G131241


Basic Information

Item Value
gene id G131241
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6956569 ~ 6956786 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193784
GTGCTAGCTAGggacagagacacaaacacattgGTCTGTTGTGTTGTGAACATATCTTCTGTTGTGTGGGTGTGAAAGAGCAGCggagagggagagggaaagCACAAACCGAATGTTTGCAGGAGTGAATGTGAGATGTCCACACAGCAGTCAAACTCCATCACATCAGCCTGGGCTCCTCTGCAGTACAGGGCTAATTTGATACGAGCAATATTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193784 True 218 lncRNA 0.48 1 6956569 6956786

Neighbor

gene id symbol gene type direction distance location
nsun2 nsun2,LOC107694333,LOC107691499,LOC107711338,LOC107595605 coding upstream 79563 6859069 ~ 6877006 (+)
c19h5orf49 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 coding upstream 186824 6767641 ~ 6769745 (+)
atat1 atat1,LOC107584296,LOC107694337,LOC107754836,LOC107711335,LOC107677465,LOC107595600 coding upstream 239584 6704840 ~ 6716985 (+)
ddx39b ddx39b,LOC107584302,LOC107754831,LOC107694345,LOC107595593,LOC103042292,LOC108272881 coding upstream 296743 6649299 ~ 6659826 (+)
tnfa LOC107694347 coding upstream 439207 6515100 ~ 6517362 (+)
irx4b irx4,LOC107754842,LOC107584360,LOC107691545,LOC107595627 coding downstream 76797 7033583 ~ 7038126 (+)
mrpl36 mrpl36 coding downstream 86653 7043439 ~ 7044961 (+)
LOC122323892 vars2,LOC107584340 coding downstream 399310 7356096 ~ 7376316 (+)
LOC122323846 adcy3,adcy3a,LOC107703925,LOC107688975 coding downstream 420968 7377754 ~ 7395725 (+)
maco1a tmem57a,LOC107584286,LOC107687072,LOC107745723,LOC107709293,LOC107691503 coding downstream 624460 7581246 ~ 7590155 (+)
G131093 LOC107694325,LOC107711328,LOC107754828,LOC107584304,LOC107677461,LOC107595615 non-coding upstream 317340 6638481 ~ 6639229 (+)
G131016 LOC107677454,LOC107595587,LOC107584310,LOC107694359,LOC107754821 non-coding upstream 546828 6405385 ~ 6409741 (+)
G131010 NA non-coding upstream 562612 6392916 ~ 6393957 (+)
G130950 NA non-coding upstream 622325 6331665 ~ 6334244 (+)
LOC122324219 NA non-coding upstream 692615 6255006 ~ 6263954 (+)
G131245 NA non-coding downstream 19744 6976530 ~ 6976854 (+)
G131249 NA non-coding downstream 25164 6981950 ~ 6982175 (+)
G131252 NA non-coding downstream 57103 7013889 ~ 7014418 (+)
G131256 NA non-coding downstream 75475 7032261 ~ 7032591 (+)
G131272 NA non-coding downstream 259232 7216018 ~ 7217504 (+)
med10 med10,LOC107691542,LOC107595625,LOC107584362 other upstream 54171 6900635 ~ 6902398 (+)
G131183 NA other upstream 119711 6833869 ~ 6836858 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 260365 6691974 ~ 6696204 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other upstream 430489 6519920 ~ 6526080 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other upstream 467809 6463083 ~ 6488760 (+)
lpcat1 lpcat1,LOC107584290,LOC107694330,LOC107754844,LOC107691501 other downstream 89827 7046613 ~ 7066858 (+)
LOC122323953 sox4a,LOC107584287,LOC107694328,LOC107754846,LOC107711341,LOC107691508 other downstream 277685 7234471 ~ 7257652 (+)
LOC122323847 tmem57a,tmem57,LOC107584286,LOC107745723,LOC107687072 other downstream 494264 7451050 ~ 7454765 (+)
ldlrap1a ldlrap1a,LOC107709294,LOC107691509,LOC107562879,LOC107687073,LOC107745728 other downstream 634728 7591514 ~ 7605226 (+)
G131351 NA other downstream 652154 7608940 ~ 7615288 (+)

Expression


Co-expression Network