G132355


Basic Information

Item Value
gene id G132355
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12178945 ~ 12181367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195451
attttttcatttaggtAGACAAAATTTTTGGGAACAGAATAAAGAGgattctaaaaaaatgtatggaaagGGTGCTTAAAATTTCTGATAAAGgcaattataatgttaaaaaacttCAGATAAATAGTGTTCATATCGATATTGGAATTATATTGTATCGAccaaaattaagaaatgtattgTGATTTTAGTCATATTGTCCAGTCcttatgttaatataaaaaataattctgactaaaaagatgaggatgaggaaggGTACAGAGTAAATGTACCGGAAGTGGAAGCCCCACAGACTGTGGAATGTATTGAGCGTAGAGATGCATGGGAACTGGCACATACACTGGCACTGGCACAGGCAGCACTATCACTTTAGGACTTCCATCTGCaggCTATTTGTGTGTCAGCATCGCAGGTGTGAGGTTTACAGGATGTGGCTTTGTTTTTGCTTATGGATTTATATGGCAAGTCCTTGTCTTTCTGTGTTTGGGATGAAGAGACGGGAGCTTTCACGGCAGACTTCTGCAAGCAGAGCAAAGAACAAGAGATCTGTTTAATCGCTAACCAGACTGATTCAAACAAGCACTCAAAGCTCAAAAGTGACAAATTAGACTTTTTGAATCCCACTTTCGCTCTTGATAAGTTAGTTACTCAAAGTCTCTACAAGTATAAATACAGGTCTTTCCTGAACTCACATTTCCTGTGACTTTTACAGGAACAGAGCCTGAGGAAACAAagggttaaattaaatatgaatgataCGAGCTAACAATGCATCTCAGTCTTTAATCATATGCATTATGTTAAAGTGATCCATCCAGGTTGACACGAATGTTTAGATAGTCGATGCATCTGAGGTTAATCACCTTTTGGATCTGCGTTTTCCAAAACACCTGGCTTTTTGTCGGACGCGCTTGAAAGTGAGACGACATTGGCAATGACTGGTGTGCCCTCTTTAGTACTTTGAGGAGCTGCAGAGGATACTGGGGTCACACCTGTGGAGACATTGACAGCGCAGGACTCCAGactaaagaaaatgaaacatttaggATGTAATAACTTTAGCTAATCAATTACAGAATCTACAGATGTAATGAAGACCGAATGGGACAAAAGCAGACCGATACACCCAAATATTTGGAAGAGGACATACCTTGTGTGGCTGTAGATTTATTTGAAACGACCCCAGTGATGCCCTGCAGACTGCAGAAGAACATCAGGCACCGAAGGCTGCAGAAATGCTTCATCTCACCCAGCCATTTCACAGTATCCGTTATCTTCTTGGCCTGCCTGCACATTGAGCACTTTACTTCCTGTAAAAAttgtgcagcagcagcattTACTGTTACTTTCGGAAACAATAACTAATCTTATATCAATATCTTGAGCGATATCCTAAGCGTAACGATGCAGCACAAAggtacttaaaaaaacaatatggtGAATTCTGCACCACGTCAGCTCAAACCATTTTCCTCCAGTTTCCTCCTTGGGACATTTTCCTGGTTGCATTTACATTGGCAGCAGGAACTCTGAAGTGGCGTACAGCTATGTCTTTATGTGCTGCATTTACAGACGTCAATAACCAGTGAATGCAGGACGACGTGATTGGTGCCGTTTTTCGCTTTGTGTTGTGGATTTTATGATAACggaaatgaaatatttgtgtttgagtggcttttttaaaatgctttttgtatgACCTTGGCCAATCAGTGTACACTAATATCACTGGCAGTTTCCATGGAACTATTTTAGAACCTACTCTGAAGCAGGAGCTCGTTTCGTCCTCAGAACTAAATCCGTTCCTGTGATGTGatcacaccaaaaaaaaactggttcTTTTGCCAATATTTCTAGAACTATATGAAGGTTCCACTTGTGCGAAAAATAAGGTCACTTATGTGAccccttttttgtctttttcttacTAATCTCATCAGcatataagaaaataattaagtaaCTATCCAAGTAACTGCATAACGGGATAACTAACcgaaaacaactaaaaatattaagtcGGTTTagttagtaaataaataactatgtAACCAAGTGGtaaataactacatttaagCAAGTAACCAACAACGTGAATAACTACATAAATAACTACGTAACTTAACAGCTAAATTctattgaataataaaatattacctgACGCATCAGTGAATTCTGTTTTAACAAGCAATCATTCCCGCAGAACTCCTCTTGCTTCCCGTCAAAGACATCAGTCACTACAGTCTTAGAAGTGCTGTTACAGTAAAAGCAGTTGCAACAGTGTTTCTTTCCCCAGCGTTTGAACAGGCTATGCTCAAAGAGAGTCTTGCATC

