G131296


Basic Information

Item Value
gene id G131296
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 7206189 ~ 7254556 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193857
ACCTTtaacatttctcacattatgaAAGTTTATTTTCAACAGTTTAGAAGATATGACAAGAGCTCAGAATTAAACTGTCAGCATGAATTAATCTTGATAATATCAGATAACTTTGGTAGAAAGGTATGTAACAGATTACAGTCAACCTAAAATGATTCAGACAACTGTTAGTATGAGATTAAGATGTTCCATCACCTCCCAGATATGCTCAGTCGGGGTTAGATCTGGACTTTGCGGTGGCCAGAGcttttttgcattgtgtttGGTTCCATTATCATGCTAAAATATGAAACGACGGCCCATGAGCTTCCTGGCTGACGGCAGCATCTGACTCTGGAGAACTTCCACTCACAGTTCATAGTTCCATCAATGAAATGTAGTTTGCCTAGTCCACTAGCTGCCCTACACCCCCACAGCATAACATTGCCCCCTCCATTATTTACAGTAGGAGTAAGACACTGGGGCTTCAAGGCTTCTCCTTTGGTCCTCCACACATTTACTCTCATCACTCCAAAGGACTGACTTCCGAAATTCTGTAGACTTATCGATATGTTCTTCAGCAAACTGGAGGAGGCGTCGTCTTTGATTTCGAGGGTGTCTTCTGGGGCATTCTTCTGGGGTCATTCAGCCTGTTGCGAATGGTTTGAGCACACAGTTCTGTGTCAGTGGCCTTTTTGACTTCAGCAGCAATTTTTTTAGCAGaaatctttctgtttttcttcgCTAACTGTTTAATAAGTCTGTCTGTTCTGGCTGtcgtctttttctttcttccacgGCCAGGCAAATTCTTCACCTCGCCAGTCTCTCTGAATTTCTTTACAATGGAAAAGACCGTCCCTTTAGGCATATCTAATCTTTTAGCTATATTTCTAATTGAAAAGCCCTGCTTGTTGAATTTAACTACCTTTATTCTCAAATCAGTTGATCTTTCATTGGTTTTAGCCATCCTTGTGTTAGACTGTGTCGAAAATAAATTGGTTGACCTACATAAGTTAGGTATTTCTTGGTCCCAAATCcacaataaaacactttttaggCATAATAAGTCacagtttgctttattttgctaTCTTCACTTATTGTCCTGCACCCACTATACTGTATGTCTGgtgtctgaataatttttggtttgactgtatGCTACTTGGAGAGACATTATGAATTTATGCCTTCACATACTTCTCcatggacagaaaaaaaacaaaggtttcCTTTCTCCGTCCAAAACCCTGTCTTCCCCCATGACTTGTGGCACACTGGAGCAGGATTTTCTTACtgaaacaaagaagaaaaatgcttgaatatgaaaaatgcaGTCTGTCGTCCCATGTGCTGTAGCCTCTAGTaccatttttaaacaacaataataaacaaatgtctTGGATATGGTATGCAGCAATACATCACTCAGACAGTAATTGAACACGCTATGTATTACTTACATGTAAGTTAACAACACGGGGTGTAGTTCGGTGGGTGTcagtatgtgtttatatgcagAGTCATTACGGGTGACTTATGCGTTGCTTGTGCAAGCAGAACTCGTGttgtagaaaacattttgtCCTTCTCTCTGTTGATGGAGAGCAGGGAGGAAGTTTGGCCCTGAAGGTCCCTTCATTCTGCTCCAGTAGCGCTGCATGGGCTTCATGTACTGAGTGGTAAGATCAAGCAGAAGAGACTGCTTTTGAGTTAGGTTTGATCGTGGATCACCTCTGGGCAGATCAACACATAAACAACAACCAGTGAGAAAGGCCCCGCACTTCGACTGCAGCAtcgctctttctcttttccacTGGTTAGGTAGCTCTCCCAGTCTCTAGTATTGCGGGGTTTGTATAAATACTCAAAGTGTGAAAGAGAAGTGACATTTTCAAAGCGAACAGGTGCCGATCGTGGCCTTTCATCGCTTGTCTGTTCTCGGGAAGCTTTGAAGGCTTTCAGATTTATTGACTTTGCTCTCCGTCCCGGTTTGTACATGTTGTTCTTACGGTTTTGGAGTTTTTCCATCAGTCTGGTGTAGTGTTTATTCGTGCGCTGCAGGCCACCGGTGGAACACAATAACACGCAGCGCATCCTAGCGTGGGAGCAGCCAGTAACTGTTAGGCTAGACGACTGACTAATACCTACGTCTCATTATGGACTTGTTGTGTAAGCCGTGCAACGTGGTGCGAGGTCGTCCGAGAGCTCGGTCATGCGCTTCCATCCGCAAACATGGGCACTCAACTGACCCCGCGGAGAATATTTAATGCTTGTAAGAATAGCAGTGTGCTGATATGGATAAAAACGAGGCGGTCCAGTTGATTTTGAGGGTAAGGAAGAATTCGACTGTCCTCAGTTAAAGGGCAAGAGTTGGAACATGAACAtacttgtgaaaaagaagtgcattTTAGTATACCTATTATGGATTTAATCGGtggtAGTGCTGATA

