G132642


Basic Information

Item Value
gene id G132642
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12860216 ~ 12930455 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU195903
ttttttatttttttttaaAAGTGGGCTGTAGGACTTTTATTGCGTCACACGGATGAACACTACAGTGGTTTGCATTGACAATACGAGGAACAACATTGCACAGTAGTAACCAGCGATTTACAAACAGACTTTGTTCTTAAATAACACAgcattaattcataattacagAACTGGAAGACAGAATTGAAGAATTTCAGCTTGGGCTCAAATCAGTGTATAACATGAACCGTAATGTAAAATCTAGCGATATCAAGGCATTGAATATTCATGACACAATCCCATATGCTGGACTCATTTGGCTGCATATAACTGCTTTATCTTAATAGAAACTTCTTGCATGACTAATAGAGAACACATTTCACCGAATGCTAATGGACCAGTGGGCAGAATATAGCATCTGTTGCTGGCTTTATACTGAAAGACCCCCCCGTCTTCCTATCTGAGACTGTGTATTGCTAAATCAAATGCCTGTCATAAGGCTTTTGAATTAGTCATGTCACCATAATAACgacattatcattatcaaagTCAGCAGATGGGATTGCTTGGAGCTCTGGTGCATGCATGCTATTATAGTTTGCAATGTTTTAGGCCCTATCAGCAATAGCTGTCTCAAGCTTATTAACGCATACTAATCTCCATATACGTGTAGATGGATATTTGAAAAGCAAACATGCCCTATGATGTCTTGTAATATCGCGTTTTGCCTGGTTTACGCAGCAAGACAGTAGTAATTCAGCACTGAACCCGAACCCGTGTGCAGTTTGCcccacttttaaaaatgtcatttaagattttttcctttttatgtaaatgaataacaaatattttttttaaatactaatggTAATAgtaatcaattaaataattcaacaaaacagacaagaacaaaaaaataaggtttATGTCAATCTTTGTGTACAATCTTATTAGTTCACAGAGTACAATAGCTTAAGACTTGAGCAGATTTTGTTCTTACACGGAATCTGTGGTATTTAGATATTTTCTGAGCAATACAGCCAACACATAACAGTTTCAACCGAAGTTTCTAGAGTGAGTATCAGTGTCTGTATCTGTACAGTCATCCTTTAACTTGAATCTGACTTTGAAATAAAGACTGGAGTgggtttaaaatgctttaaacaacCTTAACCTCAATGGAATGCAGAGAACTGTTATAAATCTAATCTAGGttatttttggaataaattatTGGTCCTAAAACCTTCTTCCGCCATCCTTCTATCCTTTCAGCAGAACGCATGGAGTGCTGTCTGACTGTCTGCCTTGGTGTGTAACGATTCCCGAATgtaggaaaaaatacaaaacaaaagacacatCCTAATATATCACTCTATTAGACATTTGAGACAATTACATTGTGATGCTGAGCGCATGTGTGCCTGTGGAGTGTGTCTTTGGAGTAGAGTCCTGAGTGCATCTGAGTCCTGCGGCTGTGGCTGTTATTTGAGGTCCAGTCAGGGAGTGTATCAAGCCGGTTTCCACCAATAAGACGATATAGGGCTTATACACAAACTGGAGATTTACATTCCTCCGGACCAAAACTCCAGTGGAGACGTGCATTTGGACAGAGGGGGGCAGTGGACACCACTTTTTACGCATATGGTGTGAAAAGATATTCAGAAGGCACCGGGGTTTGGTGGAAATCAGACTCTAACAAACCTGCAAAAGACCCGATTAACTTTTAAATCATAGAGCGAGGCGTACACTGCACATCTCTACTTGCGGCGTCCGTGATGGTTGTGCATGTCTTCCATTGTGACTCTGCCCCAGACGCCGATCACGAAAGCCTCGATCTCGCACTCATTTACGCCACGAGCGATTCGGAAGTAACCGTCCTCGCCCCAGTTCTTCCCCCATGAGTTAGCTGCAA

