G132579


Basic Information

Item Value
gene id G132579
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12577995 ~ 12580817 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195810
GGTCTCATTTGTTTATTAACACAGTGCATTATccattgtttacatatatagaatttttgatcttaaaaatgtattaacaggaaaattaaaatgaatacaaagcAGTGCATCACCTGATTTCGAAAATTGAGATTCTGGTCTTTCTGTCCCCAAATTTAAGACCTCTTAAAAATGAAGACTTTCATACaatttcagacattttatgGCCTTCAATTTGAAACACTTTTTAAGGGCCCGCCAGAACCCCaatcaaaatgtttacattactattaagtaaagtgttacaattttatgaaacatttaaaaatgcacatcttCAACCATCGTAGAGGGCATTTTGCAACCTAATCAGGTTAATTTGAACTTAATCAAACTACATGCTGGCTGCTGCTGGTACAAGAGTCTCTGCAGGCACTGCTGGCCTTCATGATAGTGTTATAGTGCAGTCTCACGAGGGCAAACACCTGGGCGGTTCTTGCATCCCCCAActcagagaaaaagagagagagagagagggtcagagagaaaaaaaaagtaagaaaaggaaaaaaggcaTCTGTTTAGTTTCACCAATCAATGGAAGAAACCTCTGCACTGGcctgaacaaacacagaacGCAAGTTGTAGCAGGTGGTGGAAAGAGCTATTAAaacttcctctctttctcatgTGAGAGGTCTCGCAGGGGCAGGGTCTCCCCTGGACAGACAACCTGTACCTACAGACAGCTGTGGGCTCAACCTGCATTTTCAGGCCCgagaggaaaaaacaaataaactgtaCAGAGTGCGATCGCTAAGGGCAACGGCCAATCAAAGGCTTGTCAGTGGTTgcacttgctgaataaatgacCTGCCTTGACAGGAAATTCCACCAGCAATTTTAATTCTGATCAGGCTTCAAGGAAGTggaaagaataaaaacacatcagtTATAATGACAGGAAGTCTCCAATCACATGGCAAGCAGCTGTTGCCAGCGTAGGGATCAAGGAGCCATGAGAGGATGGAGGGATTCTGGTGTGAAATGCAGATGGAAAGAAGAAGATGAGAAGGTGGGGAACAAGAGCGGCGAGGTAAAGCCTGCGTTTCGCAAAACACTCGTTCTGAGTGCACCGCTTGCAGGTTTAAAAGCCAAATCAGAGGAAACCAAAGAGCAAAAGCTGTGCTTCACATCACAACTACCAGCGATGTTATGCTAATACACCGAAAGCTGCTTGTTAGGGGGTCCCGTCCATATGGAGATGTTTAGGGTGCTTTTCAAACCATCTGCATTTTATACCAGGCCTGGCTCCCGAGTCTGGGGGATGCAATCAAATTAGCCGAGCTCTATGTGAGCTTCATTTTAACAAGgctataaatttaaaaatgtaattgaaatatGACACTTTAAATATGATTGGCTTCAGATATATGATTGAAGCCAATGGAGTACATTAGAGTACACTTGTGGAAGAGGGCGGCTCAGAGCTGACTGCTGTGTCGAGTTAACGAATGGAGAAGCCAAGAAGTCTTTGTGGTAGGAACCACACTTAAACTAATAAGGAGAAATATCCTGACATTATTCTTTTACAAACAAGCAGAAGTGGCTTTGATTAAGCACTTTCACATTTCATAAATCAATCAGCTCGAGGAGTTTTATTAATACTGTATCGTGTTACACGAGGTTACCATTTAACCATTTAGAGTTGTActcttttaaatttcaacaaaaaGGAAGGTCGATGATGATATTTCACTCtatccttttatttttagaacatCCAAGAACATGGGTTTAAGTGACGTTTTGAATattgttactttaaataatattgcCATTGTATTTACAGTTAACAccagaaaaaatgtgttttgatttttcTAGCTGATTCATTTCTACTGGTTActattgaaaatgttattttttatctcttttttggctaaaataaaaaagtgaatatattttgtgagatatctgaattaaaaaaatctaacataCAGAAAATCCTGACTTTCAAAGAGGCAGTTCgcttaaaaatgaacattctatCAATATAAGGcgttttgatttttttggtcCAAACTAAACTTTTGTTtaacaatattcaaaatattaccaACATTTCTTTGTTCCAGAAGAAAGAGCAGCCGGTTTATAACAACTTAAGTGTGAATAAATGGTGACAGAACTTAGTTGCGTGAAATATCCCAGCATAGTACTATTTAGAAATTGGTCTACAAAGGATTCACCTACAACACTCAATCTTTTGAAATGCCATGCACACCTGAACTGATAGTGGACCCGACAATCTCAacagaaagggaaaaaagtAAACTGGTAGCCCTCCACAGAAACGCAGGCACAACTCCAAGTGATGTTCCGATGATAGAAGCCATCTTGAATTACCCGTCTGCATCCACTTAAAGCCTGACTCAATGCCGTTACTGTTCTGCCATTTCAAGCAGAGCCACTGATGGGCAGGCATCTCTTTTCAAAAAAAGCCGCCCCTAACTCCCCTCTCAGGAAATGGAGGCCGCGGCTGGTCAAATGAATCTTAATCTGCACAGGTTTGGAGCTCTTCAACGGAACCAGACGGTCAGGATGACAGCCCACCTGACGGCGATGAAAGTCAAAGCTCTTCACGGAGCAGCCCGTTTCGATTTCAGAGCTTGTCCTAAGCTGTTTTACCATGAAATCCCAAATTGTCTATTTTGATTGAATACAGataaaactacataaataaGTTATTGTAGATGTTAACAGTGATTGACAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195810 True 2757 lncRNA 0.40 2 12577995 12580817

