G132637


Basic Information

Item Value
gene id G132637
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12855054 ~ 12857406 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195897
TCACACTCAAACTATGGCTGCTTTAAAAGCCAAATTACTTAATATCCCACAAGCTCACCCAAACATCTTGTTCCCTCACAGATCAAAGTGAAATCAAAGTGACAACTACTAATTGTATCGCAGTTCAAATAAGCTCAGAACCACGTGGCATAAAGACCTATTGTTTAAAAGGAGCAAACTTTTTTGGGTGGGTCCCCGCAGCAACCCTCCCGAGGACAGCCAtattggcatgaaagaaaaatcagtCAGGTTCAACTTTCTGGAAAACACTGCGTTATACAAATTACTTGCACCTTCTCACACTTTGGGTTTTTCCAGACATTACTAGAAGATCCTAAGCAGTAAACATAGTCTAATGAACACACACTCCTGCACATGAAGACTATCTTTTCATCTCCTGTTTCCCAATATAAGCCAGAGGTTAGGCAGAATTTCTGCGGAGATTAGAAGTGAAATTTGGCATAAACCCAATGCTCCCTCTCGTCTGGAACAATACAACTGAAAACTGGCACAGGATCATGGACCTTTTCTGAACAATGTACAAACACCCTGATCATATAACTGCAGGggatttttcttaaaaactcACTCCGcatatattttaggttttttgtttaaattaaatgccaAACCTCTGTGGCGACTAATACAGCATAGGCTGATCATTGCTGACTGGATTAACGCTCATTAGGCATGTGCTTTTTACTATTCTATCGTCTGGCTCATAGTATTgtgcagatacacacacacacacacacacacacacacacttctacaGAAATCCATACCTTGCACGGGGCCATTATCCATAATCTCTTTCATAATCTCATTCTCCTGTGAGTGGAAAAGCAACAAGTGAGTTTAGTTAACAGCATACTCTAGcctaatgctatttttaaactgcaaatTCTGCATTCTCCATGaaaagaaatatgcatttataataaaatgactaaaataatggggttttttttacatacagtacAAGCAGTCTGACGACGTATGggtaaaacatttctgtattccatatacattttcatatacagTATTACTACACtgaattgtttaattgttcatCGCATTCCATATTCACATCTGTGAACGATATATGATCTAAAACATGCCTAGAGACATATATATGAGCTAGACTGTGCCTTAAATAAGACAAATGGGTGGTAAGATATGGCTCAGAGAGAGAATACGTTCAACCATGACATGACTGCTAATGTAATGCCTCTCCAGACAGTTGAGAGTTATTCCTCCCTTTGGCTTTGAGTTGAAGGGTTTTGACTGATGAAGAAATTGAACACAGAAAAGCACACAGATGCTGGGTGTGAGggaaaaaacataaatccccGATGCTTTAACCATTGGTATTACAGTATGCGGGCAGAGGTCTGCATGTCTTACAGAGAAAATAATTCTAACGTGTCAGAACAAACAGGCTGACAGAAACATCCTAGATAAAGTTCCTTTTTGTAAGTTAATAAGAGTAATTAGGGCCTGAACTGAAAGTACGGTACTAAAGCACTGGGACAATTTTACGCGAGCTATTTCTCAGTAGGCTACCATTTAAAGGGTTGCATTCGCACCGAGAGTGGGCACTAAGTAGTGACGTGAGCCTTGTGGGCGGcgttcaccaaaaataaaacaaagattaatatCTTGAAGAAAAGGAAAACTTTAGACCAAAAGGGATGCTGTGGTTGgagctgtgtttttgttgtgtctTTTGGGATTCACAATAATGGACATGGAATGCTGACGTATACATGATTAACAGAACGGAAAGTCAACTGGCAGTGCTACATGTCATTGtttaaaagttgttCCTAGTTCCTGTGGTGCTAACATGCCAAAAAGTGGGTAGCACCACAAATTGGTTCGGGGTACTATGAAATAATTACTGTGGTGCAAAAGGCCCTATTGTCATTTTCTAAAAGAAACAGATCTTCTGCTTGATTTGAGACATCAGCTGACTTACATTGGAGGACAATCTGTATGGTGGGGTTGACTGGTAGATATCATTGTTGTAGCTGTGGCTGTTGGGACAGTGCGCTGTGGCTTGCCTCTTTCCTCGGCCCACCGCTCGACTTTGCATCATACAGCGAGCCACTTCAGCAGGACTTTGCTGGGGCTTAGAAAAAGGATAACACTCCTCTGTCACGACC

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU195897 True 2171 lncRNA 0.40 2 12855054 12857406

Neighbor

gene id symbol gene type direction distance location
gnrhr1 LOC107722165,LOC107593587,LOC107670170,LOC107731798,LOC107591668,LOC107665657 coding downstream 69049 12779051 ~ 12786005 (-)
chrac1 chrac1,LOC107580926,LOC107591666,LOC107669723,LOC107722130 coding downstream 127240 12726512 ~ 12727814 (-)
dlx5a dlx5,dlx5a,LOC107670186,LOC107591663,LOC107665662,LOC107736572 coding downstream 149407 12703592 ~ 12705647 (-)
LOC122323727 slc25a13,LOC107665658,LOC107593530,LOC107731765 coding downstream 197897 12619783 ~ 12657157 (-)
pdk4 pdk4,LOC107722149,LOC107669734,LOC107591595 coding downstream 286551 12558911 ~ 12568503 (-)
trioa LOC107696598,LOC107706171 coding upstream 5419 12862825 ~ 12942047 (-)
si:ch211-191i18.4 NA coding upstream 168690 13026096 ~ 13027361 (-)
si:ch211-191i18.2 NA coding upstream 177091 13034497 ~ 13044432 (-)
plekho1a plekho1a,LOC107669580,LOC107706150,LOC107593546,LOC107696529,LOC107591669 coding upstream 209102 13066508 ~ 13077397 (-)
vps45 vps45,LOC107706151,LOC107591611,LOC107593545,LOC107731364,LOC107670145,LOC107696588,LOC103374652 coding upstream 222643 13080049 ~ 13086017 (-)
G132627 NA non-coding downstream 25255 12791557 ~ 12829799 (-)
G132603 dlx6,LOC107591662,LOC107665660,LOC107665661,LOC107670195,LOC107731755 non-coding downstream 132626 12699922 ~ 12722428 (-)
G132602 NA non-coding downstream 153976 12687803 ~ 12701078 (-)
G132579 NA non-coding downstream 274237 12577995 ~ 12580817 (-)
G132580 NA non-coding downstream 281513 12570941 ~ 12573541 (-)
G132642 NA non-coding upstream 2810 12860216 ~ 12930455 (-)
G132645 NA non-coding upstream 113140 12970546 ~ 12984432 (-)
G132662 NA non-coding upstream 174431 13031837 ~ 13032126 (-)
G132664 NA non-coding upstream 188967 13046373 ~ 13046623 (-)
G132665 NA non-coding upstream 197379 13054785 ~ 13059310 (-)
sem1 NA other downstream 185839 12597774 ~ 12669215 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other downstream 416969 12435779 ~ 12438085 (-)
G132292 NA other downstream 1022147 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 1098616 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1684141 11170270 ~ 11170913 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 170411 13027817 ~ 13029349 (-)
G132733 NA other upstream 427125 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 637424 13494830 ~ 13502370 (-)
G132785 NA other upstream 650258 13507664 ~ 13508453 (-)
G133132 NA other upstream 1926782 14784188 ~ 14784423 (-)

Expression


Co-expression Network