XLOC_006753 (tmem234)


Basic Information

Item Value
gene id XLOC_006753
gene name tmem234
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 33314673 ~ 33317398 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013004
AGTCTGTTTTTATGGTAATATAGATATCAGCAGAACTGCGGTTCGACAAcggaagtagttttttttttttacatgcggAAGAAACGAAAACATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCAATCTTGTGGGGAGGCACAAACCCGTTCCTTAAAAAAGGCACAGAGGGCATTGAGGAAGTTCAGAAGAAAAACAAACTCCTCCAGTTTCTAGCTGAGCTCAAATTTCTCTTTCTCAACTTCAagtatttagTGCCATTCCTGTTGAACCAAAGTGGATCATTAGTGTTTTACTTCACACTCGCTTCTACAGATCTGTCTTTGGCAGTGCCTGTGGTCAACTCCCTCACATTTCTGTTTACATTGCTGATGGGTAAAGTGCTTGGAGAAGAGTTTGGAGGAAAAGGGGCCATAATGGGTATGTTACTCATCATGTGTGGGGTGACGGTGTGTGTCCTGAGTTCTGTCTCTGAGACGCACGGCATTGGAGCCCGAAACATAAGTGAGACCTAAAATATGGACTGAAAGGTAAACGTGGAGAAAGTTTTATCTGCATCAGCCACATCAATGTTTGAAGGTAGTAAGATTATGTGCTGCTTCATTTTCAGTATGTGCCATGACTGGAGGACTTTATATTTGTACTTGAACTATCTTGGTGAAATCCAAATGTTTTGCACTTTATGTGGATTGTGGAGCATACGAAGATAAATGTGTGTATAATATTATTAActgacatttttaatatatttgtattaataatgTGAAAGTGGTCTGTGTTGGATACTTTTATTTGAATTGTCTTTTACAATCAGATGTCATATTTTTTGAAACGGAAGGAATAAAAATGATAAGAAGC
>TCONS_00013005
cggAAGAAACGAAAACATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCAATCTTGTGGGGAGGCACAAACCCGTTCCTTAAAAAAGGCACAGAGGGCATTGAGGAAGTTCAGAAGAAAAACAAACTCCTCCAGTTTCTAGCTGAGCTCAAATTTCTCTTTCTCAACTTCAagtatttagTGCCATTCCTGTTGAACCAAAGTGGATCATTAGTGTTTTACTTCACACTCGCTTCTACAGATCTGTCTTTGGCAGTGCCTGTGGTCAACTCCCTCACATTTCTGTTTACATTGCTGATGGGTAAAGTGCTTGGAGAAGAGTTTGGAGGAAAAGGGGCCATAATGGGTATGTTACTCATCATGTGTGGGGTGACGGTGTGTGTCCTGAGTTCTGTCTCTGAGACGCACGGCATTGGAGCCCGAAACATAAGTGAGACCTAAAATATGGACTGAAAGTATGTGCCATGACTGGAGGACTTTATATTTGTACTTGAACTATCTTGGTGAAATCCAAATGTTTTGCACTTTATGTGGATTGTGGAGCATACGAAGATAAATGTGTGTATAATATTATTAActgacatttttaatatatttgtattaataatgTGAAAGTGGTCTGTGTTGGATACTTTTATTTGAATTGTCTTTTACAATCAGATGTCATATTTTTTGAAACGGAAGGAATAAAAATGATAAGAA
>TCONS_00013006
atgcggAAGAAACGAAAACATGGTGTCAACAAGTAAGGCTGTTATTCATTTGTGGTTTTGAAGAGTTTAGTAAATGAAAGTATCGCCTTGGAATGTATGAATAACAGATTGATTCATTCCTATttgtacaaattaataatttgtcatTTGTTGACTTACAATCAAACATGTTAATTTCAGACCAGTGCAAGTGTCTGTCTTAATAAATGTTTCGTCCAGGTGAAGTGTTTTGTCTGTTGTTGGTCGCAATCTTGTGGGGAGGCACAAACCCGTTCCTTAAAAAAGGCACAGAGGGCATTGAGGAAGTTCAGAAGAAAAACAAACTCCTCCAGTTTCTAGCTGAGCTCAAATTTCTCTTTCTCAACTTCAagtatttagTGCCATTCCTGTTGAACCAAAGTGGATCATTAGTGTTTTACTTCACACTCGCTTCTACAGATCTGTCTTTGGCAGTGCCTGTGGTCAACTCCCTCACATTTCTGTTTACATTGCTGATGGGTAAAGTGCTTGGAGAAGAGTTTGGAGGAAAAGGGGCCATAATGGGTATGTTACTCATCATGTGTGGGGTGACGGTGTGTGTCCTGAGTTCTGTCTCTGAGACGCACGGCATTGGAGCCCGAAACATAAGTGAGACCTAAAATATGGACTGAAAGGTAAACGTGGAGAAAGTTTTATCTGCATCAGCCACATCAATGTTTGAAGGTAGTAAGATTATGTGCTGCTTCATTTTCAGTATGTGCCATGACTGGAGGACTTTATATTTGTACTTGAACTATCTTGGTGAAATCCAAATGTTTTGCACTTTAT