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU193857 True 2434 lncRNA 0.42 2 7206189 7254556

Neighbor

gene id symbol gene type direction distance location
ndufs6 ndufs6,LOC107754843,LOC107711315,LOC106570329 coding downstream 162843 7042113 ~ 7043346 (-)
irx1b irx1,irx1b,LOC107754808,LOC107584361,LOC107711312,LOC107691543,LOC107595626 coding downstream 224763 6977815 ~ 6981426 (-)
ube2ql1 ube2ql1,LOC107711339,LOC107754840,LOC107691500 coding downstream 306384 6889271 ~ 6899805 (-)
tent4a papd7,LOC107694334,LOC107691498 coding downstream 356501 6834886 ~ 6849688 (-)
adcy2b adcy2b,adcy2,LOC107694336,LOC107691497,LOC107595616,LOC107711297 coding downstream 384868 6769871 ~ 6821321 (-)
e2f3 e2f3,LOC107687070,LOC107745724,LOC107691507,LOC107562874,LOC107709295,LOC107584335 coding upstream 313987 7568543 ~ 7575504 (-)
LOC122323247 LOC107687071 coding upstream 321624 7576180 ~ 7581234 (-)
fndc5b fndc5b,LOC107584283,LOC107687074,LOC107691512,LOC107709291,LOC107562878,LOC108433842,LOC108238726 coding upstream 357431 7611987 ~ 7630756 (-)
eif3i eif3i,LOC107687089,LOC107745717,LOC107709286,LOC107691510 coding upstream 519409 7773965 ~ 7777114 (-)
txlna txlna,LOC107709285,LOC107691504,LOC107687085,LOC107562872 coding upstream 522917 7777473 ~ 7784225 (-)
G131265 mrpl36 non-coding downstream 161227 7043507 ~ 7044962 (-)
LOC122324041 NA non-coding downstream 320746 6883962 ~ 6885443 (-)
G131166 NA non-coding downstream 445741 6760174 ~ 6760448 (-)
G131165 NA non-coding downstream 450754 6754414 ~ 6755435 (-)
LOC122324261 NA non-coding downstream 502252 6703871 ~ 6703937 (-)
G131305 NA non-coding upstream 5739 7260295 ~ 7262610 (-)
G131318 NA non-coding upstream 99588 7354144 ~ 7355700 (-)
G131363 NA non-coding upstream 313392 7567948 ~ 7590147 (-)
G131411 NA non-coding upstream 695233 7949789 ~ 7950001 (-)
G131413 NA non-coding upstream 732964 7987520 ~ 7988325 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other downstream 347529 6850369 ~ 6858660 (-)
polr1h znrd1,LOC107584303,LOC107754832,LOC107677479,LOC107694346,LOC107595594 other downstream 556800 6648390 ~ 6649389 (-)
sh3bp5lb sh3bp5lb,LOC107711328,LOC107677461,LOC107694325,LOC107754828,LOC107584304,LOC108435520 other downstream 566969 6627598 ~ 6639220 (-)
G131006 LOC107754818,LOC107731580 other downstream 843017 6362347 ~ 6363172 (-)
LOC122324254 NA other downstream 1800553 5404516 ~ 5405636 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 102065 7356621 ~ 7360143 (-)
LOC122324169 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 other upstream 140624 7395180 ~ 7397946 (-)
LOC122323248 LOC107687071 other upstream 191202 7445758 ~ 7451916 (-)
G131373 NA other upstream 347577 7602133 ~ 7605143 (-)
khdrbs1b LOC107745714,LOC107691518,LOC107584277,LOC107687088,LOC107709277,LOC107562753 other upstream 864393 8118949 ~ 8129270 (-)

Expression


Co-expression Network