Function

GO:

id name namespace
GO:0004962 endothelin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195903 True 1894 lncRNA 0.40 2 12860216 12930455

Neighbor

gene id symbol gene type direction distance location
gnrhr1 LOC107722165,LOC107593587,LOC107670170,LOC107731798,LOC107591668,LOC107665657 coding downstream 74211 12779051 ~ 12786005 (-)
chrac1 chrac1,LOC107580926,LOC107591666,LOC107669723,LOC107722130 coding downstream 132402 12726512 ~ 12727814 (-)
dlx5a dlx5,dlx5a,LOC107670186,LOC107591663,LOC107665662,LOC107736572 coding downstream 154569 12703592 ~ 12705647 (-)
LOC122323727 slc25a13,LOC107665658,LOC107593530,LOC107731765 coding downstream 203059 12619783 ~ 12657157 (-)
pdk4 pdk4,LOC107722149,LOC107669734,LOC107591595 coding downstream 291713 12558911 ~ 12568503 (-)
si:ch211-191i18.4 NA coding upstream 95641 13026096 ~ 13027361 (-)
si:ch211-191i18.2 NA coding upstream 104042 13034497 ~ 13044432 (-)
plekho1a plekho1a,LOC107669580,LOC107706150,LOC107593546,LOC107696529,LOC107591669 coding upstream 136053 13066508 ~ 13077397 (-)
vps45 vps45,LOC107706151,LOC107591611,LOC107593545,LOC107731364,LOC107670145,LOC107696588,LOC103374652 coding upstream 149594 13080049 ~ 13086017 (-)
zgc:153441 zgc:153441,LOC107706178,LOC107591613,LOC107696589,LOC108426183 coding upstream 156105 13086560 ~ 13089430 (-)
G132637 NA non-coding downstream 2810 12855054 ~ 12857406 (-)
G132627 NA non-coding downstream 30417 12791557 ~ 12829799 (-)
G132603 dlx6,LOC107591662,LOC107665660,LOC107665661,LOC107670195,LOC107731755 non-coding downstream 137788 12699922 ~ 12722428 (-)
G132602 NA non-coding downstream 159138 12687803 ~ 12701078 (-)
G132579 NA non-coding downstream 279399 12577995 ~ 12580817 (-)
G132645 NA non-coding upstream 40091 12970546 ~ 12984432 (-)
G132662 NA non-coding upstream 101382 13031837 ~ 13032126 (-)
G132664 NA non-coding upstream 115918 13046373 ~ 13046623 (-)
G132665 NA non-coding upstream 124330 13054785 ~ 13059310 (-)
G132674 LOC107670044,LOC107706180,LOC107593577 non-coding upstream 174424 13104879 ~ 13105591 (-)
sem1 NA other downstream 191001 12597774 ~ 12669215 (-)
bet1 bet1,LOC107669829,LOC107722155,LOC107731720 other downstream 422131 12435779 ~ 12438085 (-)
G132292 NA other downstream 1027309 11832173 ~ 11832907 (-)
LOC122323871 ctnnal1,LOC107724361,LOC107670281,LOC107653856,LOC107710384 other downstream 1103778 11709923 ~ 11756438 (-)
G132219 LOC105418166,LOC101068103,LOC105418794,LOC108431938,LOC108412963,LOC105419408,LOC108415465,LOC106522608 other downstream 1689303 11170270 ~ 11170913 (-)
cart4 cart4,LOC107706148,LOC107591606,LOC107593588,LOC107731457,LOC107696592,LOC107670162 other upstream 97362 13027817 ~ 13029349 (-)
G132733 NA other upstream 354076 13284531 ~ 13285461 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other upstream 564375 13494830 ~ 13502370 (-)
G132785 NA other upstream 577209 13507664 ~ 13508453 (-)
G133132 NA other upstream 1853733 14784188 ~ 14784423 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G230463 NA non-coding CI01000054 null 1858188 ~ 1971861 (+)