LOC122323847 (tmem57a,tmem57,LOC107584286,LOC107745723,LOC107687072)


Basic Information

Item Value
gene id LOC122323847
gene name tmem57a,tmem57,LOC107584286,LOC107745723,LOC107687072
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 7451050 ~ 7454765 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU193952
GTGCAAGGCAAAAACTGACAGTCCCGCATTCGCGTAGCGATGCGCATCAGTATTAGGACGGCCACGTAGTTTCCCCTCGAGTGTTCAAAGTTACAGGAATCTAAAGGGTGGAGAATGAAGCGGCGCAATGCGGATTGCAGCAAACTCCGTCGCCCGTTGAAACGGAACCGAATCACCGAGGGTATTCACAGCAGTACCTTCCTGTATCTGAAGTTCCTGGTCGTTTGGGCGCTGGTTCTGCTGGCTGACTTTGTGCTGGAGTTCAGGTTCGAGTACCTGTGGCCTTTCTGGCTTTTCATCAGGAGCGTGTACGATTCCTTTAGATATCAGGGACTGGCGTTCTCTgtgttctttgtgtgtgtcGCATTCACATCAGACATCATCTGCCTCCTGTTCATCCCCAAGCAATGGCTGTTCTTCGCCGCCAGCACGTATGTCTGGGTACAGTACGTGTGGCATACAGAGCGAGGTGTGTGTCTGCCGACCGTCTCTCTCTGGATTCTCTTCGTCTACATCGAAGCAGCCATCCGATTCAAGgatttgaaacattttcatgTAGACCTTTGCCGTCCATTCGCTGCTCACTGCATTGGTTATCCCGTGGTGACGCTGGGCTTCGGATTCAAGAGTTATGTCAGCTATAAGATGCGTCTGCGCAAACAAAAGGAGGTGCAGAAGGAAAATGAGTTCTACATGCAGCTCCTGCAGCAAGCCCTGCCTCCAGAACAACAGATGCTTCAGAGACAGGAACGAGAGACAG
>XM_043217949.1
CGGCCACGTAGTTTCCCCTCGAGTGTTCAAAGTTACAGGAATCTAAAGGGTGGAGAATGAAGCGGCGCAATGCGGATTGCAGCAAACTCCGTCGCCCGTTGAAACGGAACCGAATCACCGAGGGTATTCACAGCAGTACCTTCCTGTATCTGAAGTTCCTGGTCGTTTGGGCGCTGGTTCTGCTGGCTGACTTTGTGCTGGAGTTCAGGTTCGAGTACCTGTGGCCTTTCTGGCTTTTCATCAGGAGCGTGTACGATTCCTTTAGATATCAGGGACTGGCGTTCTCTgtgttctttgtgtgtgtcGCATTCACATCAGACATCATCTGCCTCCTGTTCATCCCCAAGCAATGGCTGTTCTTCGCCGCCAGCACGTATGTCTGGGTACAGTACGTGTGGCATACAGAGCGAGGTGTGTGTCTGCCGACCGTCTCTCTCTGGATTCTCTTCGTCTACATCGAAGCAGCCATCCGATTCAAGgatttgaaacattttcatgTAGACCTTTGCCGTCCATTCGCTGCTCACTGCATTGGTTATCCCGTGGTGACGCTGGGCTTCGGATTCAAGAGTTATGTCAGCTATAAGATGCGTCTGCGCAAACAAAAGGAGGTGCAGAAGGAAAATGAGTTCTACATGCAGCTCCTGCAGCAAGCCCTGCCTCCAGAACAACAGATGCTTCAGAGACAGGAACGAGAGACAGAGGAGGGTAAGATCACCATTTGA

Function

NR:

description
macoilin-1

GO:

id name namespace
GO:0030424 axon cellular_component
GO:0031965 nuclear membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193952 True 760 TUCP 0.51 5 7451050 7454742
XM_043217949.1 False 725 mRNA 0.51 5 7451108 7454765