Neighbor

gene id symbol gene type direction distance location
pdk4 pdk4,LOC107722149,LOC107669734,LOC107591595 coding downstream 9492 12558911 ~ 12568503 (-)
sgce sgce,LOC107731676,LOC107722147,LOC107665667,LOC107669779 coding downstream 69390 12497228 ~ 12508605 (-)
tfpi2 tfpi2,LOC107722157,LOC107670228,LOC107731825,LOC107667768,LOC107558578 coding downstream 154876 12420878 ~ 12423119 (-)
calcr calcr,LOC107669839,LOC107558586,LOC107712922,LOC107667776,LOC107567974 coding downstream 162244 12380444 ~ 12415751 (-)
LOC122323778 LOC107567967,LOC107722131,LOC107670237 coding downstream 378677 12197875 ~ 12199318 (-)
LOC122323727 slc25a13,LOC107665658,LOC107593530,LOC107731765 coding upstream 38966 12619783 ~ 12657157 (-)
dlx5a dlx5,dlx5a,LOC107670186,LOC107591663,LOC107665662,LOC107736572 coding upstream 122775 12703592 ~ 12705647 (-)
chrac1 chrac1,LOC107580926,LOC107591666,LOC107669723,LOC107722130 coding upstream 145695 12726512 ~ 12727814 (-)
gnrhr1 LOC107722165,LOC107593587,LOC107670170,LOC107731798,LOC107591668,LOC107665657 coding upstream 198234 12779051 ~ 12786005 (-)
trioa LOC107696598,LOC107706171 coding upstream 282008 12862825 ~ 12942047 (-)
G132580 NA non-coding downstream 4454 12570941 ~ 12573541 (-)
G132455 NA non-coding downstream 21350 12556258 ~ 12556645 (-)
G132445 NA non-coding downstream 26490 12548529 ~ 12551505 (-)
G132444 NA non-coding downstream 29825 12546492 ~ 12548170 (-)
G132443 NA non-coding downstream 33283 12543892 ~ 12544712 (-)
G132602 NA non-coding upstream 106986 12687803 ~ 12701078 (-)
G132603 dlx6,LOC107591662,LOC107665660,LOC107665661,LOC107670195,LOC107731755 non-coding upstream 119105 12699922 ~ 12722428 (-)
G132627 NA non-coding upstream 210740 12791557 ~ 12829799 (-)
G132637 NA non-coding upstream 274237 12855054 ~ 12857406 (-)
G132642 NA non-coding upstream 279399 12860216 ~ 12930455 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other downstream 139910 12435779 ~ 12438085 (-)
G132292 NA other downstream 745088 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 821557 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1407082 11170270 ~ 11170913 (-)
trappc3 trappc3,LOC107653823,LOC107565048,LOC107564495 other downstream 1832866 10740374 ~ 10745129 (-)
sem1 NA other upstream 16957 12597774 ~ 12669215 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 447000 13027817 ~ 13029349 (-)
G132733 NA other upstream 703714 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 914013 13494830 ~ 13502370 (-)
G132785 NA other upstream 926847 13507664 ~ 13508453 (-)

Expression


Co-expression Network