Function

symbol description
tmem234 Acts upstream of or within glomerular filtration and pronephric glomerulus development. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM234 (transmembrane protein 234).

GO:

id name namespace
GO:0003094 glomerular filtration biological_process
GO:0039021 pronephric glomerulus development biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-326 Acts upstream of or within glomerular filtration and pronephric glomerulus development. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM234 (transmembrane protein 234).

Ensembl:

ensembl_id ENSDARG00000078333

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013004 False 866 mRNA 0.38 5 33314673 33317398
TCONS_00013005 False 709 mRNA 0.39 6 33314675 33317323
TCONS_00013006 True 807 mRNA 0.40 4 33314847 33317326

Neighbor

gene id symbol gene type direction distance location
XLOC_006752 NA coding downstream 13503 33261131 ~ 33301170 (-)
XLOC_006751 nusap1 coding downstream 58006 33251721 ~ 33256667 (-)
XLOC_006750 rtf1 coding downstream 68519 33229446 ~ 33246154 (-)
XLOC_006749 golga5 coding downstream 87262 33211014 ~ 33227411 (-)
XLOC_006748 fbln5 coding downstream 107249 33155428 ~ 33207424 (-)
XLOC_006754 si:dkey-71p21.13 coding upstream 2665 33320063 ~ 33321541 (-)
XLOC_006755 zgc:172120 coding upstream 25057 33342455 ~ 33362191 (-)
XLOC_006756 btbd6a coding upstream 76718 33394116 ~ 33398735 (-)
XLOC_006757 NA coding upstream 135040 33452438 ~ 33463644 (-)
XLOC_006758 NA coding upstream 140125 33457523 ~ 33459318 (-)
XLOC_006471 BX537274.2 misc downstream 23049768 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 32488448 825904 ~ 826225 (-)
XLOC_006741 NA non-coding downstream 318177 32946711 ~ 32996496 (-)
XLOC_006738 CU019663.1 non-coding downstream 507032 32793864 ~ 32807641 (-)
XLOC_006731 NA non-coding downstream 747417 32457931 ~ 32567256 (-)
XLOC_006732 NA non-coding downstream 819801 32492067 ~ 32494872 (-)
XLOC_006768 BX649403.1 non-coding upstream 1321231 34638629 ~ 34638746 (-)
XLOC_006769 BX649403.2 non-coding upstream 1326752 34644150 ~ 34644281 (-)
XLOC_006773 CR932983.2 non-coding upstream 1865596 35182994 ~ 35194759 (-)

Expression


Co-expression Network