G132376


Basic Information

Item Value
gene id G132376
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12378273 ~ 12397361 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195480
ctgaaaacacaatAGTCGTCAGTGACATCTCCAATATAAGCAATagacactttaaaaacatgagCAAGAATTGTAACTTTTTGACTTCAAACTCATAACTGTAGCTCAAACAAGCTTAATGGCTGGCTGTATTTACACCATGATAAATCAATTTCACGTTTGACTAAAACAATTACATGGTAAATACCAAGTCCAAGATACTGACACAACTCACAATGAATGACCCAACTTCACAATTTCACCTCAAACCTTGAAACACGACACACTATGTACAGCTAAAcatctcttttaaataaaagtacagtgTTGTAgtccaaagtaaaaaaaaataaacatttcgtacagaaaaaaagacaggcTTGTGTCCAGAATGTTGTTGTACTGAATACATAAATTCACATTGTTAGGAAATGTGAGCATTCCTGTACTGTAAATCCTTAACTTGATTTTTGCAAGTGATCTTTAAATGATTAGGTGTTTGATTCTCGTTTAGTAGACGCTGATGcagttatataaaaaacactTGCATTGTAGTTGCACATGTGTATTGTTAACTGTGTAAGTTGTTACTGCATTCTTGTGACAGGCAATGCAAACTCTGTGACAGCTGTCTGTCATCGCATGCATCCCAGACGCAGCTGATTTCAGCCAAGAGGGTCTTGTTATCCTCTGCTGTCCAGCCTACACGCgctttaaaatactgtatgtggACGTGCTGTTCTGCGTTTATTGCAGTAAACACCAAAGTATTTCTGTGGATATTATTTCTTCAGGCATGGGttgctttgatttgaataacATTTGCAAACCTACAttatatgtgcatatgtgtatatttatgtatgtatgtatgcatgtatcaCTAGCAGTTAAAACCTTTGTGGTCAAtgagatttttatatatatatatatatatgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195480 True 935 lncRNA 0.35 2 12378273 12397361

Neighbor

gene id symbol gene type direction distance location
vps50 si:ch211-287b5.1,LOC107669849,LOC107722151,LOC107712924,LOC107667773 coding upstream 11224 12264953 ~ 12367049 (+)
hepacam2 LOC107669863,LOC107722158,LOC107667766,LOC107558577,LOC107712921 coding upstream 114494 12253846 ~ 12263779 (+)
fam133b fam133b,LOC107567972,LOC107669879,LOC107722159,LOC107712925 coding upstream 124571 12249970 ~ 12253702 (+)
cdk6 cdk6,LOC107567973,LOC107722162,LOC107667775,LOC107558583 coding upstream 132528 12216965 ~ 12245745 (+)
rbm48 LOC107670247,LOC107722129,LOC107566766,LOC107548761 coding upstream 188249 12186641 ~ 12190024 (+)
zgc:85777 zgc:85777,LOC107669823,LOC107593525,LOC107731711,LOC107722154,LOC107667771,LOC107558587,LOC108257226 coding downstream 28239 12425600 ~ 12436108 (+)
col1a2 col1a2,LOC107722140,LOC107669816,LOC107667770,LOC107591591,LOC107731699 coding downstream 71555 12468916 ~ 12485713 (+)
casd1 casd1,LOC107722141,LOC107665666,LOC107669810,LOC107731667,LOC107591593 coding downstream 90420 12487781 ~ 12497132 (+)
ppp1r9a ppp1r9a,LOC107669756,LOC107722146,LOC107731638 coding downstream 107077 12504438 ~ 12548839 (+)
asb4 asb4,LOC107722148,LOC107670212,LOC107731816,LOC107665668,LOC107577102 coding downstream 154722 12552083 ~ 12556127 (+)
G132317 NA non-coding upstream 128850 12248771 ~ 12249423 (+)
G132318 NA non-coding upstream 130528 12247544 ~ 12247745 (+)
G132301 NA non-coding upstream 178578 12197677 ~ 12199695 (+)
G132311 NA non-coding upstream 185909 12190738 ~ 12192364 (+)
G132305 NA non-coding upstream 262919 12114759 ~ 12115354 (+)
G132421 sgce,LOC107722147,LOC107731676,LOC107665667 non-coding downstream 101781 12499142 ~ 12500541 (+)
G132448 NA non-coding downstream 159603 12556964 ~ 12557202 (+)
G132472 NA non-coding downstream 269932 12667293 ~ 12668554 (+)
G132498 LOC107593576,LOC107731729,LOC107706171,LOC107696598 non-coding downstream 389283 12786644 ~ 12865595 (+)
LOC122323456 NA non-coding downstream 434280 12831641 ~ 12834525 (+)
LOC122323774 NA other upstream 265376 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 854392 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 1960177 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 2624717 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 2739312 9636973 ~ 9638961 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 25929 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 624056 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 912066 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 2390183 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 2437240 14834601 ~ 14837969 (+)

Expression


Co-expression Network