LOC122323519


Basic Information

Item Value
gene id LOC122323519
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 7996087 ~ 7997257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU194130
ATCACATCAAGTCCTTTTGCAGTTGTATCCGTCAAagaaatacacatacaaaatgGAAATGACTTTCAAATTGCAGAGCTTGGACAAAGTTagCACACAGGTTTTGAAGAGGAATTCATCAAGGACATAGTCTCAGGCTCAAGACGTCACACACAAGTGCAAACAGTTCAGTCGCCGTATTGGTTGAATTATATAGGATTTCCAGGA
>XR_006247019.1
CCGTACCATGCAGTGAAAGCGCCTTTTAGAGAACATTCAAACGGAGCGCGAGATCAACGGACAAGTAACGAATGAACATCAGCACATGGTTCAACAATCTTGAGGATGGATCACATCAAGTCCTTTTGCAGTTGTATCCGTCAAagaaatacacatacaaaatgGAAATGACTTTCAAATTGCAGAGCTTGGACAAAGTTagCACACAGGTTTTGAAGAGGAATTCATCAAGGACATAGTCTCAGGCTCAAGACGTCACACACAAGTGCAAACAGTTCAGTCGCCGTATTGGTTGAATTATATAGGATTTCCAGGAGACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194130 False 207 lncRNA 0.40 2 7996092 7996394
XR_006247019.1 True 321 lncRNA 0.42 3 7996087 7997257

Neighbor

gene id symbol gene type direction distance location
kpna6 kpna6,LOC107584279,LOC107745716,LOC107562870 coding downstream 194366 7786886 ~ 7801721 (-)
txlna txlna,LOC107709285,LOC107691504,LOC107687085,LOC107562872 coding downstream 211862 7777473 ~ 7784225 (-)
eif3i eif3i,LOC107687089,LOC107745717,LOC107709286,LOC107691510 coding downstream 218973 7773965 ~ 7777114 (-)
fndc5b fndc5b,LOC107584283,LOC107687074,LOC107691512,LOC107709291,LOC107562878,LOC108433842,LOC108238726 coding downstream 365331 7611987 ~ 7630756 (-)
LOC122323247 LOC107687071 coding downstream 414853 7576180 ~ 7581234 (-)
agr2 agr2,LOC107584355,LOC107687097,LOC107745729,LOC107562756,LOC107709281,LOC107691548 coding upstream 148379 8145636 ~ 8147485 (-)
ppp1r10 ppp1r10,LOC107709274,LOC107691520,LOC107745712,LOC107687078 coding upstream 153702 8150959 ~ 8162163 (-)
abcf1 abcf1,LOC107745711,LOC107687077,LOC107709273 coding upstream 167611 8164868 ~ 8174472 (-)
bag6l LOC107687076,LOC107691523,LOC107745707,LOC107709282 coding upstream 184763 8182020 ~ 8195819 (-)
hpcal4 hpcal4,LOC107562761,LOC107687092,LOC107691524,LOC102228321,LOC107745708 coding upstream 200454 8197711 ~ 8215983 (-)
G131413 NA non-coding downstream 7762 7987520 ~ 7988325 (-)
G131411 NA non-coding downstream 46086 7949789 ~ 7950001 (-)
G131363 NA non-coding downstream 405940 7567948 ~ 7590147 (-)
G131318 NA non-coding downstream 640387 7354144 ~ 7355700 (-)
G131305 NA non-coding downstream 733477 7260295 ~ 7262610 (-)
LOC122324217 NA non-coding upstream 49019 8046276 ~ 8046879 (-)
LOC122324233 NA non-coding upstream 80843 8078100 ~ 8083896 (-)
LOC122323284 NA non-coding upstream 145674 8142931 ~ 8144195 (-)
G131464 NA non-coding upstream 178126 8175383 ~ 8176840 (-)
G131495 NA non-coding upstream 227562 8224819 ~ 8272803 (-)
G131373 NA other downstream 390944 7602133 ~ 7605143 (-)
LOC122323248 LOC107687071 other downstream 544171 7445758 ~ 7451916 (-)
LOC122324169 si:dkeyp-46h3.1,LOC107694323,LOC107584363,LOC107691540,LOC107754838 other downstream 598141 7395180 ~ 7397946 (-)
LOC122323893 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 635944 7356621 ~ 7360143 (-)
srd5a1 srd5a1,LOC107691541,LOC107711310,LOC107595623,LOC107694335 other downstream 1137427 6850369 ~ 6858660 (-)
khdrbs1b LOC107745714,LOC107691518,LOC107584277,LOC107687088,LOC107709277,LOC107562753 other upstream 121692 8118949 ~ 8129270 (-)
trit1 trit1,LOC107691527,LOC107687082,LOC107709271,LOC107562762,LOC107724344 other upstream 289888 8287145 ~ 8320901 (-)
tdp2b tdp2,LOC107743833,LOC107696206,LOC107555562 other upstream 657241 8654498 ~ 8659486 (-)
hey1 hey1,LOC107584259,LOC107702120,LOC107555572,LOC107696214 other upstream 727249 8724506 ~ 8786729 (-)
si:dkeyp-120h9.1 si:dkeyp-120h9.1,LOC107702119,LOC107584261,LOC107724282,LOC107743828,LOC107696212,LOC107555569 other upstream 730002 8727259 ~ 8738786 (-)

Expression


Co-expression Network