Function

NR:

description
PREDICTED: agrin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195451 True 2336 lncRNA 0.39 2 12178945 12181367

Neighbor

gene id symbol gene type direction distance location
LOC122323775 fam206a,LOC107670282,LOC107556369,LOC107556344,LOC107710376 coding downstream 592874 11584050 ~ 11586071 (-)
LOC122323869 NA coding downstream 682332 11490127 ~ 11496613 (-)
csmd2 csmd2,LOC107698986,LOC107663732 coding downstream 1060664 10876437 ~ 11118281 (-)
col8a2 col8a2,LOC107564494,LOC107710560,LOC107724334,LOC107565043 coding downstream 1450938 10637428 ~ 10728007 (-)
ptp4a2b LOC107564493,LOC107670276,LOC107653869,LOC105012508,LOC103042327,LOC108257240,LOC107710550 coding downstream 1542054 10617563 ~ 10636891 (-)
efcab1 efcab1 coding upstream 7915 12189282 ~ 12190901 (-)
LOC122323777 NA coding upstream 9671 12191038 ~ 12192305 (-)
LOC122323778 LOC107567967,LOC107722131,LOC107670237 coding upstream 16508 12197875 ~ 12199318 (-)
calcr calcr,LOC107669839,LOC107558586,LOC107712922,LOC107667776,LOC107567974 coding upstream 199077 12380444 ~ 12415751 (-)
tfpi2 tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578 coding upstream 239511 12420878 ~ 12423119 (-)
G132353 LOC107722138,LOC107566772 non-coding downstream 1539 12174563 ~ 12177406 (-)
LOC122323784 NA non-coding downstream 8097 12162615 ~ 12170848 (-)
G132336 sfpq,LOC107394926 non-coding downstream 54950 12123604 ~ 12123995 (-)
G132333 NA non-coding downstream 58347 12120347 ~ 12120598 (-)
G132332 NA non-coding downstream 112330 12066015 ~ 12066615 (-)
G132363 NA non-coding upstream 67014 12248381 ~ 12249423 (-)
G132398 NA non-coding upstream 152084 12333451 ~ 12379151 (-)
G132417 NA non-coding upstream 270917 12452284 ~ 12452705 (-)
G132428 NA non-coding upstream 287553 12468920 ~ 12471830 (-)
G132429 NA non-coding upstream 302249 12483616 ~ 12484168 (-)
G132292 NA other downstream 346038 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 422507 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1008032 11170270 ~ 11170913 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other downstream 1433816 10740374 ~ 10745129 (-)
ctnnal1 NA other downstream 1816418 10315621 ~ 10362527 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other upstream 254412 12435779 ~ 12438085 (-)
sem1 NA other upstream 416407 12597774 ~ 12669215 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 846450 13027817 ~ 13029349 (-)
G132733 NA other upstream 1103164 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 1313463 13494830 ~ 13502370 (-)

Expression


Co-expression Network