~ 6836858 (+)
med10 med10,LOC107691542,LOC107595625,LOC107584362 other downstream 374555 6900635 ~ 6902398 (+)
lpcat1 lpcat1,LOC107584290,LOC107694330,LOC107754844,LOC107691501 other downstream 520533 7046613 ~ 7066858 (+)
LOC122323953 sox4a,LOC107584287,LOC107694328,LOC107754846,LOC107711341,LOC107691508 other downstream 708391 7234471 ~ 7257652 (+)

Expression


Co-expression Network