G132398


Basic Information

Item Value
gene id G132398
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12333451 ~ 12379151 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195506
AAGGTTTTAACTGCTAGtgatacatgcatacatacatacataaatatacacatatgcacatataaTGTAGGTTTGCAAATgttattcaaatcaaagcaaCCCATGCCTGAAGAAATAATATCCACAGAAATACTTTGGTGTTTACTGCAATAAACGCAGAACAGCACGTccacatacagtattttaaagcGCGTGTAGGCTGGACAGCAGAGGATAACAAGACCCTCTTGGCTGAAATCAGCTGCGTCTGGGATGCATGCGATGACAGACAGCTGTCACAGAGTTTGCATTGCCTGTCACAAGAATGCAGTAACAACTTACACAGTTAACAATACACATGTGCAACTACAATGCAagtgttttttatataactgCATCAGCGTCTACTAAACGAGAATCAAACACCTAATCATTTAAAGATCACTTGCAAAAATCAAGTTAAGGATTTACAGTACAGGAATGCTCACATTTCCTAACAATGTGAATTTATGTATTCAGTACAACAACATTCTGGACACAAgcctgtctttttttctgtacgaaatgtttatttttttttactttggacTACAAcactgtacttttatttaaaagagatgTTTAGCTGTACATAGTGTGTCGTGTTTCAAGGTTTGAGGTGAAATTGTGAAGTTGGGTCATTCATTGTGAGTTGTGTCAGTATCTTGGACTTGGTATTTACCATGTAATTGTTTTAGTCAAACGTGAAATTGATTTATCATGGTGTAAATACAGCCAGCCATTAAGCTTGTTTGAGCTACAGTTATGAGTTTGAAGTCAAAAAGTTACAATTCTTGctcatgtttttaaagtgtctATTGCTTATATTGGAGATGTCACTGACGACTattgtgttttcagaaaaaaaaaaaaatt

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU195506 True 894 lncRNA 0.35 2 12333451 12379151

Neighbor

gene id symbol gene type direction distance location
LOC122323778 LOC107567967,LOC107722131,LOC107670237 coding downstream 134133 12197875 ~ 12199318 (-)
LOC122323777 NA coding downstream 141146 12191038 ~ 12192305 (-)
efcab1 efcab1 coding downstream 142550 12189282 ~ 12190901 (-)
LOC122323775 fam206a,LOC107670282,LOC107556369,LOC107556344,LOC107710376 coding downstream 747380 11584050 ~ 11586071 (-)
LOC122323869 NA coding downstream 836838 11490127 ~ 11496613 (-)
calcr calcr,LOC107669839,LOC107558586,LOC107712922,LOC107667776,LOC107567974 coding upstream 1293 12380444 ~ 12415751 (-)
tfpi2 tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578 coding upstream 41727 12420878 ~ 12423119 (-)
sgce sgce,LOC107731676,LOC107722147,LOC107665667,LOC107669779 coding upstream 118077 12497228 ~ 12508605 (-)
pdk4 pdk4,LOC107722149,LOC107669734,LOC107591595 coding upstream 179760 12558911 ~ 12568503 (-)
LOC122323727 slc25a13,LOC107665658,LOC107593530,LOC107731765 coding upstream 240632 12619783 ~ 12657157 (-)
G132363 NA non-coding downstream 84028 12248381 ~ 12249423 (-)
G132334 LOC107669930,LOC107722137,LOC107706594,LOC107566770,LOC107558579,LOC107655760 non-coding downstream 111498 12121405 ~ 12221953 (-)
G132329 zmym4 non-coding downstream 151308 12159701 ~ 12182143 (-)
G132355 NA non-coding downstream 152084 12178945 ~ 12181367 (-)
G132353 LOC107722138,LOC107566772 non-coding downstream 156045 12174563 ~ 12177406 (-)
G132417 NA non-coding upstream 73133 12452284 ~ 12452705 (-)
G132428 NA non-coding upstream 89769 12468920 ~ 12471830 (-)
G132429 NA non-coding upstream 104465 12483616 ~ 12484168 (-)
G132436 NA non-coding upstream 131835 12510986 ~ 12511332 (-)
G132437 ppp1r9a,LOC107722146,LOC107669756,LOC107731638 non-coding upstream 133966 12513117 ~ 12525593 (-)
G132292 NA other downstream 500544 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 577013 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1162538 11170270 ~ 11170913 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other downstream 1588322 10740374 ~ 10745129 (-)
ctnnal1 NA other downstream 1970924 10315621 ~ 10362527 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other upstream 56628 12435779 ~ 12438085 (-)
sem1 NA other upstream 218623 12597774 ~ 12669215 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 648666 13027817 ~ 13029349 (-)
G132733 NA other upstream 905380 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 1115679 13494830 ~ 13502370 (-)

Expression


Co-expression Network