G132227


Basic Information

Item Value
gene id G132227
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 11394557 ~ 11394949 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195244
AGGCGCTCGCCCCGCCGCTAGAGAAGCGAGTCGTGGGACCAcgtagtccaggcgacgacCCCCGTATAGTCCAGGCGACGACCGCGCCCGTgtacggctgacgggccaggatgccgagctgTTGATCCCCttaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcggccgccggactccgccccttacctggaccctgccccctggaacactacctgaccttgcacttcccctgcagcacaaTGAGAGCACcagttcccccttttatttggacactttctccctggacactttattttgtatttgttattttgtcaataaaaagcctctccgag

Function

GO:

id name namespace
GO:0006366 transcription by RNA polymerase II biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195244 True 393 lncRNA 0.61 1 11394557 11394949

Neighbor

gene id symbol gene type direction distance location
LOC122323863 NA coding upstream 273556 11119263 ~ 11121001 (+)
angpt2b angpt2b,LOC107663733,LOC107724362,LOC107564496,LOC107698979,LOC107710743,LOC107565051 coding upstream 610399 10763151 ~ 10784158 (+)
wdyhv1 wdyhv1,LOC107653860 coding upstream 980795 10412271 ~ 10413762 (+)
ccn4a wisp1a,LOC107724346,LOC107670277,LOC107574716,LOC107556407 coding upstream 1001599 10388363 ~ 10392958 (+)
abitram fam206a,LOC107670282,LOC107556369,LOC107710376,LOC107556344 coding upstream 1080464 10312162 ~ 10314093 (+)
LOC122323768 LOC107726138,LOC107664713,LOC107563276,LOC107555946,LOC107698981 coding downstream 112323 11507272 ~ 11510522 (+)
LOC122323771 NA coding downstream 116394 11511343 ~ 11513891 (+)
LOC122323767 pef1,LOC107664714,LOC107726139,LOC107712637,LOC107698987 coding downstream 120579 11515528 ~ 11521236 (+)
LOC122323870 ctnnal1,LOC107670281,LOC107724361,LOC107653856,LOC107710384 coding downstream 141014 11535963 ~ 11582937 (+)
LOC122323759 LOC107660582,LOC107714390,LOC107657518,LOC107584150 coding downstream 369925 11764874 ~ 11772074 (+)
LOC122323901 NA non-coding upstream 315619 11076694 ~ 11078938 (+)
G132180 NA non-coding upstream 513982 10875871 ~ 10880575 (+)
G132081 NA non-coding upstream 696721 10632648 ~ 10697836 (+)
G132082 NA non-coding upstream 755858 10637441 ~ 10638699 (+)
G131987 rnf19b,ak2,LOC107710473,LOC107653815,LOC107670272,LOC107724316,LOC107564491,LOC107556415,LOC107556372,LOC107670285,LOC107710539,LOC107724312 non-coding upstream 793090 10582750 ~ 10601467 (+)
G132266 NA non-coding downstream 312063 11707012 ~ 11707249 (+)
G132267 fam206a,LOC107556369,LOC107670282,LOC107710376,LOC107556344 non-coding downstream 312572 11707521 ~ 11708463 (+)
G132269 NA non-coding downstream 314021 11708970 ~ 11709872 (+)
G132291 NA non-coding downstream 437224 11832173 ~ 11832908 (+)
G132298 NA non-coding downstream 665088 12060037 ~ 12060379 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 976461 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 1641001 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 1755596 9636973 ~ 9638961 (+)
si:ch211-215i13.3 LOC107579802,LOC107724304,LOC107702091 other upstream 1856055 9536318 ~ 9538502 (+)
LOC122323856 LOC107745707,LOC107709282,LOC107691523 other upstream 2228463 9160370 ~ 9166094 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other downstream 127280 11522229 ~ 11523881 (+)
LOC122323774 NA other downstream 716330 12111279 ~ 12112897 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 1028341 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 1626468 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 1914478 13309427 ~ 13336749 (+)

Expression


Co-expression Network