Neighbor

gene id symbol gene type direction distance location
LOC122323846 adcy3,adcy3a,LOC107703925,LOC107688975 coding upstream 55325 7377754 ~ 7395725 (+)
LOC122323892 vars2,LOC107584340 coding upstream 74734 7356096 ~ 7376316 (+)
mrpl36 mrpl36 coding upstream 406089 7043439 ~ 7044961 (+)
irx4b irx4,LOC107754842,LOC107584360,LOC107691545,LOC107595627 coding upstream 412924 7033583 ~ 7038126 (+)
nsun2 nsun2,LOC107694333,LOC107691499,LOC107711338,LOC107595605 coding upstream 574044 6859069 ~ 6877006 (+)
maco1a tmem57a,LOC107584286,LOC107687072,LOC107745723,LOC107709293,LOC107691503 coding downstream 126481 7581246 ~ 7590155 (+)
marcksl1b marcksl1,marcksl1b,LOC107745720,LOC107691511,LOC107584334 coding downstream 306891 7761656 ~ 7764418 (+)
hdac1 hdac1,LOC107562876,LOC107745719,LOC107584281,LOC108272688 coding downstream 313558 7768323 ~ 7773781 (+)
tspan13b tspan13b,LOC107691547,LOC107584356,LOC107562755,LOC107687093,LOC108273354,LOC108433833 coding downstream 684929 8139694 ~ 8145071 (+)
mrps18b LOC107745713,LOC107687091,LOC107691521,LOC107584330 coding downstream 708205 8162970 ~ 8164866 (+)
G131339 e2f3,LOC107687070,LOC107745724,LOC107709295,LOC107691507,LOC107584335,LOC107562874 non-coding upstream 5970 7444602 ~ 7445080 (+)
LOC122323469 adcy2a,LOC107551198,LOC107664610,LOC100707801,LOC107574671,LOC102200234 non-coding upstream 7586 7428544 ~ 7443464 (+)
LOC122324170 NA non-coding upstream 63070 7384451 ~ 7387980 (+)
G131272 NA non-coding upstream 233546 7216018 ~ 7217504 (+)
G131256 NA non-coding upstream 418459 7032261 ~ 7032591 (+)
G131414 NA non-coding downstream 589751 8044516 ~ 8123838 (+)
G131420 NA non-coding downstream 641630 8096395 ~ 8145849 (+)
G131439 NA non-coding downstream 716492 8171257 ~ 8173047 (+)
G131442 NA non-coding downstream 728913 8183678 ~ 8184642 (+)
G131485 myclb,LOC107584272,LOC107709270,LOC107691528,LOC107687096,LOC107562763,LOC107724275 non-coding downstream 841993 8296758 ~ 8324739 (+)
LOC122323953 sox4a,LOC107584287,LOC107694328,LOC107754846,LOC107711341,LOC107691508 other upstream 193398 7234471 ~ 7257652 (+)
lpcat1 lpcat1,LOC107584290,LOC107694330,LOC107754844,LOC107691501 other upstream 384192 7046613 ~ 7066858 (+)
med10 med10,LOC107691542,LOC107595625,LOC107584362 other upstream 548652 6900635 ~ 6902398 (+)
G131183 NA other upstream 614192 6833869 ~ 6836858 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other upstream 754846 6691974 ~ 6696204 (+)
ldlrap1a ldlrap1a,LOC107709294,LOC107691509,LOC107562879,LOC107687073,LOC107745728 other downstream 136749 7591514 ~ 7605226 (+)
G131351 NA other downstream 154175 7608940 ~ 7615288 (+)
si:ch73-130a3.4 LOC107736638,LOC107584280,LOC107687100,LOC107584333 other downstream 329991 7784756 ~ 7786559 (+)
yars1 yars,LOC107687080,LOC107691530,LOC107724337,LOC107709269 other downstream 915941 8370706 ~ 8375867 (+)
LOC122323856 LOC107745707,LOC107709282,LOC107691523 other downstream 1705605 9160370 ~ 9166094 (+)

Expression


Co-expression Network